Secondary structure and disorder prediction

		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60
Sequence		M	L	A	F	C	R	S	S	L	K	S	K	K	Y	I	I	I	L	L	A	L	A	A	I	A	G	L	G	T	H	A	A	W	S	S	N	G	L	P	R	I	D	N	K	T	L	A	R	L	A	Q	Q	H	P	V	V	V	L	F	R
Secondary structure
SS confidence
Disorder		?	?	?	?	?	?	?	?	?	?	?	?	?																				?	?			?	?	?	?	?	?	?	?	?
Disorder confidence
		.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120
Sequence		H	A	E	R	C	D	R	S	T	N	Q	C	L	S	D	K	T	G	I	T	V	K	G	T	Q	D	A	R	E	L	G	N	A	F	S	A	D	I	P	D	F	D	L	Y	S	S	N	T	V	R	T	I	Q	S	A	T	W	F	S	A
Secondary structure
SS confidence
Disorder						?	?	?	?	?	?	?	?	?	?	?	?	?	?																			?		?		?	?																		?
Disorder confidence
		.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180
Sequence		G	K	K	L	T	V	D	K	R	L	L	Q	C	G	N	E	I	Y	S	A	I	K	D	L	Q	S	K	A	P	D	K	N	I	V	I	F	T	H	N	H	C	L	T	Y	I	A	K	D	K	R	D	A	T	F	K	P	D	Y	L	D
Secondary structure
SS confidence
Disorder		?	?	?	?	?	?	?																																												?	?	?	?	?	?
Disorder confidence
		.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200
Sequence		G	L	V	M	H	V	E	K	G	K	V	Y	L	D	G	E	F	V	N	H
Secondary structure
SS confidence
Disorder																?		?	?	?	?
Disorder confidence

Confidence Key
High(9)											Low (0)

