Secondary structure and disorder prediction

		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60
Sequence		M	K	E	I	I	D	G	F	L	K	F	Q	R	E	A	F	P	K	R	E	A	L	F	K	Q	L	A	T	Q	Q	S	P	R	T	L	F	I	S	C	S	D	S	R	L	V	P	E	L	V	T	Q	R	E	P	G	D	L	F	V	I
Secondary structure
SS confidence
Disorder		?												?	?	?	?	?	?	?	?						?
Disorder confidence
		.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120
Sequence		R	N	A	G	N	I	V	P	S	Y	G	P	E	P	G	G	V	S	A	S	V	E	Y	A	V	A	A	L	R	V	S	D	I	V	I	C	G	H	S	N	C	G	A	M	T	A	I	A	S	C	Q	C	M	D	H	M	P	A	V	S
Secondary structure
SS confidence
Disorder																																																					?	?	?	?	?	?
Disorder confidence
		.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180
Sequence		H	W	L	R	Y	A	D	S	A	R	V	V	N	E	A	R	P	H	S	D	L	P	S	K	A	A	A	M	V	R	E	N	V	I	A	Q	L	A	N	L	Q	T	H	P	S	V	R	L	A	L	E	E	G	R	I	A	L	H	G	W
Secondary structure
SS confidence
Disorder																?	?	?	?	?	?
Disorder confidence
		.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.
Sequence		V	Y	D	I	E	S	G	S	I	A	A	F	D	G	A	T	R	Q	F	V	P	L	A	A	N	P	R	V	C	A	I	P	L	R	Q	P	T	A	A
Secondary structure
SS confidence
Disorder																	?										?	?	?	?	?	?	?	?	?	?	?	?	?	?
Disorder confidence

Confidence Key
High(9)											Low (0)

?	Disordered
	Alpha helix
	Beta strand

Domain analysis

Hover over an aligned region to see model and summary info

Please note, only up to the top 20 hits are modelled to reduce computer load

Rank Aligned region

PDB 1ddz chain A domain 1 Region: 1 - 210 Aligned: 204 Modelled: 210 Confidence: 100.0% Identity: 25% Fold: Resolvase-like Superfamily: beta-carbonic anhydrase, cab Family: beta-carbonic anhydrase, cab Phyre2 PDB 1ekj chain A Region: 1 - 203 Aligned: 203 Modelled: 203 Confidence: 100.0% Identity: 33% Fold: Resolvase-like Superfamily: beta-carbonic anhydrase, cab Family: beta-carbonic anhydrase, cab Phyre2 PDB 1ddz chain A domain 2 Region: 1 - 203 Aligned: 197 Modelled: 203 Confidence: 100.0% Identity: 24% Fold: Resolvase-like Superfamily: beta-carbonic anhydrase, cab Family: beta-carbonic anhydrase, cab Phyre2 PDB 1i6p chain A Region: 1 - 204 Aligned: 198 Modelled: 204 Confidence: 100.0% Identity: 29% Fold: Resolvase-like Superfamily: beta-carbonic anhydrase, cab Family: beta-carbonic anhydrase, cab Phyre2 PDB 1ddz chain A Region: 1 - 209 Aligned: 203 Modelled: 209 Confidence: 100.0% Identity: 25% PDB header:lyase Chain: A: PDB Molecule:carbonic anhydrase; PDBTitle: x-ray structure of a beta-carbonic anhydrase from the red2 alga, porphyridium purpureum r-1 Phyre2 PDB 3uco chain B Region: 1 - 209 Aligned: 205 Modelled: 209 Confidence: 100.0% Identity: 28% PDB header:lyase/lyase inhibitor Chain: B: PDB Molecule:carbonic anhydrase; PDBTitle: coccomyxa beta-carbonic anhydrase in complex with iodide Phyre2 PDB 2a8c chain E Region: 1 - 203 Aligned: 197 Modelled: 203 Confidence: 100.0% Identity: 31% PDB header:lyase Chain: E: PDB Molecule:carbonic anhydrase 2; PDBTitle: haemophilus influenzae beta-carbonic anhydrase Phyre2 PDB 2w3n chain A Region: 1 - 198 Aligned: 192 Modelled: 198 