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  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: c3b5xB_

Fold library idPDB HeaderMoleculeTitle
c3b5xB_PDB header: membrane proteinChain: B: PDB Molecule: lipid a export atp-binding/permease protein msba;PDBTitle: crystal structure of msba from vibrio cholerae


Added to library: Tue Mar 16 13:03:01 2010
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence WQTFKRLWTYIRLYKAGLVVSTIALVINAAADTYMISLLKPLLDEGFGNAESNFLRILPFMILGLMFVRG
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Known secondary structure (DSSP)
TTTSGGGGTTTTTTTTTTTTTSSSTBTTBTTTSTTTT
 .........80.........90.........100.........110.........120.........130.........140
Sequence LSGFASSYCLSWVSGNVVMQMRRRLFNHFMHMPVRFFDQESTGGLLSRITYDSEQVAGATSRALVSIVRE
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Known secondary structure (DSSP) GGGTTTTTTTSSSSSTSTTTTTTTS
TTTTTTTSTT
 .........150.........160.........170.........180.........190.........200.........210
Sequence GASIIGLLTLMFWNSWQLSLVLIVVAPVVAFAISFVSKRFRKISRNMQTAMGHVTSSAEQMLKGHKVVLS
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Known secondary structure (DSSP) SSSTTTTTTTTTTTSTTSSSTTTTTTTTTTTTTTTTTTTTTTTTGGG
 .........220.........230.........240.........250.........260.........270.........280
Sequence YGGQEVERKRFDKVSNSMRQQTMKLVSAQSIADPVIQMIASLALFAVLFLASVDSIRAELTPGTFTVVFS
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Known secondary structure (DSSP)


TTTTTTTTTTTTTTTTTTTT
TTSSSSTTTTTT
 .........290.........300.........310.........320.........330.........340.........350
Sequence AMFGLMRPLKALTSVTSEFQRGMAACQTLFGLMDLETERDNGKYEAERVNGEVDVKDVTFTYQGKEKPAL
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Known secondary structure (DSSP) TTTTTTS

S





SS

S





B

S



SSTTS

SS
 .........360.........370.........380.........390.........400.........410.........420
Sequence SHVSFSIPQGKTVALVGRSGSGKSTIANLFTRFYDVDSGSICLDGHDVRDYKLTNLRRHFALVSQNVHLF
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Known secondary structure (DSSP)
S





SS

TTTTTTS

SS



S
TTSTTS
SSSSSTT

SS



 .........430.........440.........450.........460.........470.........480.........490
Sequence NDTIANNIAYAAEGEYTREQIEQAARQAHAMEFIENMPQGLDTVIGENGTSLSGGQRQRVAIARALLRDA
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Known secondary structure (DSSP) TT
TTSSSS

S
STTTSTTTTTTSSSS
SS



SS
SSS
TTT


 .........500.........510.........520.........530.........540.........550.........560
Sequence PVLILDEATSALDTESERAIQAALDELQKNKTVLVIAHRLSTIEQADEILVVDEGEIIERGRHADLLAQD
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Known secondary structure (DSSP) SS

S
SS

TTTTTTTTS


S
GGGGGT
S

SS


S
SS
 .........570..
Sequence GAYAQLHRIQFG
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Known secondary structure (DSSP)
TTTTTSTTS


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction
Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960
 
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Michael Sternberg  
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