?	Disordered
	Alpha helix
	Beta strand

Domain analysis

Hover over an aligned region to see model and summary info

Please note, only up to the top 20 hits are modelled to reduce computer load

Rank Aligned region

PDB 1ujc chain A Region: 56 - 187 Aligned: 128 Modelled: 132 Confidence: 99.9% Identity: 14% PDB header:hydrolase Chain: A: PDB Molecule:phosphohistidine phosphatase sixa; PDBTitle: structure of the protein histidine phosphatase sixa2 complexed with tungstate Phyre2 PDB 2a6p chain A Region: 52 - 194 Aligned: 143 Modelled: 143 Confidence: 99.9% Identity: 17% PDB header:structural genomics, unknown function Chain: A: PDB Molecule:possible phosphoglycerate mutase gpm2; PDBTitle: structure solution to 2.2 angstrom and functional characterisation of2 the open reading frame rv3214 from mycobacterium tuberculosis Phyre2 PDB 3c7t chain B Region: 55 - 180 Aligned: 126 Modelled: 126 Confidence: 99.9% Identity: 21% PDB header:hydrolase Chain: B: PDB Molecule:ecdysteroid-phosphate phosphatase; PDBTitle: crystal structure of the ecdysone phosphate phosphatase, eppase, from2 bombix mori in complex with tungstate Phyre2 PDB 3d4i chain D Region: 54 - 176 Aligned: 123 Modelled: 123 Confidence: 99.9% Identity: 20% PDB header:hydrolase Chain: D: PDB Molecule:sts-2 protein; PDBTitle: crystal structure of the 2h-phosphatase domain of sts-2 Phyre2 PDB 2ikq chain A Region: 54 - 188 Aligned: 135 Modelled: 135 Confidence: 99.9% Identity: 27% PDB header:signaling protein, immune system Chain: A: PDB Molecule:suppressor of t-cell receptor signaling 1; PDBTitle: crystal structure of mouse sts-1 pgm domain in complex with phosphate Phyre2 PDB 2rfl chain B Region: 54 - 171 Aligned: 117 Modelled: 115 Confidence: 99.9% Identity: 13% PDB header:hydrolase, isomerase Chain: B: PDB Molecule:putative phosphohistidine phosphatase sixa; PDBTitle: crystal structure of the putative phosphohistidine phosphatase sixa2 from agrobacterium tumefaciens Phyre2 PDB 1yjx chain D Region: 55 - 189 Aligned: 135 Modelled: 135 Confidence: 99.9% Identity: 21% PDB header:isomerase, hydrolase Chain: D: PDB Molecule:phosphoglycerate mutase 1; PDBTitle: crystal structure of human b type phosphoglycerate mutase Phyre2 PDB 1fzt chain A Region: 51 - 200 Aligned: 150 Modelled: 150 Confidence: 99.9% Identity: 19% Fold: Phosphoglycerate mutase-like Superfamily: Phosphoglycerate mutase-like Family: Cofactor-dependent phosphoglycerate mutase Phyre2 PDB 1e58 chain A Region: 55 - 197 Aligned: 143 Modelled: 143 Confidence: 99.9% Identity: 20% Fold: Phosphoglycerate mutase-like Superfamily: Phosphoglycerate mutase-like Family: Cofactor-dependent phosphoglycerate mutase Phyre2 PDB 3f2i chain D Region: 56 - 177 Aligned: 121 Modelled: 122 Confidence: 99.9% Identity: 15% PDB header:structural genomics, unknown function Chain: D: PDB Molecule:alr0221 protein; PDBTitle: crystal structure of the alr0221 protein from nostoc, northeast2 