Confidence: 100.0% Identity: 26% PDB header:lyase Chain: A: PDB Molecule:carbonic anhydrase 2; PDBTitle: structure and inhibition of the co2-sensing carbonic2 anhydrase can2 from the pathogenic fungus cryptococcus3 neoformans Phyre2 PDB 2a5v chain B Region: 1 - 197 Aligned: 187 Modelled: 197 Confidence: 100.0% Identity: 25% PDB header:lyase Chain: B: PDB Molecule:carbonic anhydrase (carbonate dehydratase) (carbonic PDBTitle: crystal structure of m. tuberculosis beta carbonic anhydrase, rv3588c,2 tetrameric form Phyre2 PDB 3eyx chain B Region: 1 - 197 Aligned: 186 Modelled: 197 Confidence: 100.0% Identity: 27% PDB header:lyase Chain: B: PDB Molecule:carbonic anhydrase; PDBTitle: crystal structure of carbonic anhydrase nce103 from2 saccharomyces cerevisiae Phyre2 PDB 3las chain A Region: 1 - 193 Aligned: 161 Modelled: 178 Confidence: 100.0% Identity: 25% PDB header:lyase Chain: A: PDB Molecule:putative carbonic anhydrase; PDBTitle: crystal structure of carbonic anhydrase from streptococcus mutans to2 1.4 angstrom resolution Phyre2 PDB 1ylk chain A Region: 1 - 194 Aligned: 160 Modelled: 188 Confidence: 100.0% Identity: 22% PDB header:unknown function Chain: A: PDB Molecule:hypothetical protein rv1284/mt1322; PDBTitle: crystal structure of rv1284 from mycobacterium tuberculosis in complex2 with thiocyanate Phyre2 PDB 1g5c chain A Region: 1 - 196 Aligned: 166 Modelled: 196 Confidence: 100.0% Identity: 33% Fold: Resolvase-like Superfamily: beta-carbonic anhydrase, cab Family: beta-carbonic anhydrase, cab Phyre2 PDB 2hwk chain A Region: 154 - 219 Aligned: 59 Modelled: 66 Confidence: 61.5% Identity: 20% PDB header:hydrolase Chain: A: PDB Molecule:helicase nsp2; PDBTitle: crystal structure of venezuelan equine encephalitis2 alphavirus nsp2 protease domain Phyre2 PDB 1hlg chain A Region: 75 - 108 Aligned: 33 Modelled: 34 Confidence: 40.0% Identity: 18% Fold: alpha/beta-Hydrolases Superfamily: alpha/beta-Hydrolases Family: Gastric lipase Phyre2 PDB 1zo0 chain A domain 1 Region: 75 - 96 Aligned: 22 Modelled: 22 Confidence: 40.0% Identity: 32% Fold: Acyl-CoA N-acyltransferases (Nat) Superfamily: Acyl-CoA N-acyltransferases (Nat) Family: Ornithine decarboxylase antizyme-like Phyre2 PDB 1k8q chain A Region: 75 - 108 Aligned: 33 Modelled: 34 Confidence: 39.9% Identity: 15% Fold: alpha/beta-Hydrolases Superfamily: alpha/beta-Hydrolases Family: Gastric lipase Phyre2 PDB 3d89 chain A Region: 178 - 189 Aligned: 12 Modelled: 12 Confidence: 37.2% Identity: 17% PDB header:electron transport Chain: A: PDB Molecule:rieske domain-containing protein; PDBTitle: crystal structure of a soluble rieske ferredoxin from mus musculus Phyre2 PDB 1fqt chain A Region: 178 - 190 Aligned: 13 Modelled: 13 Confidence: 34.0% Identity: 15% Fold: ISP domain Superfamily: ISP domain Family: Rieske iron-sulfur protein (ISP) Phyre2 PDB 2de7 chain E Region: 178 - 190 Aligned: 13 Modelled: 13 Confidence: 33.2% Identity: 31% PDB header:oxidoreductase Chain: E: PDB Molecule:ferredoxin component of carbazole; PDBTitle: the substrate-bound complex between oxygenase and2 ferredoxin in carbazole 1,9a-dioxygenase Phyre2 1 d1ddza1 2 d1ekja_ 3 d1ddza2 4 d1i6pa_ 5 c1ddzA_ 6 c3ucoB_ 7 c2a8cE_ 8 c2w3nA_ 9 c2a5vB_ 10 c3eyxB_ 11 c3lasA_ 12 c1ylkA_ 13 d1g5ca_ 14 c2hwkA_ 15 d1hlga_ 16 d1zo0a1 17 d1k8qa_ 18 c3d89A_ 19 d1fqta_ 20 c2de7E_ 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76 77 78 79 80 81 82 83 84 85 86 87 88 89 90 91 92 93 94 95 96 97 98 99

