Secondary structure and disorder prediction

		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60
Sequence		M	R	M	N	V	F	E	M	E	G	F	L	R	G	K	C	V	P	R	D	L	K	V	N	E	T	N	A	E	Y	L	V	R	K	F	D	A	L	E	A	K	C	A	A	L	E	N	K	I	I	P	V	S	A	E	L	P	P	A	N
Secondary structure
SS confidence
Disorder		?	?	?				?	?																																			?	?	?	?	?		?	?	?	?	?		?	?	?	?	?	?
Disorder confidence
		.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120
Sequence		E	S	V	L	L	F	D	A	N	G	E	G	W	L	I	G	W	R	S	L	W	Y	T	W	G	Q	K	E	T	G	E	W	Q	W	T	F	Q	V	G	D	L	E	N	V	N	I	T	H	W	A	V	M	P	K	A	P	E	A	G	A
Secondary structure
SS confidence
Disorder																											?		?	?	?	?																							?	?	?	?	?	?	?
Disorder confidence
Sequence
Secondary structure
SS confidence
Disorder
Disorder confidence

Confidence Key
High(9)											Low (0)

?	Disordered
	Alpha helix
	Beta strand

Domain analysis

Hover over an aligned region to see model and summary info

Please note, only up to the top 20 hits are modelled to reduce computer load

Rank Aligned region

PDB 3gw6 chain F Region: 27 - 46 Aligned: 20 Modelled: 20 Confidence: 32.3% Identity: 45% PDB header:chaperone Chain: F: PDB Molecule:endo-n-acetylneuraminidase; PDBTitle: intramolecular chaperone Phyre2 PDB 3g79 chain A Region: 14 - 52 Aligned: 39 Modelled: 39 Confidence: 29.9% Identity: 31% PDB header:oxidoreductase Chain: A: PDB Molecule:ndp-n-acetyl-d-galactosaminuronic acid dehydrogenase; PDBTitle: crystal structure of ndp-n-acetyl-d-galactosaminuronic acid2 dehydrogenase from methanosarcina mazei go1 Phyre2 PDB 1zy7 chain A Region: 15 - 34 Aligned: 20 Modelled: 20 Confidence: 25.2% Identity: 35% PDB header:hydrolase Chain: A: PDB Molecule:rna-specific adenosine deaminase b1, isoform PDBTitle: crystal structure of the catalytic domain of an adenosine2 deaminase that acts on rna (hadar2) bound to inositol3 hexakisphosphate (ihp) Phyre2 PDB 2plg chain A domain 1 Region: 85 - 119 Aligned: 35 Modelled: 35 Confidence: 24.2% Identity: 31% Fold: Secretion chaperone-like Superfamily: Type III secretory system chaperone-like Family: Tll0839-like Phyre2 PDB 3pln chain A Region: 10 - 67 Aligned: 58 Modelled: 58 Confidence: 23.2% Identity: 19% PDB header:oxidoreductase Chain: A: PDB Molecule:udp-glucose 6-dehydrogenase; PDBTitle: crystal structure of klebsiella pneumoniae udp-glucose 6-dehydrogenase2 complexed with udp-glucose Phyre2 PDB 1mv8 chain A Region: 10 - 67 Aligned: 58 Modelled: 58 Confidence: 20.9% Identity: 28% PDB header:oxidoreductase Chain: A: PDB Molecule:gdp-mannose 6-dehydrogenase; PDBTitle: 1.55 a crystal structure of a ternary complex of gdp-mannose2 dehydrogenase from psuedomonas aeruginosa Phyre2 PDB 3er7 chain A domain 1 Region: 78 - 111 Aligned: 22 Modelled: 34 Confidence: 20.1% Identity: 41% Fold: Cystatin-like Superfamily: NTF2-like Family: Exig0174-like Phyre2 PDB 1dli chain A Region: 14 - 67 Aligned: 54 Modelled: 54 Confidence: 19.1% Identity: 19% PDB header:oxidoreductase Chain: A: PDB Molecule:udp-glucose dehydrogenase; PDBTitle: the first structure of udp-glucose dehydrogenase (udpgdh) reveals the2 catalytic residues necessary for the two-fold oxidation Phyre2 PDB 3prj chain B Region: 14 - 