PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.0

Fold library entry viewer: c3lp5A_

Fold library id	PDB Header	Molecule	Title
c3lp5A_	PDB header: hydrolase	Chain: A: PDB Molecule: putative cell surface hydrolase;	PDBTitle: the crystal structure of the putative cell surface hydrolase2 from lactobacillus plantarum wcfs1

Links to external resources
Added to library: Sun Aug 29 05:57:30 2010

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence A T R M A P V I M V P G S S A S Q N R F D S L I T E L G K E T P K K H S V L K L T V Q T D G T I K Y S G S I A A N D N E P F I V I G F A N N

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S
G G G S S S
T T S
T T
S S
S

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence R D G K A N I D K Q A V W L N T A F K A L V K T Y H F N H F Y A L G H S N G G L I W T L F L E R Y L K E S P K V H I D R L M T I A S P Y N M

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S T T S
S T T G G G S T T
S
T T T

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence E S T S T T A K T S M F K E L Y R Y R T G L P E S L T V Y S I A G T E N Y T S D G T V P Y N S V N Y G K Y I F Q D Q V K H F T E I T V T G A

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T
S S
T G G G S
T T
T T T B
T T T T T S S
T T T

. . . . . . . . . 220 . . . . . . . . . 230 . . . . . . . . . 240 . . . . . . . . . 250

Sequence N T A H S D L P Q N K Q I V S L I R Q Y L L A E T M P D K V R Q K N A Q R V Q N

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T B S S
T S
T T B

Download: PDB structure FASTA sequence
Hidden Markov model

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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis

Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	A	T	R	M	A	P	V	I	M	V	P	G	S	S	A	S	Q	N	R	F	D	S	L	I	T	E	L	G	K	E	T	P	K	K	H	S	V	L	K	L	T	V	Q	T	D	G	T	I	K	Y	S	G	S	I	A	A	N	D	N	E	P	F	I	V	I	G	F	A	N	N
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			S											G	G	G															S	S	S											T	T	S										T	T		S	S								S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	R	D	G	K	A	N	I	D	K	Q	A	V	W	L	N	T	A	F	K	A	L	V	K	T	Y	H	F	N	H	F	Y	A	L	G	H	S	N	G	G	L	I	W	T	L	F	L	E	R	Y	L	K	E	S	P	K	V	H	I	D	R	L	M	T	I	A	S	P	Y	N	M
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			S																				T	T	S			S								T													T	G	G	G	S	T	T										S			T	T	T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	E	S	T	S	T	T	A	K	T	S	M	F	K	E	L	Y	R	Y	R	T	G	L	P	E	S	L	T	V	Y	S	I	A	G	T	E	N	Y	T	S	D	G	T	V	P	Y	N	S	V	N	Y	G	K	Y	I	F	Q	D	Q	V	K	H	F	T	E	I	T	V	T	G	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T				S	S												T	G	G	G	S		T	T														T	T	T	B							T	T						T	T	T	S	S								T	T	T
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250
Sequence	N	T	A	H	S	D	L	P	Q	N	K	Q	I	V	S	L	I	R	Q	Y	L	L	A	E	T	M	P	D	K	V	R	Q	K	N	A	Q	R	V	Q	N
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	B	S	S																	T	S														T	T	B