Detailed template information

# Template Alignment Coverage 3D Model Confidence % i.d. Template Information

1 d1ddza1 100.0 25 Fold:Resolvase-like Superfamily:beta-carbonic anhydrase, cab Family:beta-carbonic anhydrase, cab 2 d1ekja_ 100.0 33 Fold:Resolvase-like Superfamily:beta-carbonic anhydrase, cab Family:beta-carbonic anhydrase, cab 3 d1ddza2 100.0 24 Fold:Resolvase-like Superfamily:beta-carbonic anhydrase, cab Family:beta-carbonic anhydrase, cab 4 d1i6pa_ 100.0 29 Fold:Resolvase-like Superfamily:beta-carbonic anhydrase, cab Family:beta-carbonic anhydrase, cab 5 c1ddzA_ 100.0 25 PDB header:lyase Chain: A: PDB Molecule:carbonic anhydrase; PDBTitle: x-ray structure of a beta-carbonic anhydrase from the red2 alga, porphyridium purpureum r-1 6 c3ucoB_ 100.0 28 PDB header:lyase/lyase inhibitor Chain: B: PDB Molecule:carbonic anhydrase; PDBTitle: coccomyxa beta-carbonic anhydrase in complex with iodide 7 c2a8cE_ 100.0 31 PDB header:lyase Chain: E: PDB Molecule:carbonic anhydrase 2; PDBTitle: haemophilus influenzae beta-carbonic anhydrase 8 c2w3nA_ 100.0 26 PDB header:lyase Chain: A: PDB Molecule:carbonic anhydrase 2; PDBTitle: structure and inhibition of the co2-sensing carbonic2 anhydrase can2 from the pathogenic fungus cryptococcus3 neoformans 9 c2a5vB_ 100.0 25 PDB header:lyase Chain: B: PDB Molecule:carbonic anhydrase (carbonate dehydratase) (carbonic PDBTitle: crystal structure of m. tuberculosis beta carbonic anhydrase, rv3588c,2 tetrameric form 10 c3eyxB_ 100.0 27 PDB header:lyase Chain: B: PDB Molecule:carbonic anhydrase; PDBTitle: crystal structure of carbonic anhydrase nce103 from2 saccharomyces cerevisiae 11 c3lasA_ 100.0 25 PDB header:lyase Chain: A: PDB Molecule:putative carbonic anhydrase; PDBTitle: crystal structure of carbonic anhydrase from streptococcus mutans to2 1.4 angstrom resolution 12 c1ylkA_ 100.0 22 PDB header:unknown function Chain: A: PDB Molecule:hypothetical protein rv1284/mt1322; PDBTitle: crystal structure of rv1284 from mycobacterium tuberculosis in complex2 with thiocyanate 13 d1g5ca_ 100.0 33 Fold:Resolvase-like Superfamily:beta-carbonic anhydrase, cab Family:beta-carbonic anhydrase, cab 14 c2hwkA_ 61.5 20 PDB header:hydrolase Chain: A: PDB Molecule:helicase nsp2; PDBTitle: crystal structure of venezuelan equine encephalitis2 alphavirus nsp2 protease domain 15 d1hlga_ 40.0 18 Fold:alpha/beta-Hydrolases Superfamily:alpha/beta-Hydrolases Family:Gastric lipase 16 d1zo0a1 40.0 32 Fold:Acyl-CoA N-acyltransferases (Nat) Superfamily:Acyl-CoA N-acyltransferases (Nat) Family:Ornithine decarboxylase antizyme-like 17 d1k8qa_ 39.9 15 Fold:alpha/beta-Hydrolases Superfamily:alpha/beta-Hydrolases