PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c3melC_

Fold library id	PDB Header	Molecule	Title
c3melC_	PDB header: structural genomics, unknown function	Chain: C: PDB Molecule: thiamin pyrophosphokinase family protein;	PDBTitle: crystal structure of thiamin pyrophosphokinase family protein from2 enterococcus faecalis, northeast structural genomics consortium3 target efr150

Links to external resources
Added to library: Sun Aug 29 00:52:19 2010

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence X S R V L L V A G G N P S D W P T I E P A T Y D Y F V G I D R G C L H L L E A D L P L Q L A V G D F D S L S R E E Y H F V Q E T T E T L I Q

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S
G G G
G G G
S T T T
T T S
S

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence A P A E K D D T D T Q L A L Q E A L Q R F P Q A E X T I I G A T G G R I D H L L A N L W L P F E P R F Q G V L R Q I R L C D R Q N S I Q Y Y

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S
S S
T T
S
S S S
T G G G S T T T T T T T

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence A P G S Y I V P K E P D K E Y L A Y C C L T P V E N L T L R R S K Y L L T N Q D V P Y P T S Y A S N E F I E E A A A F S F D A G X I A V I Q

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S
T T
S S
S B S S
S
B S S S S B S

. . . .

Sequence S K D K

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	X	S	R	V	L	L	V	A	G	G	N	P	S	D	W	P	T	I	E	P	A	T	Y	D	Y	F	V	G	I	D	R	G	C	L	H	L	L	E	A	D	L	P	L	Q	L	A	V	G	D	F	D	S	L	S	R	E	E	Y	H	F	V	Q	E	T	T	E	T	L	I	Q
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)									S	S		G	G	G						G	G	G		S						T									T	T											T	T	S													S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	A	P	A	E	K	D	D	T	D	T	Q	L	A	L	Q	E	A	L	Q	R	F	P	Q	A	E	X	T	I	I	G	A	T	G	G	R	I	D	H	L	L	A	N	L	W	L	P	F	E	P	R	F	Q	G	V	L	R	Q	I	R	L	C	D	R	Q	N	S	I	Q	Y	Y
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			S	S		S	S															T	T							S		S	S	S										T	G	G	G	S					T	T	T	T	T						T	T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	A	P	G	S	Y	I	V	P	K	E	P	D	K	E	Y	L	A	Y	C	C	L	T	P	V	E	N	L	T	L	R	R	S	K	Y	L	L	T	N	Q	D	V	P	Y	P	T	S	Y	A	S	N	E	F	I	E	E	A	A	A	F	S	F	D	A	G	X	I	A	V	I	Q
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		S									T	T									S	S									S	B	S	S									S									B	S	S	S							S	B	S
	.	.	.	.
Sequence	S	K	D	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)