Email l.a.kelley@imperial.ac.uk Description P0AGG8 Date Thu Jan 5 11:29:05 GMT 2012 Unique Job ID 5989de5b2aa84641

Detailed template information

# Template Alignment Coverage 3D Model Confidence % i.d. Template Information

1 c3qtdC_ 100.0 21 PDB header:gene regulation Chain: C: PDB Molecule:pmba protein; PDBTitle: crystal structure of putative modulator of gyrase (pmba) from2 pseudomonas aeruginosa pao1 2 d1vpba_ 100.0 21 Fold:Putative modulator of DNA gyrase, PmbA/TldD Superfamily:Putative modulator of DNA gyrase, PmbA/TldD Family:Putative modulator of DNA gyrase, PmbA/TldD 3 d1vl4a_ 100.0 20 Fold:Putative modulator of DNA gyrase, PmbA/TldD Superfamily:Putative modulator of DNA gyrase, PmbA/TldD Family:Putative modulator of DNA gyrase, PmbA/TldD 4 c1bknA_ 35.7 6 PDB header:dna repair Chain: A: PDB Molecule:mutl; PDBTitle: crystal structure of an n-terminal 40kd fragment of e. coli2 dna mismatch repair protein mutl 5 c3kwsB_ 32.4 13 PDB header:isomerase Chain: B: PDB Molecule:putative sugar isomerase; PDBTitle: crystal structure of putative sugar isomerase (yp_001305149.1) from2 parabacteroides distasonis atcc 8503 at 1.68 a resolution 6 d1o12a1 30.3 43 Fold:Composite domain of metallo-dependent hydrolases Superfamily:Composite domain of metallo-dependent hydrolases Family:N-acetylglucosamine-6-phosphate deacetylase, NagA 7 c3onrI_ 30.3 0 PDB header:metal binding protein Chain: I: PDB Molecule:protein transport protein sece2; PDBTitle: crystal structure of the calcium chelating immunodominant antigen,2 calcium dodecin (rv0379),from mycobacterium tuberculosis with a novel3 calcium-binding site 8 d1vlva1 28.3 23 Fold:ATC-like Superfamily:Aspartate/ornithine carbamoyltransferase Family:Aspartate/ornithine carbamoyltransferase 9 c1w7vD_ 24.0 16 PDB header:hydrolase Chain: D: PDB Molecule:xaa-pro aminopeptidase; PDBTitle: znmg substituted aminopeptidase p from e. coli 10 d2q02a1 18.7 7 Fold:TIM beta/alpha-barrel Superfamily:Xylose isomerase-like Family:IolI-like 11 c3ff0A_ 15.9 12 PDB header:biosynthetic protein Chain: A: PDB Molecule:phenazine biosynthesis protein phzb 2; PDBTitle: crystal structure of a phenazine biosynthesis-related protein (phzb2)2 from pseudomonas aeruginosa at 1.90 a resolution 12 c3oqtP_ 14.9 16 PDB header:flavoprotein Chain: P: PDB Molecule:rv1498a protein; PDBTitle: crystal structure of rv1498a protein from mycobacterium tuberculosis 13 d1m1ha1 14.5 28 Fold:N-utilization substance G protein NusG, insert domain Superfamily:N-utilization substance G protein NusG, insert domain Family:N-utilization substance G protein NusG, insert domain 14 d1bkna2 14.4 6 Fold:ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase Superfamily:ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase Family:DNA gyrase/MutL, N-terminal domain 15 c2iv0A_ 13.7 16 PDB header:oxidoreductase Chain: A: PDB Molecule:isocitrate dehydrogenase; PDBTitle: thermal stability of isocitrate dehydrogenase from2 archaeoglobus fulgidus studied by crystal structure3 analysis and engineering of chimers 16 c2bp1C_ 13.6 14 PDB header:oxidoreductase Chain: C: PDB Molecule:aflatoxin b1 aldehyde reductase member 2; PDBTitle: structure of the aflatoxin aldehyde reductase in complex2 with nadph 17 c1ea6A_ 13.3 9 PDB header:dna repair Chain: A: PDB Molecule:pms1 protein homolog 2; PDBTitle: n-terminal 40kda fragment of nhpms2 complexed with adp 18 d1ydua1 13.0 18 Fold:At5g01610-like Superfamily:At5g01610-like Family:At5g01610-like 19 c2qw5B_ 12.4 12 PDB header:isomerase Chain: B: PDB Molecule:xylose isomerase-like