Family:Gastric lipase 18 c3d89A_ 37.2 17 PDB header:electron transport Chain: A: PDB Molecule:rieske domain-containing protein; PDBTitle: crystal structure of a soluble rieske ferredoxin from mus musculus 19 d1fqta_ 34.0 15 Fold:ISP domain Superfamily:ISP domain Family:Rieske iron-sulfur protein (ISP) 20 c2de7E_ 33.2 31 PDB header:oxidoreductase Chain: E: PDB Molecule:ferredoxin component of carbazole; PDBTitle: the substrate-bound complex between oxygenase and2 ferredoxin in carbazole 1,9a-dioxygenase 21 d2jo6a1 not modelled 32.4 8 Fold:ISP domain Superfamily:ISP domain Family:NirD-like 22 d1z01a1 not modelled 32.1 38 Fold:ISP domain Superfamily:ISP domain Family:Ring hydroxylating alpha subunit ISP domain 23 d2de6a1 not modelled 32.1 38 Fold:ISP domain Superfamily:ISP domain Family:Ring hydroxylating alpha subunit ISP domain 24 c3gceA_ not modelled 30.4 25 PDB header:oxidoreductase Chain: A: PDB Molecule:ferredoxin component of carbazole 1,9a- PDBTitle: ferredoxin of carbazole 1,9a-dioxygenase from nocardioides2 aromaticivorans ic177 25 c3i8sC_ not modelled 29.4 36 PDB header:transport protein Chain: C: PDB Molecule:ferrous iron transport protein b; PDBTitle: structure of the cytosolic domain of e. coli feob, nucleotide-free2 form 26 c3ibyA_ not modelled 27.9 33 PDB header:transport protein Chain: A: PDB Molecule:ferrous iron transport protein b; PDBTitle: structure of cytosolic domain of l. pneumophila feob 27 d1nrjb_ not modelled 27.8 42 Fold:P-loop containing nucleoside triphosphate hydrolases Superfamily:P-loop containing nucleoside triphosphate hydrolases Family:G proteins 28 c3degC_ not modelled 27.4 21 PDB header:ribosome Chain: C: PDB Molecule:gtp-binding protein lepa; PDBTitle: complex of elongating escherichia coli 70s ribosome and ef4(lepa)-2 gmppnp 29 d1rkba_ not modelled 26.9 20 Fold:P-loop containing nucleoside triphosphate hydrolases Superfamily:P-loop containing nucleoside triphosphate hydrolases Family:Nucleotide and nucleoside kinases 30 c2h5eB_ not modelled 26.7 21 PDB header:translation Chain: B: PDB Molecule:peptide chain release factor rf-3; PDBTitle: crystal structure of e.coli polypeptide release factor rf3 31 d1w2ia_ not modelled 26.4 26 Fold:Ferredoxin-like Superfamily:Acylphosphatase/BLUF domain-like Family:Acylphosphatase-like 32 c1d2eA_ not modelled 26.0 27 PDB header:rna binding protein Chain: A: PDB Molecule:elongation factor tu (ef-tu); PDBTitle: crystal structure of mitochondrial ef-tu in complex with gdp 33 c3melC_ not modelled 25.6 9 PDB header:structural genomics, unknown function Chain: C: PDB Molecule:thiamin pyrophosphokinase family protein; PDBTitle: crystal structure of thiamin pyrophosphokinase family protein from2 enterococcus faecalis, northeast structural genomics consortium3 target efr150 34 d2fh5b1 not modelled 25.6 17 Fold:P-loop containing nucleoside triphosphate hydrolases Superfamily:P-loop containing nucleoside triphosphate hydrolases Family:G proteins 35 c3ihkC_ not modelled 25.2 6 PDB header:transferase Chain: C: PDB Molecule:thiamin pyrophosphokinase; PDBTitle: crystal structure of thiamin pyrophosphokinase from2 s.mutans, northeast structural genomics consortium target3 smr83 36 d1j2ra_ not modelled 24.8 21 Fold:Isochorismatase-like hydrolases Superfamily:Isochorismatase-like hydrolases Family:Isochorismatase-like hydrolases 37 d1apsa_ not modelled 24.7 26 Fold:Ferredoxin-like Superfamily:Acylphosphatase/BLUF domain-like Family:Acylphosphatase-like 38 c2qpzA_ not modelled 24.7 23 PDB header:metal binding protein Chain: A: PDB Molecule:naphthalene 1,2-dioxygenase system ferredoxin PDBTitle: naphthalene 1,2-dioxygenase rieske ferredoxin 39 c2i7fB_ not modelled 24.7 42 PDB header:oxidoreductase Chain: B: PDB Molecule:ferredoxin component of dioxygenase; PDBTitle: sphingomonas yanoikuyae b1 ferredoxin 40 c2rauA_ not modelled 24.5 15 PDB header:hydrolase Chain: A: PDB Molecule:putative esterase; PDBTitle: crystal structure of a putative lipase (np_343859.1) from sulfolobus2 solfataricus at 1.85 a resolution 41 d1s0ua3 not modelled 24.3 36 Fold:P-loop containing nucleoside triphosphate hydrolases Superfamily:P-loop containing nucleoside triphosphate hydrolases Family:G proteins 42 d2jzaa1 not modelled 23.7 8 Fold:ISP domain Superfamily:ISP domain Family:NirD-like 43 c1z01D_ not modelled 23.6 36 PDB header:oxidoreductase Chain: D: PDB Molecule:2-oxo-1,2-dihydroquinoline 8-monooxygenase, PDBTitle: 2-oxoquinoline 8-monooxygenase component: active site2 modulation by rieske-[2fe-2s] center oxidation/reduction 44 d2acya_ not modelled 23.5 26 Fold:Ferredoxin-like Superfamily:Acylphosphatase/BLUF domain-like Family:Acylphosphatase-like 45 c1mj1A_ not modelled 23.3 27 PDB header:ribosome Chain: A: PDB Molecule:elongation factor tu; PDBTitle: fitting the ternary complex of ef-tu/trna/gtp and ribosomal proteins2 into a 13 a cryo-em map of the coli 70s ribosome 46 d1vm9a_ not modelled 23.2 25 Fold:ISP domain Superfamily:ISP domain Family:Rieske iron-sulfur protein (ISP) 47 d1n0ua2 not modelled 23.0 23 Fold:P-loop containing nucleoside triphosphate hydrolases Superfamily:P-loop containing nucleoside triphosphate hydrolases Family:G proteins 48 c2qagC_ not modelled 22.8 27 PDB header:cell cycle, structural protein Chain: C: PDB Molecule:septin-7; PDBTitle: crystal structure of human septin trimer 2/6/7 49 c2ywfA_ not modelled 22.6 29 PDB header:translation Chain: A: PDB Molecule:gtp-binding protein lepa; PDBTitle: crystal structure of gmppnp-bound lepa from aquifex aeolicus 50 c2qu8A_ not modelled 22.5 29 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:putative nucleolar gtp-binding protein 1; PDBTitle: crystal structure of putative nucleolar gtp-binding protein 1 pff0625w2 from plasmodium falciparum 51 d1e8ca1 not modelled 22.5 57 Fold:MurF and HprK N-domain-like Superfamily:MurE/MurF N-terminal domain Family:MurE/MurF N-terminal domain 52 d3c0da1 not modelled 22.4 18 Fold:ISP domain Superfamily:ISP domain Family:NirD-like 53 c1zunB_ not modelled 22.4 27 PDB header:transferase Chain: B: PDB Molecule:sulfate adenylate transferase, subunit PDBTitle: crystal structure