structural genomics consortium target nsr422. Phyre2 PDB 1rii chain A Region: 51 - 189 Aligned: 139 Modelled: 139 Confidence: 99.9% Identity: 21% Fold: Phosphoglycerate mutase-like Superfamily: Phosphoglycerate mutase-like Family: Cofactor-dependent phosphoglycerate mutase Phyre2 PDB 1qhf chain A Region: 54 - 197 Aligned: 144 Modelled: 144 Confidence: 99.9% Identity: 26% Fold: Phosphoglycerate mutase-like Superfamily: Phosphoglycerate mutase-like Family: Cofactor-dependent phosphoglycerate mutase Phyre2 PDB 1xq9 chain A Region: 55 - 197 Aligned: 143 Modelled: 143 Confidence: 99.9% Identity: 22% Fold: Phosphoglycerate mutase-like Superfamily: Phosphoglycerate mutase-like Family: Cofactor-dependent phosphoglycerate mutase Phyre2 PDB 3ezn chain B Region: 55 - 194 Aligned: 140 Modelled: 140 Confidence: 99.9% Identity: 22% PDB header:isomerase Chain: B: PDB Molecule:2,3-bisphosphoglycerate-dependent phosphoglycerate mutase; PDBTitle: crystal structure of phosphoglyceromutase from burkholderia2 pseudomallei 1710b Phyre2 PDB 3pgm chain A Region: 54 - 189 Aligned: 136 Modelled: 136 Confidence: 99.9% Identity: 26% Fold: Phosphoglycerate mutase-like Superfamily: Phosphoglycerate mutase-like Family: Cofactor-dependent phosphoglycerate mutase Phyre2 PDB 3fjy chain B Region: 46 - 186 Aligned: 140 Modelled: 140 Confidence: 99.9% Identity: 14% PDB header:hydrolase Chain: B: PDB Molecule:probable mutt1 protein; PDBTitle: crystal structure of a probable mutt1 protein from bifidobacterium2 adolescentis Phyre2 PDB 1bif chain A domain 2 Region: 55 - 178 Aligned: 120 Modelled: 124 Confidence: 99.8% Identity: 20% Fold: Phosphoglycerate mutase-like Superfamily: Phosphoglycerate mutase-like Family: 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase, phosphatase domain Phyre2 PDB 1k6m chain A domain 2 Region: 55 - 178 Aligned: 120 Modelled: 124 Confidence: 99.8% Identity: 21% Fold: Phosphoglycerate mutase-like Superfamily: Phosphoglycerate mutase-like Family: 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase, phosphatase domain Phyre2 PDB 3mxo chain B Region: 49 - 200 Aligned: 149 Modelled: 152 Confidence: 99.8% Identity: 15% PDB header:hydrolase Chain: B: PDB Molecule:serine/threonine-protein phosphatase pgam5, mitochondrial; PDBTitle: crystal structure oh human phosphoglycerate mutase family member 52 (pgam5) Phyre2 PDB 1h2e chain A Region: 54 - 193 Aligned: 139 Modelled: 140 Confidence: 99.8% Identity: 23% Fold: Phosphoglycerate mutase-like Superfamily: Phosphoglycerate mutase-like Family: Cofactor-dependent phosphoglycerate mutase Phyre2 1 c1ujcA_ 2 c2a6pA_ 3 c3c7tB_ 4 c3d4iD_ 5 c2ikqA_ 6 c2rflB_ 7 c1yjxD_ 8 d1fzta_ 9 d1e58a_ 10 c3f2iD_ 11 d1riia_ 12 d1qhfa_ 13 d1xq9a_ 14 c3eznB_ 15 d3pgma_ 16 c3fjyB_ 17 d1bifa2 18 d1k6ma2 19 c3mxoB_ 20 d1h2ea_ 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76 77 78 79 80 81 82 83 84 85 86 87 88 89 90 91 92 93 94 95 96 97 98 99

