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  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: c3ezjA_

Fold library idPDB HeaderMoleculeTitle
c3ezjA_PDB header: protein transportChain: A: PDB Molecule: general secretion pathway protein gspd;PDBTitle: crystal structure of the n-terminal domain of the secretin2 gspd from etec determined with the assistance of a nanobody


Added to library: Tue Mar 16 11:55:47 2010
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence ATFTANFKDTDLKSFIETVGANLNKTIIMVQGAVSIRTMTPLNERQYYQLFLNLLEAQGYAVVPMENDVL
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Known secondary structure (DSSP)

B

T




SS
B
TTTTT
 .........80.........90.........100.........110.........120.........130.........140
Sequence KVVKSGDEMVTKVVPVRNVSVRELAPILRQMIDSAGSGNVVNYDPSNVIMLTGRASVVERLTEVIQRVDH
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Known secondary structure (DSSP)





SS
GGGT
SS
TTT
 .........150.........160.........170.........180.........190........
Sequence AGNRTEEVIPLDNASASEIARVLESLTQIVADERTNSVIVSGDPATRDKMRRLIRRLD
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Known secondary structure (DSSP) TT

SSS
TT

TTTT
T


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction
Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960
 
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