of a gtp-regulated atp sulfurylase2 heterodimer from pseudomonas syringae 54 c2zxrA_ not modelled 22.3 18 PDB header:hydrolase Chain: A: PDB Molecule:single-stranded dna specific exonuclease recj; PDBTitle: crystal structure of recj in complex with mg2+ from thermus2 thermophilus hb8 55 d1ex9a_ not modelled 22.0 28 Fold:alpha/beta-Hydrolases Superfamily:alpha/beta-Hydrolases Family:Bacterial lipase 56 d1efca3 not modelled 21.4 27 Fold:P-loop containing nucleoside triphosphate hydrolases Superfamily:P-loop containing nucleoside triphosphate hydrolases Family:G proteins 57 c2bvnB_ not modelled 21.3 27 PDB header:elongation factor Chain: B: PDB Molecule:elongation factor tu; PDBTitle: e. coli ef-tu:gdpnp in complex with the antibiotic2 enacyloxin iia 58 c3izyP_ not modelled 20.7 36 PDB header:rna, ribosomal protein Chain: P: PDB Molecule:translation initiation factor if-2, mitochondrial; PDBTitle: mammalian mitochondrial translation initiation factor 2 59 c2dy1A_ not modelled 20.6 21 PDB header:signaling protein, translation Chain: A: PDB Molecule:elongation factor g; PDBTitle: crystal structure of ef-g-2 from thermus thermophilus 60 c3hynA_ not modelled 20.4 27 PDB header:signaling protein Chain: A: PDB Molecule:putative signal transduction protein; PDBTitle: crystal structure of a putative signal transduction protein2 (eubrec_0645) from eubacterium rectale atcc 33656 at 1.20 a3 resolution 61 c3tr5C_ not modelled 20.3 21 PDB header:translation Chain: C: PDB Molecule:peptide chain release factor 3; PDBTitle: structure of a peptide chain release factor 3 (prfc) from coxiella2 burnetii 62 c3gkqB_ not modelled 20.2 42 PDB header:oxidoreductase Chain: B: PDB Molecule:terminal oxygenase component of carbazole 1,9a- PDBTitle: terminal oxygenase of carbazole 1,9a-dioxygenase from2 novosphingobium sp. ka1 63 c3br8A_ not modelled 20.1 23 PDB header:hydrolase Chain: A: PDB Molecule:probable acylphosphatase; PDBTitle: crystal structure of acylphosphatase from bacillus subtilis 64 c3cq9C_ not modelled 20.0 6 PDB header:transferase Chain: C: PDB Molecule:uncharacterized protein lp_1622; PDBTitle: crystal structure of the lp_1622 protein from lactobacillus2 plantarum. northeast structural genomics consortium target3 lpr114 65 c3t5dC_ not modelled 19.7 27 PDB header:signaling protein Chain: C: PDB Molecule:septin-7; PDBTitle: crystal structure of septin 7 in complex with gdp 66 c3k53B_ not modelled 19.7 23 PDB header:metal transport Chain: B: PDB Molecule:ferrous iron transport protein b; PDBTitle: crystal structure of nfeob from p. furiosus 67 d1r5ba3 not modelled 19.3 45 Fold:P-loop containing nucleoside triphosphate hydrolases Superfamily:P-loop containing nucleoside triphosphate hydrolases Family:G proteins 68 d1ulra_ not modelled 19.3 10 Fold:Ferredoxin-like Superfamily:Acylphosphatase/BLUF domain-like Family:Acylphosphatase-like 69 d1egaa1 not modelled 18.7 50 Fold:P-loop containing nucleoside triphosphate hydrolases Superfamily:P-loop containing nucleoside triphosphate hydrolases Family:G proteins 70 c2zyiB_ not