Detailed template information

# Template Alignment Coverage 3D Model Confidence % i.d. Template Information

1 c1ujcA_ 99.9 14 PDB header:hydrolase Chain: A: PDB Molecule:phosphohistidine phosphatase sixa; PDBTitle: structure of the protein histidine phosphatase sixa2 complexed with tungstate 2 c2a6pA_ 99.9 17 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:possible phosphoglycerate mutase gpm2; PDBTitle: structure solution to 2.2 angstrom and functional characterisation of2 the open reading frame rv3214 from mycobacterium tuberculosis 3 c3c7tB_ 99.9 21 PDB header:hydrolase Chain: B: PDB Molecule:ecdysteroid-phosphate phosphatase; PDBTitle: crystal structure of the ecdysone phosphate phosphatase, eppase, from2 bombix mori in complex with tungstate 4 c3d4iD_ 99.9 20 PDB header:hydrolase Chain: D: PDB Molecule:sts-2 protein; PDBTitle: crystal structure of the 2h-phosphatase domain of sts-2 5 c2ikqA_ 99.9 27 PDB header:signaling protein, immune system Chain: A: PDB Molecule:suppressor of t-cell receptor signaling 1; PDBTitle: crystal structure of mouse sts-1 pgm domain in complex with phosphate 6 c2rflB_ 99.9 13 PDB header:hydrolase, isomerase Chain: B: PDB Molecule:putative phosphohistidine phosphatase sixa; PDBTitle: crystal structure of the putative phosphohistidine phosphatase sixa2 from agrobacterium tumefaciens 7 c1yjxD_ 99.9 21 PDB header:isomerase, hydrolase Chain: D: PDB Molecule:phosphoglycerate mutase 1; PDBTitle: crystal structure of human b type phosphoglycerate mutase 8 d1fzta_ 99.9 19 Fold:Phosphoglycerate mutase-like Superfamily:Phosphoglycerate mutase-like Family:Cofactor-dependent phosphoglycerate mutase 9 d1e58a_ 99.9 20 Fold:Phosphoglycerate mutase-like Superfamily:Phosphoglycerate mutase-like Family:Cofactor-dependent phosphoglycerate mutase 10 c3f2iD_ 99.9 15 PDB header:structural genomics, unknown function Chain: D: PDB Molecule:alr0221 protein; PDBTitle: crystal structure of the alr0221 protein from nostoc, northeast2 structural genomics consortium target nsr422. 11 d1riia_ 99.9 21 Fold:Phosphoglycerate mutase-like Superfamily:Phosphoglycerate mutase-like Family:Cofactor-dependent phosphoglycerate mutase 12 d1qhfa_ 99.9 26 Fold:Phosphoglycerate mutase-like Superfamily:Phosphoglycerate mutase-like Family:Cofactor-dependent phosphoglycerate mutase 13 d1xq9a_ 99.9 22 Fold:Phosphoglycerate mutase-like Superfamily:Phosphoglycerate mutase-like Family:Cofactor-dependent phosphoglycerate mutase 14 c3eznB_ 99.9 22 PDB header:isomerase Chain: B: PDB Molecule:2,3-bisphosphoglycerate-dependent phosphoglycerate mutase; PDBTitle: crystal structure of phosphoglyceromutase from burkholderia2 pseudomallei 1710b 15 d3pgma_ 99.9 26 Fold:Phosphoglycerate mutase-like Superfamily:Phosphoglycerate mutase-like Family:Cofactor-dependent phosphoglycerate mutase 16 c3fjyB_ 99.9 14 PDB header:hydrolase Chain: B: PDB Molecule:probable mutt1 protein; PDBTitle: crystal structure of a probable mutt1 protein from bifidobacterium2 adolescentis 17 d1bifa2 99.8 20 Fold:Phosphoglycerate mutase-like Superfamily:Phosphoglycerate mutase-like Family:6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase, phosphatase domain 18 d1k6ma2 99.8 21 Fold:Phosphoglycerate mutase-like Superfamily:Phosphoglycerate mutase-like Family:6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase, phosphatase domain 19 c3mxoB_ 99.8 15 PDB header:hydrolase Chain: B: PDB Molecule:serine/threonine-protein phosphatase pgam5, mitochondrial; PDBTitle: crystal structure oh human phosphoglycerate mutase family member 52 (pgam5) 20 d1h2ea_ 99.8 23 Fold:Phosphoglycerate mutase-like