tim barrel; PDBTitle: crystal structure of a putative sugar phosphate isomerase/epimerase2 (ava4194) from anabaena variabilis atcc 29413 at 1.78 a resolution 20 d1tuha_ 12.1 8 Fold:Cystatin-like Superfamily:NTF2-like Family:Hypothetical protein egc068 from a soil-derived mobile gene cassette 21 c1tuhA_ not modelled 12.1 8 PDB header:unknown function Chain: A: PDB Molecule:hypothetical protein egc068; PDBTitle: structure of bal32a from a soil-derived mobile gene cassette 22 c1vlvA_ not modelled 11.3 23 PDB header:transferase Chain: A: PDB Molecule:ornithine carbamoyltransferase; PDBTitle: crystal structure of ornithine carbamoyltransferase (tm1097) from2 thermotoga maritima at 2.25 a resolution 23 d1c75a_ not modelled 10.8 23 Fold:Cytochrome c Superfamily:Cytochrome c Family:monodomain cytochrome c 24 d351ca_ not modelled 10.2 5 Fold:Cytochrome c Superfamily:Cytochrome c Family:monodomain cytochrome c 25 d1fi3a_ not modelled 10.2 5 Fold:Cytochrome c Superfamily:Cytochrome c Family:monodomain cytochrome c 26 d1dvva_ not modelled 9.8 5 Fold:Cytochrome c Superfamily:Cytochrome c Family:monodomain cytochrome c 27 c3gknA_ not modelled 9.7 12 PDB header:oxidoreductase Chain: A: PDB Molecule:bacterioferritin comigratory protein; PDBTitle: insights into the alkyl peroxide reduction activity of xanthomonas2 campestris bacterioferritin comigratory protein from the trapped3 intermediate/ligand complex structures 28 c3ezjA_ not modelled 8.9 12 PDB header:protein transport Chain: A: PDB Molecule:general secretion pathway protein gspd; PDBTitle: crystal structure of the n-terminal domain of the secretin gspd from2 etec determined with the assistance of a nanobody 29 d1cora_ not modelled 8.8 5 Fold:Cytochrome c Superfamily:Cytochrome c Family:monodomain cytochrome c 30 c3tr9A_ not modelled 8.5 10 PDB header:transferase Chain: A: PDB Molecule:dihydropteroate synthase; PDBTitle: structure of a dihydropteroate synthase (folp) in complex with pteroic2 acid from coxiella burnetii 31 c3updA_ not modelled 8.4 17 PDB header:transferase Chain: A: PDB Molecule:ornithine carbamoyltransferase; PDBTitle: 2.9 angstrom crystal structure of ornithine carbamoyltransferase2 (argf) from vibrio vulnificus 32 d7odca2 not modelled 8.3 10 Fold:TIM beta/alpha-barrel Superfamily:PLP-binding barrel Family:Alanine racemase-like, N-terminal domain 33 c2on3A_ not modelled 8.2 13 PDB header:lyase Chain: A: PDB Molecule:ornithine decarboxylase; PDBTitle: a structural insight into the inhibition of human and2 leishmania donovani ornithine decarboxylases by 3-aminooxy-3 1-aminopropane 34 d1ynra1 not modelled 8.2 0 Fold:Cytochrome c Superfamily:Cytochrome c Family:monodomain cytochrome c 35 c3l23A_ not modelled 8.1 19 PDB header:isomerase Chain: A: PDB Molecule:sugar phosphate isomerase/epimerase; PDBTitle: crystal structure of sugar phosphate isomerase/epimerase2 (yp_001303399.1) from parabacteroides distasonis atcc 8503 at 1.70 a3 resolution 36 c2xrfA_ not modelled 8.1 13 PDB header:transferase Chain: A: PDB Molecule:uridine phosphorylase 2; PDBTitle: crystal structure of human uridine phosphorylase 2 37 d1otha1 not modelled 8.0 18 Fold:ATC-like Superfamily:Aspartate/ornithine carbamoyltransferase Family:Aspartate/ornithine carbamoyltransferase 38 c3f7xA_ not modelled 8.0 19 PDB header:unknown function Chain: A: PDB Molecule:putative polyketide cyclase; PDBTitle: crystal structure of a putative polyketide cyclase (pp0894) from2 pseudomonas putida kt2440 at 1.24 a resolution 39 d1h7sa2 not modelled 8.0 9 Fold:ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase Superfamily:ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase Family:DNA gyrase/MutL, N-terminal domain 40 d1b63a2 not modelled 7.9 6 Fold:ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase Superfamily:ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase Family:DNA gyrase/MutL, N-terminal domain 41 d1ix2a_ not modelled 7.8 21 Fold:Immunoglobulin-like beta-sandwich Superfamily:E set domains Family:Copper resistance protein C (CopC, PcoC) 42 d2pjua1 not modelled 7.8 21 Fold:Chelatase-like Superfamily:PrpR receptor domain-like Family:PrpR receptor domain-like 43 d2ds5a1 not modelled 7.8 20 Fold:Glucocorticoid receptor-like (DNA-binding domain) Superfamily:Glucocorticoid receptor-like (DNA-binding domain) Family:ClpX chaperone zinc binding domain 44 c1ovxB_ not modelled 7.7 20 PDB header:metal binding protein Chain: B: PDB Molecule:atp-dependent clp protease atp-binding subunit clpx; PDBTitle: nmr structure of the e. coli clpx chaperone zinc binding domain dimer 45 c3cjlA_ not modelled 7.7 31 PDB header:unknown function Chain: A: PDB Molecule:domain of unknown function; PDBTitle: crystal structure of a protein of unknown function (eca1910) from2 pectobacterium atrosepticum scri1043 at 2.20 a resolution 46 c3ixrA_ not modelled 7.6 12 PDB header:oxidoreductase Chain: A: PDB Molecule:bacterioferritin comigratory protein; PDBTitle: crystal structure of xylella fastidiosa prxq c47s mutant 47 c3h4lB_ not modelled 7.2 12 PDB header:dna binding protein, protein binding Chain: B: PDB Molecule:dna mismatch repair protein pms1; PDBTitle: crystal structure of n terminal domain of a dna repair protein 48 d1dxha1 not modelled 7.2 17 Fold:ATC-like Superfamily:Aspartate/ornithine carbamoyltransferase Family:Aspartate/ornithine carbamoyltransferase 49 d1w0da_ not modelled 7.0 14 Fold:Isocitrate/Isopropylmalate dehydrogenase-like Superfamily:Isocitrate/Isopropylmalate dehydrogenase-like Family:Dimeric isocitrate & isopropylmalate dehydrogenases 50 d2a5yb1 not modelled 7.0 13 Fold:DNA/RNA-binding 3-helical bundle Superfamily:"Winged helix" DNA-binding domain Family:CED-4 C-terminal domain-like 51 d2k54a1 not modelled 6.7 21 Fold:Cystatin-like Superfamily:NTF2-like Family:Atu0742-like 52 d1d7ka2 not modelled 6.7 10 Fold:TIM beta/alpha-barrel Superfamily:PLP-binding barrel Family:Alanine racemase-like, N-terminal domain 53 d1pvva1 not modelled 6.7 18 Fold:ATC-like Superfamily:Aspartate/ornithine carbamoyltransferase Family:Aspartate/ornithine carbamoyltransferase 54 c3na3A_ not modelled 6.6 3 PDB header:protein binding Chain: A: PDB Molecule:dna mismatch repair protein mlh1; PDBTitle: mutl protein homolog 1 isoform 1 from homo sapiens 55 c2kk4A_ not modelled 6.6 24 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:uncharacterized protein af_2094; PDBTitle: solution nmr structure of protein af2094 from archaeoglobus2 fulgidus. northeast structural genomics consotium (nesg)3 target gt2 56 c1htrP_ not modelled 6.5 19 PDB header:aspartyl protease Chain: P: PDB Molecule:progastricsin (pro segment); PDBTitle: crystal and molecular structures of human progastricsin at 1.622 angstroms resolution 57 d1s5aa_ not modelled 6.5 13 Fold:Cystatin-like Superfamily:NTF2-like Family:PhzA/PhzB-like 58 d1kfia4 not modelled 6.5 16 Fold:TBP-like Superfamily:Phosphoglucomutase, C-terminal domain Family:Phosphoglucomutase, C-terminal domain 59 c3fuyC_ not modelled 6.4 19 PDB header:structural genomics, unknown function Chain: C: PDB Molecule:putative integron gene cassette protein; PDBTitle: structure from the mobile metagenome of cole harbour salt2 marsh: integron cassette protein hfx_cass1 60 c3e8vA_ not modelled 6.4 25 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:possible transglutaminase-family protein; PDBTitle: crystal structure of a possible transglutaminase-family2 protein proteolytic fragment from bacteroides fragilis 61 d1ajza_ not modelled 6.3 12 Fold:TIM beta/alpha-barrel Superfamily:Dihydropteroate synthetase-like Family:Dihydropteroate synthetase 62 c3k30B_ not modelled 6.3 21 PDB header:oxidoreductase Chain: B: PDB Molecule:histamine dehydrogenase; PDBTitle: histamine dehydrogenase from nocardiodes simplex 63 c2ds8A_ not modelled 6.3 20 PDB header:metal binding protein, protein binding Chain: A: PDB Molecule:atp-dependent clp protease atp-binding subunit PDBTitle: structure of the zbd-xb complex 64 d2c9qa1 not modelled 6.2 18 Fold:Immunoglobulin-like beta-sandwich Superfamily:E set domains Family:Copper resistance protein C (CopC, PcoC) 65 d1ud9a1 not modelled 6.2 16 Fold:DNA clamp Superfamily:DNA clamp Family:DNA polymerase processivity factor 66 c3o6cA_ not modelled 6.2 4 PDB header:transferase Chain: A: PDB Molecule:pyridoxine 5'-phosphate synthase; PDBTitle: pyridoxal phosphate biosynthetic protein pdxj from campylobacter2 jejuni 67 c2l4dA_ not modelled 6.2 20 PDB header:electron transport Chain: A: PDB Molecule:sco1/senc family protein/cytochrome c; PDBTitle: cytochrome c domain of pp3183 protein from pseudomonas putida 68 d1dl6a_ not modelled 6.1 17 Fold:Rubredoxin-like Superfamily:Zinc beta-ribbon Family:Transcriptional factor domain 69 c2ideE_ not modelled 6.0 11 PDB header:biosynthetic protein Chain: E: PDB Molecule:molybdenum cofactor biosynthesis protein c; PDBTitle: crystal structure of the molybdenum cofactor biosynthesis protein c2 (ttha1789) from thermus theromophilus hb8 70 d1m5wa_ not modelled 6.0 17 Fold:TIM beta/alpha-barrel Superfamily:Pyridoxine 5'-phosphate synthase Family:Pyridoxine 5'-phosphate synthase 71 c3r8wC_ not modelled 5.9 9 PDB header:oxidoreductase Chain: C: PDB Molecule:3-isopropylmalate dehydrogenase 2, chloroplastic; PDBTitle: structure of 3-isopropylmalate dehydrogenase isoform 2 from2 arabidopsis thaliana at 2.2 angstrom resolution 72 d1pb1a_ not modelled 5.9 13 Fold:Isocitrate/Isopropylmalate dehydrogenase-like Superfamily:Isocitrate/Isopropylmalate dehydrogenase-like Family:Dimeric isocitrate & isopropylmalate dehydrogenases 73 d1hqsa_ not modelled 5.9 17 Fold:Isocitrate/Isopropylmalate dehydrogenase-like Superfamily:Isocitrate/Isopropylmalate dehydrogenase-like Family:Dimeric isocitrate & isopropylmalate dehydrogenases 74 d1ekxa1 not modelled 5.8 27 Fold:ATC-like Superfamily:Aspartate/ornithine carbamoyltransferase Family:Aspartate/ornithine carbamoyltransferase 75 c2h90A_ not modelled 5.8 10 PDB header:oxidoreductase Chain: A: PDB Molecule:xenobiotic reductase a; PDBTitle: xenobiotic reductase a in complex with coumarin 76 c3jvvA_ not modelled 5.8 10 PDB header:atp binding protein Chain: A: PDB Molecule:twitching mobility protein; PDBTitle: crystal structure of p. aeruginosa pilt with bound amp-pcp 77 d1ad1a_ not modelled 5.7 12 Fold:TIM beta/alpha-barrel Superfamily:Dihydropteroate synthetase-like Family:Dihydropteroate synthetase 78 c3blxM_ not modelled 5.7 14 PDB header:oxidoreductase Chain: M: PDB Molecule:isocitrate dehydrogenase [nad] subunit 1; PDBTitle: yeast isocitrate dehydrogenase (apo form) 79 c3mhsE_ not modelled 5.7 8 PDB header:hydrolase/transcription regulator/protei Chain: E: PDB