modelled 18.2 21 PDB header:hydrolase Chain: B: PDB Molecule:lipase, putative; PDBTitle: a. fulgidus lipase with fatty acid fragment and calcium 71 c2wjjB_ not modelled 18.2 40 PDB header:metal transport Chain: B: PDB Molecule:ferrous iron transport protein b homolog; PDBTitle: structure and function of the feob g-domain from2 methanococcus jannaschii 72 c2bjeA_ not modelled 18.1 21 PDB header:hydrolase Chain: A: PDB Molecule:acylphosphatase; PDBTitle: acylphosphatase from sulfolobus solfataricus. monclinic p212 space group 73 c1r5nA_ not modelled 17.6 45 PDB header:translation Chain: A: PDB Molecule:eukaryotic peptide chain release factor gtp- PDBTitle: crystal structure analysis of sup35 complexed with gdp 74 c2de7B_ not modelled 17.4 42 PDB header:oxidoreductase Chain: B: PDB Molecule:terminal oxygenase component of carbazole; PDBTitle: the substrate-bound complex between oxygenase and2 ferredoxin in carbazole 1,9a-dioxygenase 75 d1g7sa4 not modelled 17.3 27 Fold:P-loop containing nucleoside triphosphate hydrolases Superfamily:P-loop containing nucleoside triphosphate hydrolases Family:G proteins 76 c1qgeD_ not modelled 17.3 24 PDB header:hydrolase Chain: D: PDB Molecule:protein (triacylglycerol hydrolase); PDBTitle: new crystal form of pseudomonas glumae (formerly chromobacterium2 viscosum atcc 6918) lipase 77 d1svia_ not modelled 16.9 36 Fold:P-loop containing nucleoside triphosphate hydrolases Superfamily:P-loop containing nucleoside triphosphate hydrolases Family:G proteins 78 d1udxa2 not modelled 16.9 31 Fold:P-loop containing nucleoside triphosphate hydrolases Superfamily:P-loop containing nucleoside triphosphate hydrolases Family:G proteins 79 d1riea_ not modelled 16.9 58 Fold:ISP domain Superfamily:ISP domain Family:Rieske iron-sulfur protein (ISP) 80 d1gg4a3 not modelled 16.7 50 Fold:MurF and HprK N-domain-like Superfamily:MurE/MurF N-terminal domain Family:MurE/MurF N-terminal domain 81 d2ih2a2 not modelled 16.5 12 Fold:DNA methylase specificity domain Superfamily:DNA methylase specificity domain Family:TaqI C-terminal domain-like 82 c1s0uA_ not modelled 16.5 36 PDB header:translation Chain: A: PDB Molecule:translation initiation factor 2 gamma subunit; PDBTitle: eif2gamma apo 83 c3hb7G_ not modelled 16.3 8 PDB header:hydrolase Chain: G: PDB Molecule:isochorismatase hydrolase; PDBTitle: the crystal structure of an isochorismatase-like hydrolase from2 alkaliphilus metalliredigens to 2.3a 84 c2xexA_ not modelled 16.3 29 PDB header:translation Chain: A: PDB Molecule:elongation factor g; PDBTitle: crystal structure of staphylococcus aureus elongation factor2 g 85 c3pqcA_ not modelled 16.2 29 PDB header:hydrolase Chain: A: PDB Molecule:probable gtp-binding protein engb; PDBTitle: crystal structure of thermotoga maritima ribosome biogenesis gtp-2 binding protein engb (ysxc/yiha) in complex with gdp 86 c1wb1C_ not modelled 15.8 36 PDB header:protein synthesis Chain: C: PDB Molecule:translation elongation factor selb; PDBTitle: crystal structure of translation elongation factor selb2 from methanococcus