Superfamily:Phosphoglycerate mutase-like Family:Cofactor-dependent phosphoglycerate mutase 21 c3d8hB_ not modelled 99.8 16 PDB header:isomerase Chain: B: PDB Molecule:glycolytic phosphoglycerate mutase; PDBTitle: crystal structure of phosphoglycerate mutase from cryptosporidium2 parvum, cgd7_4270 22 c3r7aA_ not modelled 99.8 16 PDB header:transferase Chain: A: PDB Molecule:phosphoglycerate mutase, putative; PDBTitle: crystal structure of phosphoglycerate mutase from bacillus anthracis2 str. sterne 23 c3ll4B_ not modelled 99.8 25 PDB header:hydrolase Chain: B: PDB Molecule:uncharacterized protein ykr043c; PDBTitle: structure of the h13a mutant of ykr043c in complex with fructose-1,6-2 bisphosphate 24 c2i1vB_ not modelled 99.8 20 PDB header:transferase, hydrolase Chain: B: PDB Molecule:6-phosphofructo-2-kinase/fructose-2,6- PDBTitle: crystal structure of pfkfb3 in complex with adp and2 fructose-2,6-bisphosphate 25 c3f3kA_ not modelled 99.8 24 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:uncharacterized protein ykr043c; PDBTitle: the structure of uncharacterized protein ykr043c from saccharomyces2 cerevisiae. 26 d1v37a_ not modelled 99.8 22 Fold:Phosphoglycerate mutase-like Superfamily:Phosphoglycerate mutase-like Family:Cofactor-dependent phosphoglycerate mutase 27 d1tipa_ not modelled 99.8 17 Fold:Phosphoglycerate mutase-like Superfamily:Phosphoglycerate mutase-like Family:6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase, phosphatase domain 28 c1k6mA_ not modelled 99.8 21 PDB header:transferase, hydrolase Chain: A: PDB Molecule:6-phosphofructo-2-kinase/fructose-2,6- PDBTitle: crystal structure of human liver 6-phosphofructo-2-2 kinase/fructose-2,6-bisphosphatase 29 c1bifA_ not modelled 99.8 19 PDB header:bifunctional enzyme Chain: A: PDB Molecule:6-phosphofructo-2-kinase/ fructose-2,6-bisphosphatase; PDBTitle: 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase bifunctional2 enzyme complexed with atp-g-s and phosphate 30 c3dcyA_ not modelled 99.8 18 PDB header:apoptosis regulator Chain: A: PDB Molecule:regulator protein; PDBTitle: crystal structure a tp53-induced glycolysis and apoptosis2 regulator protein from homo sapiens. 31 c2qniA_ not modelled 99.8 17 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:uncharacterized protein atu0299; PDBTitle: crystal structure of uncharacterized protein atu0299 32 c3e9eB_ not modelled 99.8 22 PDB header:hydrolase Chain: B: PDB Molecule:zgc:56074; PDBTitle: structure of full-length h11a mutant form of tigar from danio rerio 33 d2hhja1 not modelled 99.8 22 Fold:Phosphoglycerate mutase-like Superfamily:Phosphoglycerate mutase-like Family:Cofactor-dependent phosphoglycerate mutase 34 c3hjgB_ not modelled 99.8 20 PDB header:hydrolase Chain: B: PDB Molecule:putative alpha-ribazole-5'-phosphate phosphatase PDBTitle: crystal structure of putative alpha-ribazole-5'-phosphate2 phosphatase cobc from vibrio parahaemolyticus 35 c3eozB_ not modelled 99.7 22 PDB header:isomerase Chain: B: PDB Molecule:putative phosphoglycerate mutase; PDBTitle: crystal structure of phosphoglycerate mutase from plasmodium2 falciparum, pfd0660w 36 d1nd6a_ not modelled 98.5 30 Fold:Phosphoglycerate mutase-like Superfamily:Phosphoglycerate mutase-like Family:Histidine acid phosphatase 37 c2glcA_ not modelled 98.4 25 PDB header:hydrolase Chain: A: PDB Molecule:histidine acid phosphatase; PDBTitle: structure of francisella tularensis histidine acid2 phosphatase bound to orthovanadate 38 d1rpaa_ not modelled 98.3 26 Fold:Phosphoglycerate mutase-like Superfamily:Phosphoglycerate mutase-like Family:Histidine acid phosphatase 39 c2wniC_ not modelled 