PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c2olkD_

Fold library id	PDB Header	Molecule	Title
c2olkD_	PDB header: hydrolase	Chain: D: PDB Molecule: amino acid abc transporter;	PDBTitle: abc protein artp in complex with adp-beta-s

Links to external resources
Added to library: Tue Mar 16 13:26:12 2010

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence L Q M I D V H Q L K K S F G S L E V L K G I N V H I R E G E V V V V I G P S G S G K S T F L R C L N L L E D F D E G E I I I D G I N L K A K

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S S S
T T
S T T S S T T S S
S T T T T S T

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence D T N L N K V R E E V G M V F Q R F N L F P H M T V L N N I T L A P M K V R K W P R E K A E A K A M E L L D K V G L K D K A H A Y P D S L S

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T
S S
S
T T S
T S
T T
G G G T T S
G G G S

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence G G Q A Q R V A I A R A L A M E P K I M L F D E P T S A L D P E M V G E V L S V M K Q L A N E G M T M V V V T H E M G F A R E V G D R V L F

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T
S S S S T T S
T T
S
S

. . . . . . . . . 220 . . . . . . . . . 230 . . . . . . . . . 240 . .

Sequence M D G G Y I I E E G K P E D L F D R P Q H E R T K A F L S K V F

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T
S
S S

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	L	Q	M	I	D	V	H	Q	L	K	K	S	F	G	S	L	E	V	L	K	G	I	N	V	H	I	R	E	G	E	V	V	V	V	I	G	P	S	G	S	G	K	S	T	F	L	R	C	L	N	L	L	E	D	F	D	E	G	E	I	I	I	D	G	I	N	L	K	A	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			S										S	S	S													T	T								S	T	T	S	S									T	T	S	S			S							T	T			T	T	S	T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	D	T	N	L	N	K	V	R	E	E	V	G	M	V	F	Q	R	F	N	L	F	P	H	M	T	V	L	N	N	I	T	L	A	P	M	K	V	R	K	W	P	R	E	K	A	E	A	K	A	M	E	L	L	D	K	V	G	L	K	D	K	A	H	A	Y	P	D	S	L	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T															S	S			S		T	T	S													T	S																		T	T		G	G	G	T	T	S		G	G	G	S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	G	G	Q	A	Q	R	V	A	I	A	R	A	L	A	M	E	P	K	I	M	L	F	D	E	P	T	S	A	L	D	P	E	M	V	G	E	V	L	S	V	M	K	Q	L	A	N	E	G	M	T	M	V	V	V	T	H	E	M	G	F	A	R	E	V	G	D	R	V	L	F
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)														T	T			S						S	S	S	T	T	S																		T	T								S										S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.
Sequence	M	D	G	G	Y	I	I	E	E	G	K	P	E	D	L	F	D	R	P	Q	H	E	R	T	K	A	F	L	S	K	V	F
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			T	T														S		S	S