maripaludis in complex with gdp 87 d2bv3a2 not modelled 15.7 36 Fold:P-loop containing nucleoside triphosphate hydrolases Superfamily:P-loop containing nucleoside triphosphate hydrolases Family:G proteins 88 c3p27A_ not modelled 15.5 29 PDB header:signaling protein Chain: A: PDB Molecule:elongation factor 1 alpha-like protein; PDBTitle: crystal structure of a translational gtpase (gdp form) 89 d2bmoa1 not modelled 15.5 42 Fold:ISP domain Superfamily:ISP domain Family:Ring hydroxylating alpha subunit ISP domain 90 c2r8bA_ not modelled 15.2 13 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:uncharacterized protein atu2452; PDBTitle: the crystal structure of the protein atu2452 of unknown function from2 agrobacterium tumefaciens str. c58 91 c3a1vB_ not modelled 15.1 27 PDB header:transport protein Chain: B: PDB Molecule:iron(ii) transport protein b; PDBTitle: crystal structue of the cytosolic domain of t. maritima feob2 iron iransporter in apo form 92 c1zo1I_ not modelled 15.1 36 PDB header:translation/rna Chain: I: PDB Molecule:translation initiation factor 2; PDBTitle: if2, if1, and trna fitted to cryo-em data of e. coli 70s2 initiation complex 93 d2gmha2 not modelled 14.4 27 Fold:FAD-linked reductases, C-terminal domain Superfamily:FAD-linked reductases, C-terminal domain Family:Electron transfer flavoprotein-ubiquinone oxidoreductase-like 94 d1urra_ not modelled 14.3 15 Fold:Ferredoxin-like Superfamily:Acylphosphatase/BLUF domain-like Family:Acylphosphatase-like 95 c2d2rA_ not modelled 14.3 30 PDB header:transferase Chain: A: PDB Molecule:undecaprenyl pyrophosphate synthase; PDBTitle: crystal structure of helicobacter pylori undecaprenyl pyrophosphate2 synthase 96 c3bwdD_ not modelled 14.3 30 PDB header:plant protein Chain: D: PDB Molecule:rac-like gtp-binding protein arac6; PDBTitle: crystal structure of the plant rho protein rop5 97 c1g7cA_ not modelled 14.3 36 PDB header:translation Chain: A: PDB Molecule:elongation factor 1-alpha; PDBTitle: yeast eef1a:eef1ba in complex with gdpnp 98 d2r8ba1 not modelled 14.2 13 Fold:alpha/beta-Hydrolases Superfamily:alpha/beta-Hydrolases Family:Carboxylesterase/thioesterase 1 99 c2plfA_ not modelled 14.1 36 PDB header:translation Chain: A: PDB Molecule:translation initiation factor 2 gamma subunit; PDBTitle: the structure of aif2gamma subunit from the archaeon2 sulfolobus solfataricus in the nucleotide-free form.

Binding site prediction

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
If you use the binding site predictions from 3DLigandSite, please also cite:
3DLigandSite: predicting ligand-binding sites using similar structures.
Wass MN, Kelley LA and Sternberg MJ Nucleic Acids Research 38, W469-73 (2010) [PubMed]
© Structural Bioinformatics Group Imperial College London Lawrence Kelley, Benjamin Jefferys Disclaimer Terms and Conditions	Component software Template detection: HHpred 1.51 Secondary structure prediction: Psi-pred 2.5 Disorder prediction: Disopred 2.4 Transmembrane prediction: Memsat_SVM Multi-template modelling and ab initio: Poing 1.0