98.3 22 PDB header:hydrolase Chain: C: PDB Molecule:3-phytase; PDBTitle: crystal structure analysis of klebsiella sp asr1 phytase 40 d1dkla_ not modelled 98.3 25 Fold:Phosphoglycerate mutase-like Superfamily:Phosphoglycerate mutase-like Family:Histidine acid phosphatase 41 d1ihpa_ not modelled 98.3 27 Fold:Phosphoglycerate mutase-like Superfamily:Phosphoglycerate mutase-like Family:Histidine acid phosphatase 42 d1nt4a_ not modelled 98.3 21 Fold:Phosphoglycerate mutase-like Superfamily:Phosphoglycerate mutase-like Family:Histidine acid phosphatase 43 d1qfxa_ not modelled 98.0 27 Fold:Phosphoglycerate mutase-like Superfamily:Phosphoglycerate mutase-like Family:Histidine acid phosphatase 44 c2gfiB_ not modelled 97.9 31 PDB header:hydrolase Chain: B: PDB Molecule:phytase; PDBTitle: crystal structure of the phytase from d. castellii at 2.3 a 45 d1qwoa_ not modelled 97.9 27 Fold:Phosphoglycerate mutase-like Superfamily:Phosphoglycerate mutase-like Family:Histidine acid phosphatase 46 c2c4kD_ not modelled 46.2 16 PDB header:regulatory protein Chain: D: PDB Molecule:phosphoribosyl pyrophosphate synthetase- PDBTitle: crystal structure of human phosphoribosylpyrophosphate2 synthetase-associated protein 39 (pap39) 47 d1j5pa4 not modelled 42.7 8 Fold:NAD(P)-binding Rossmann-fold domains Superfamily:NAD(P)-binding Rossmann-fold domains Family:Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain 48 c2yl4A_ not modelled 40.9 13 PDB header:membrane protein Chain: A: PDB Molecule:atp-binding cassette sub-family b member 10, PDBTitle: structure of the human mitochondrial abc transporter, abcb10 49 d1ekja_ not modelled 37.3 20 Fold:Resolvase-like Superfamily:beta-carbonic anhydrase, cab Family:beta-carbonic anhydrase, cab 50 d1tiaa_ not modelled 36.6 20 Fold:alpha/beta-Hydrolases Superfamily:alpha/beta-Hydrolases Family:Fungal lipases 51 c1u9yD_ not modelled 34.3 19 PDB header:transferase Chain: D: PDB Molecule:ribose-phosphate pyrophosphokinase; PDBTitle: crystal structure of phosphoribosyl diphosphate synthase2 from methanocaldococcus jannaschii 52 c1f0cB_ not modelled 33.7 36 PDB header:viral protein Chain: B: PDB Molecule:ice inhibitor; PDBTitle: structure of the viral serpin crma 53 c3b5wE_ not modelled 33.3 16 PDB header:membrane protein Chain: E: PDB Molecule:lipid a export atp-binding/permease protein msba; PDBTitle: crystal structure of eschericia coli msba 54 c3o0dF_ not modelled 32.1 24 PDB header:hydrolase Chain: F: PDB Molecule:triacylglycerol lipase; PDBTitle: crystal structure of lip2 lipase from yarrowia lipolytica at 1.7 a2 resolution 55 d1tiba_ not modelled 30.4 20 Fold:alpha/beta-Hydrolases Superfamily:alpha/beta-Hydrolases Family:Fungal lipases 56 c1dkrB_ not modelled 29.6 19 PDB header:transferase Chain: B: PDB Molecule:phosphoribosyl pyrophosphate synthetase; PDBTitle: crystal structures of bacillus subtilis phosphoribosylpyrophosphate2 synthetase: molecular basis of allosteric inhibition and activation. 57 c3efhB_ not modelled 29.0 15 PDB header:transferase Chain: B: PDB Molecule:ribose-phosphate pyrophosphokinase 1; PDBTitle: crystal structure of human phosphoribosyl pyrophosphate2 synthetase 1 58 c3dahB_ not modelled 27.0 15 PDB header:transferase Chain: B: PDB Molecule:ribose-phosphate pyrophosphokinase; PDBTitle: 2.3 a crystal structure of ribose-phosphate pyrophosphokinase from2 burkholderia pseudomallei 59 d3tgla_ not modelled 24.2 20 Fold:alpha/beta-Hydrolases Superfamily:alpha/beta-Hydrolases Family:Fungal lipases 60 c3ucoB_ not modelled 23.6 16 PDB header:lyase/lyase inhibitor Chain: B: PDB Molecule:carbonic anhydrase; PDBTitle: coccomyxa