67 Aligned: 54 Modelled: 54 Confidence: 17.8% Identity: 22% PDB header:oxidoreductase Chain: B: PDB Molecule:udp-glucose 6-dehydrogenase; PDBTitle: role of packing defects in the evolution of allostery and induced fit2 in human udp-glucose dehydrogenase. Phyre2 PDB 3ci9 chain B Region: 30 - 43 Aligned: 14 Modelled: 14 Confidence: 15.2% Identity: 29% PDB header:transcription Chain: B: PDB Molecule:heat shock factor-binding protein 1; PDBTitle: crystal structure of the human hsbp1 Phyre2 PDB 3ojl chain A Region: 10 - 52 Aligned: 40 Modelled: 43 Confidence: 15.1% Identity: 28% PDB header:oxidoreductase Chain: A: PDB Molecule:cap5o; PDBTitle: native structure of the udp-n-acetyl-mannosamine dehydrogenase cap5o2 from staphylococcus aureus Phyre2 PDB 2y0d chain B Region: 14 - 67 Aligned: 54 Modelled: 54 Confidence: 15.0% Identity: 33% PDB header:oxidoreductase Chain: B: PDB Molecule:udp-glucose dehydrogenase; PDBTitle: bcec mutation y10k Phyre2 PDB 3m06 chain F Region: 31 - 52 Aligned: 21 Modelled: 22 Confidence: 14.0% Identity: 43% PDB header:protein binding Chain: F: PDB Molecule:tnf receptor-associated factor 2; PDBTitle: crystal structure of traf2 Phyre2 PDB 1tta chain A Region: 45 - 100 Aligned: 56 Modelled: 56 Confidence: 13.0% Identity: 18% Fold: Prealbumin-like Superfamily: Transthyretin (synonym: prealbumin) Family: Transthyretin (synonym: prealbumin) Phyre2 PDB 2keq chain A Region: 14 - 89 Aligned: 52 Modelled: 53 Confidence: 13.0% Identity: 23% PDB header:splicing Chain: A: PDB Molecule:dna polymerase iii alpha subunit, nucleic acid PDBTitle: solution structure of dnae intein from nostoc punctiforme Phyre2 PDB 1aq5 chain C Region: 29 - 50 Aligned: 22 Modelled: 22 Confidence: 12.5% Identity: 45% PDB header:coiled-coil Chain: C: PDB Molecule:cartilage matrix protein; PDBTitle: high-resolution solution nmr structure of the trimeric coiled-coil2 domain of chicken cartilage matrix protein, 20 structures Phyre2 PDB 2lka chain A Region: 12 - 19 Aligned: 8 Modelled: 8 Confidence: 11.8% Identity: 63% PDB header:toxin Chain: A: PDB Molecule:toxin ts16; PDBTitle: new tricks of an old fold: structural versatility of scorpion toxins2 with common cysteine spacing Phyre2 PDB 2oqq chain B Region: 24 - 47 Aligned: 24 Modelled: 24 Confidence: 10.8% Identity: 29% PDB header:transcription Chain: B: PDB Molecule:transcription factor hy5; PDBTitle: crystal structure of hy5 leucine zipper homodimer from2 arabidopsis thaliana Phyre2 PDB 1rwh chain A domain 1 Region: 77 - 99 Aligned: 22 Modelled: 23 Confidence: 10.4% Identity: 32% Fold: alpha/alpha toroid Superfamily: Chondroitin AC/alginate lyase Family: Hyaluronate lyase-like catalytic, N-terminal domain Phyre2 PDB 3ryl chain B Region: 31 - 46 Aligned: 16 Modelled: 16 Confidence: 10.2% Identity: 44% PDB header:protein binding Chain: B: PDB Molecule:protein vpa1370; PDBTitle: dimerization domain of vibrio parahemolyticus vopl Phyre2 1 c3gw6F_ 2 c3g79A_ 3 c1zy7A_ 4 d2plga1 5 c3plnA_ 6 c1mv8A_ 7 d3er7a1 8 c1dliA_ 9 c3prjB_ 10 c3ci9B_ 11 c3ojlA_ 12 c2y0dB_ 13 c3m06F_ 14 d1ttaa_ 15 c2keqA_ 16 c1aq5C_ 17 c2lkaA_ 18 c2oqqB_ 19 d1rwha1 20 c3rylB_ 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73

