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Protein Homology/analogY Recognition Engine V 2.2 |
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Fold library id | PDB Header | Molecule | Title |
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c1se9A_ | PDB header: plant protein | Chain: A: PDB Molecule: ubiquitin family; | PDBTitle: structure of at3g01050, a ubiquitin-fold protein from2 arabidopsis thaliana |
Added to library: Tue Mar 16 13:15:18 2010 | |
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Links to external resources | |
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  | 1 | . | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 |
Sequence | E | A | E | V | H | N | Q | L | E | I | K | F | R | L | T | D | G | S | D | I | G | P | K | A | F | P | D | A | T | T | V | S | A | L | K | E | T | V | I | S | E | W | P | R | E | K | E | N | G | P | K | T | V | K | E | V | K | L | I | S | A | G | K | V | L | E | N | S | K | T |
Predicted secondary structure | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ||||||||||||||||||||||||||||||||||||
SS confidence | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Known secondary structure (DSSP) | S | S | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | T | T | S | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | T | T | B | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | S | T | T | S | S | S | S | G | G | G | ![]() | ![]() | ![]() | ![]() | ![]() | T | T | ![]() | ![]() | T | T | S | B |   | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . |
Sequence | V | K | D | Y | R | S | P | V | S | N | L | A | G | A | V | T | T | M | H | V | I | I | Q | A | P | V | T | E | K | E | K | |||||||||||||||||||||||||||||||||||||||
Predicted secondary structure | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
SS confidence | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Known secondary structure (DSSP) | G | G | G | G | S | T | T | S | T | T | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | S | S |
Download: | PDB structure | FASTA sequence |
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