beta-carbonic anhydrase in complex with iodide 61 d1lgya_ not modelled 22.9 12 Fold:alpha/beta-Hydrolases Superfamily:alpha/beta-Hydrolases Family:Fungal lipases 62 d1g5ca_ not modelled 21.5 18 Fold:Resolvase-like Superfamily:beta-carbonic anhydrase, cab Family:beta-carbonic anhydrase, cab 63 d1t57a_ not modelled 20.9 18 Fold:Pyruvate kinase C-terminal domain-like Superfamily:PK C-terminal domain-like Family:MTH1675-like 64 c1ii8B_ not modelled 20.0 10 PDB header:replication Chain: B: PDB Molecule:rad50 abc-atpase; PDBTitle: crystal structure of the p. furiosus rad50 atpase domain 65 c3ngmB_ not modelled 19.9 16 PDB header:hydrolase Chain: B: PDB Molecule:extracellular lipase; PDBTitle: crystal structure of lipase from gibberella zeae 66 c2w3nA_ not modelled 19.4 8 PDB header:lyase Chain: A: PDB Molecule:carbonic anhydrase 2; PDBTitle: structure and inhibition of the co2-sensing carbonic2 anhydrase can2 from the pathogenic fungus cryptococcus3 neoformans 67 d1l1sa_ not modelled 19.2 12 Fold:DsrEFH-like Superfamily:DsrEFH-like Family:DsrEF-like 68 c3g7nA_ not modelled 18.4 28 PDB header:hydrolase Chain: A: PDB Molecule:lipase; PDBTitle: crystal structure of a triacylglycerol lipase from2 penicillium expansum at 1.3 69 c1xexB_ not modelled 18.2 10 PDB header:cell cycle Chain: B: PDB Molecule:smc protein; PDBTitle: structural biochemistry of atp-driven dimerization and dna2 stimulated activation of smc atpases. 70 d2co5a1 not modelled 18.1 27 Fold:DNA/RNA-binding 3-helical bundle Superfamily:"Winged helix" DNA-binding domain Family:F93-like 71 d1su7a_ not modelled 18.1 30 Fold:Prismane protein-like Superfamily:Prismane protein-like Family:Carbon monoxide dehydrogenase 72 d1oaoa_ not modelled 17.3 26 Fold:Prismane protein-like Superfamily:Prismane protein-like Family:Carbon monoxide dehydrogenase 73 c2hydB_ not modelled 17.0 21 PDB header:transport protein Chain: B: PDB Molecule:abc transporter homolog; PDBTitle: multidrug abc transporter sav1866 74 c1ylkA_ not modelled 16.6 14 PDB header:unknown function Chain: A: PDB Molecule:hypothetical protein rv1284/mt1322; PDBTitle: crystal structure of rv1284 from mycobacterium tuberculosis in complex2 with thiocyanate 75 d1uwca_ not modelled 16.6 24 Fold:alpha/beta-Hydrolases Superfamily:alpha/beta-Hydrolases Family:Fungal lipases 76 d1i6pa_ not modelled 16.5 16 Fold:Resolvase-like Superfamily:beta-carbonic anhydrase, cab Family:beta-carbonic anhydrase, cab 77 c3b5xB_ not modelled 16.4 15 PDB header:membrane protein Chain: B: PDB Molecule:lipid a export atp-binding/permease protein msba; PDBTitle: crystal structure of msba from vibrio cholerae 78 c2pd2A_ not modelled 14.7 18 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:hypothetical protein st0148; PDBTitle: crystal structure of (st0148) conserved hypothetical from sulfolobus2 tokodaii strain7 79 c1jqkE_ not modelled 14.6 35 PDB header:oxidoreductase Chain: E: PDB Molecule:carbon monoxide dehydrogenase; PDBTitle: crystal structure of carbon monoxide dehydrogenase from2 rhodospirillum rubrum 80 d1jqka_ not modelled 14.6 35 Fold:Prismane protein-like Superfamily:Prismane protein-like Family:Carbon monoxide dehydrogenase 81 c2zyiB_ not modelled 14.5 10 PDB header:hydrolase Chain: B: PDB Molecule:lipase, putative; PDBTitle: a. fulgidus lipase with fatty acid fragment and calcium 82 c1f2uD_ not modelled 13.8 12 PDB header:replication Chain: D: PDB Molecule:rad50 abc-atpase; PDBTitle: crystal structure of rad50 abc-atpase 83 c3lp5A_ not modelled 13.7 13 PDB header:hydrolase Chain: A: PDB Molecule:putative cell surface hydrolase; PDBTitle: the crystal structure of