Molecule:saga-associated factor 73; PDBTitle: structure of the saga ubp8/sgf11/sus1/sgf73 dub module bound to2 ubiquitin aldehyde 80 d1cm7a_ not modelled 5.7 17 Fold:Isocitrate/Isopropylmalate dehydrogenase-like Superfamily:Isocitrate/Isopropylmalate dehydrogenase-like Family:Dimeric isocitrate & isopropylmalate dehydrogenases 81 c3g0kA_ not modelled 5.6 15 PDB header:ca-binding protein Chain: A: PDB Molecule:putative membrane protein; PDBTitle: crystal structure of a protein of unknown function with a cystatin-2 like fold (saro_2880) from novosphingobium aromaticivorans dsm at3 1.30 a resolution 82 d1xaca_ not modelled 5.6 16 Fold:Isocitrate/Isopropylmalate dehydrogenase-like Superfamily:Isocitrate/Isopropylmalate dehydrogenase-like Family:Dimeric isocitrate & isopropylmalate dehydrogenases 83 d1sjwa_ not modelled 5.6 17 Fold:Cystatin-like Superfamily:NTF2-like Family:SnoaL-like polyketide cyclase 84 d1a05a_ not modelled 5.5 18 Fold:Isocitrate/Isopropylmalate dehydrogenase-like Superfamily:Isocitrate/Isopropylmalate dehydrogenase-like Family:Dimeric isocitrate & isopropylmalate dehydrogenases 85 d1e42a2 not modelled 5.5 24 Fold:Subdomain of clathrin and coatomer appendage domain Superfamily:Subdomain of clathrin and coatomer appendage domain Family:Clathrin adaptor appendage, alpha and beta chain-specific domain 86 c3gk0H_ not modelled 5.4 17 PDB header:transferase Chain: H: PDB Molecule:pyridoxine 5'-phosphate synthase; PDBTitle: crystal structure of pyridoxal phosphate biosynthetic2 protein from burkholderia pseudomallei 87 d1hyua4 not modelled 5.3 19 Fold:Thioredoxin fold Superfamily:Thioredoxin-like Family:PDI-like 88 c1yj7A_ not modelled 5.3 10 PDB header:protein transport Chain: A: PDB Molecule:escj; PDBTitle: crystal structure of enteropathogenic e.coli (epec) type iii secretion2 system protein escj 89 c3hz4A_ not modelled 5.3 9 PDB header:oxidoreductase Chain: A: PDB Molecule:thioredoxin; PDBTitle: crystal structure of thioredoxin from methanosarcina mazei 90 d1luza_ not modelled 5.3 18 Fold:OB-fold Superfamily:Nucleic acid-binding proteins Family:Cold shock DNA-binding domain-like 91 d1cnza_ not modelled 5.3 17 Fold:Isocitrate/Isopropylmalate dehydrogenase-like Superfamily:Isocitrate/Isopropylmalate dehydrogenase-like Family:Dimeric isocitrate & isopropylmalate dehydrogenases 92 d1unld_ not modelled 5.2 12 Fold:Cyclin-like Superfamily:Cyclin-like Family:Cyclin 93 c1unhD_ not modelled 5.2 12 PDB header:cell cycle Chain: D: PDB Molecule:cyclin-dependent kinase 5 activator 1; PDBTitle: structural mechanism for the inhibition of cdk5-p25 by2 roscovitine, aloisine and indirubin. 94 d1ddwa_ not modelled 5.2 13 Fold:PH domain-like barrel Superfamily:PH domain-like Family:Enabled/VASP homology 1 domain (EVH1 domain) 95 d1iz5a1 not modelled 5.2 14 Fold:DNA clamp Superfamily:DNA clamp Family:DNA polymerase processivity factor 96 c3b4oB_ not modelled 5.2 13 PDB header:biosynthetic protein Chain: B: PDB Molecule:phenazine biosynthesis protein a/b; PDBTitle: crystal structure of phenazine biosynthesis protein phza/b2 from burkholderia cepacia r18194, apo form 97 d1wgka_ not modelled 5.1 11 Fold:beta-Grasp (ubiquitin-like) Superfamily:MoaD/ThiS Family:C9orf74 homolog 98 d1g2ua_ not modelled 5.1 15 Fold:Isocitrate/Isopropylmalate dehydrogenase-like Superfamily:Isocitrate/Isopropylmalate dehydrogenase-like Family:Dimeric isocitrate & isopropylmalate dehydrogenases 99 d1yhta1 not modelled 5.1 16 Fold:TIM beta/alpha-barrel Superfamily:(Trans)glycosidases Family:beta-N-acetylhexosaminidase catalytic domain