the putative cell surface hydrolase from2 lactobacillus plantarum wcfs1 84 c3eyxB_ not modelled 13.6 11 PDB header:lyase Chain: B: PDB Molecule:carbonic anhydrase; PDBTitle: crystal structure of carbonic anhydrase nce103 from2 saccharomyces cerevisiae 85 c2oryA_ not modelled 13.5 11 PDB header:hydrolase Chain: A: PDB Molecule:lipase; PDBTitle: crystal structure of m37 lipase 86 d1dkua2 not modelled 12.7 19 Fold:PRTase-like Superfamily:PRTase-like Family:Phosphoribosylpyrophosphate synthetase-like 87 d1vp8a_ not modelled 12.3 17 Fold:Pyruvate kinase C-terminal domain-like Superfamily:PK C-terminal domain-like Family:MTH1675-like 88 c2pjzA_ not modelled 12.0 14 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:hypothetical protein st1066; PDBTitle: the crystal structure of putative cobalt transport atp-2 binding protein (cbio-2), st1066 89 d3b48a1 not modelled 12.0 22 Fold:PTS system fructose IIA component-like Superfamily:PTS system fructose IIA component-like Family:DhaM-like 90 c3nhaA_ not modelled 11.9 15 PDB header:transport protein Chain: A: PDB Molecule:atp-binding cassette sub-family b member 6, mitochondrial; PDBTitle: nucleotide binding domain of human abcb6 (adp mg bound structure) 91 c2a8cE_ not modelled 11.0 16 PDB header:lyase Chain: E: PDB Molecule:carbonic anhydrase 2; PDBTitle: haemophilus influenzae beta-carbonic anhydrase 92 c3ds8A_ not modelled 10.9 17 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:lin2722 protein; PDBTitle: the crysatl structure of the gene lin2722 products from listeria2 innocua 93 d2c4ka2 not modelled 10.9 16 Fold:PRTase-like Superfamily:PRTase-like Family:Phosphoribosylpyrophosphate synthetase-like 94 c2l9dA_ not modelled 10.6 14 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:uncharacterized protein; PDBTitle: solution structure of the protein yp_546394.1, the first structural2 representative of the pfam family pf12112 95 c2p51A_ not modelled 10.6 13 PDB header:hydrolase, gene regulation Chain: A: PDB Molecule:spcc18.06c protein; PDBTitle: crystal structure of the s. pombe pop2p deadenylation2 subunit 96 c2a5vB_ not modelled 10.4 18 PDB header:lyase Chain: B: PDB Molecule:carbonic anhydrase (carbonate dehydratase) (carbonic PDBTitle: crystal structure of m. tuberculosis beta carbonic anhydrase, rv3588c,2 tetrameric form 97 d1pf4a1 not modelled 10.3 15 Fold:P-loop containing nucleoside triphosphate hydrolases Superfamily:P-loop containing nucleoside triphosphate hydrolases Family:ABC transporter ATPase domain-like 98 c2olkD_ not modelled 10.2 16 PDB header:hydrolase Chain: D: PDB Molecule:amino acid abc transporter; PDBTitle: abc protein artp in complex with adp-beta-s 99 d2h1qa1 not modelled 9.9 12 Fold:PLP-dependent transferase-like Superfamily:Dhaf3308-like Family:Dhaf3308-like

Binding site prediction

Due to computational demand, binding site predictions are not run for batch jobs

If you want to predict binding sites, please manually submit your model of choice to 3DLigandSite

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
If you use the binding site predictions from 3DLigandSite, please also cite:
3DLigandSite: predicting ligand-binding sites using similar structures.
Wass MN, Kelley LA and Sternberg MJ Nucleic Acids Research 38, W469-73 (2010) [PubMed]
© Structural Bioinformatics Group Imperial College London Lawrence Kelley, Benjamin Jefferys Disclaimer Terms and Conditions	Component software Template detection: HHpred 1.51 Secondary structure prediction: Psi-pred 2.5 Disorder prediction: Disopred 2.4 Transmembrane prediction: Memsat_SVM Multi-template modelling and ab initio: Poing 1.0