Detailed template information

# Template Alignment Coverage 3D Model Confidence % i.d. Template Information

1 c3gw6F_ 32.3 45 PDB header:chaperone Chain: F: PDB Molecule:endo-n-acetylneuraminidase; PDBTitle: intramolecular chaperone 2 c3g79A_ 29.9 31 PDB header:oxidoreductase Chain: A: PDB Molecule:ndp-n-acetyl-d-galactosaminuronic acid dehydrogenase; PDBTitle: crystal structure of ndp-n-acetyl-d-galactosaminuronic acid2 dehydrogenase from methanosarcina mazei go1 3 c1zy7A_ 25.2 35 PDB header:hydrolase Chain: A: PDB Molecule:rna-specific adenosine deaminase b1, isoform PDBTitle: crystal structure of the catalytic domain of an adenosine2 deaminase that acts on rna (hadar2) bound to inositol3 hexakisphosphate (ihp) 4 d2plga1 24.2 31 Fold:Secretion chaperone-like Superfamily:Type III secretory system chaperone-like Family:Tll0839-like 5 c3plnA_ 23.2 19 PDB header:oxidoreductase Chain: A: PDB Molecule:udp-glucose 6-dehydrogenase; PDBTitle: crystal structure of klebsiella pneumoniae udp-glucose 6-dehydrogenase2 complexed with udp-glucose 6 c1mv8A_ 20.9 28 PDB header:oxidoreductase Chain: A: PDB Molecule:gdp-mannose 6-dehydrogenase; PDBTitle: 1.55 a crystal structure of a ternary complex of gdp-mannose2 dehydrogenase from psuedomonas aeruginosa 7 d3er7a1 20.1 41 Fold:Cystatin-like Superfamily:NTF2-like Family:Exig0174-like 8 c1dliA_ 19.1 19 PDB header:oxidoreductase Chain: A: PDB Molecule:udp-glucose dehydrogenase; PDBTitle: the first structure of udp-glucose dehydrogenase (udpgdh) reveals the2 catalytic residues necessary for the two-fold oxidation 9 c3prjB_ 17.8 22 PDB header:oxidoreductase Chain: B: PDB Molecule:udp-glucose 6-dehydrogenase; PDBTitle: role of packing defects in the evolution of allostery and induced fit2 in human udp-glucose dehydrogenase. 10 c3ci9B_ 15.2 29 PDB header:transcription Chain: B: PDB Molecule:heat shock factor-binding protein 1; PDBTitle: crystal structure of the human hsbp1 11 c3ojlA_ 15.1 28 PDB header:oxidoreductase Chain: A: PDB Molecule:cap5o; PDBTitle: native structure of the udp-n-acetyl-mannosamine dehydrogenase cap5o2 from staphylococcus aureus 12 c2y0dB_ 15.0 33 PDB header:oxidoreductase Chain: B: PDB Molecule:udp-glucose dehydrogenase; PDBTitle: bcec mutation y10k 13 c3m06F_ 14.0 43 PDB header:protein binding Chain: F: PDB Molecule:tnf receptor-associated factor 2; PDBTitle: crystal structure of traf2 14 d1ttaa_ 13.0 18 Fold:Prealbumin-like Superfamily:Transthyretin (synonym: prealbumin) Family:Transthyretin (synonym: prealbumin) 15 c2keqA_ 13.0 23 PDB header:splicing Chain: A: PDB Molecule:dna polymerase iii alpha subunit, nucleic acid PDBTitle: solution structure of dnae intein from nostoc punctiforme 16 c1aq5C_ 12.5 45 PDB header:coiled-coil Chain: C: PDB Molecule:cartilage matrix protein; PDBTitle: high-resolution solution nmr structure of the trimeric coiled-coil2 domain of chicken cartilage matrix protein, 20 structures 17 c2lkaA_ 11.8 63 PDB header:toxin Chain: A: PDB Molecule:toxin ts16; PDBTitle: new tricks of an old fold: structural versatility of scorpion toxins2 with common cysteine spacing 18 c2oqqB_ 10.8 29 PDB header:transcription Chain: B: PDB Molecule:transcription factor hy5; PDBTitle: crystal structure of hy5 leucine zipper homodimer from2 arabidopsis thaliana 19 d1rwha1 10.4 32 Fold:alpha/alpha toroid Superfamily:Chondroitin AC/alginate lyase Family:Hyaluronate lyase-like catalytic, N-terminal domain 20 c3rylB_ 10.2 44 PDB header:protein binding Chain: B: PDB Molecule:protein vpa1370; PDBTitle: dimerization domain of vibrio parahemolyticus vopl 21 d1f53a_ not modelled 10.1 29 Fold:gamma-Crystallin-like Superfamily:gamma-Crystallin-like Family:Killer toxin-like protein SKLP 22 c3c8xA_ not modelled 10.1 17 PDB header:transferase Chain: A: PDB Molecule:ephrin type-a receptor 2; PDBTitle: crystal structure of the ligand binding domain of human ephrin a22 (epha2) receptor protein kinase 23 c1cosA_ not modelled 10.0 50 PDB header:alpha-helical bundle Chain: A: PDB Molecule:coiled serine; PDBTitle: crystal structure of a synthetic triple-stranded alpha-2 helical bundle 24 c1cosC_ not modelled 10.0 50 PDB header:alpha-helical bundle Chain: C: PDB Molecule:coiled serine; PDBTitle: crystal structure of a synthetic triple-stranded alpha-2 helical bundle 25 c1cosB_ not modelled 10.0 50 PDB header:alpha-helical bundle Chain: B: PDB Molecule:coiled serine; PDBTitle: crystal structure of a synthetic triple-stranded alpha-2 helical bundle 26 c3gg2B_ not modelled 9.9 45 PDB header:oxidoreductase Chain: B: PDB Molecule:sugar dehydrogenase, udp-glucose/gdp-mannose PDBTitle: crystal structure of udp-glucose 6-dehydrogenase from2 porphyromonas gingivalis bound to product udp-glucuronate 27 c3f59A_ not modelled 9.7 45 PDB header:structural protein Chain: A: PDB Molecule:ankyrin-1; PDBTitle: crystal structure of zu5-ank, the spectrin binding region of human2 erythroid ankyrin 28 c2h1xB_ not modelled 9.6 23 PDB header:hydrolase Chain: B: PDB Molecule:5-hydroxyisourate hydrolase (formerly known as PDBTitle: crystal structure of 5-hydroxyisourate hydrolase (formerly2 known as trp, transthyretin related protein) 29 d2it9a1 not modelled 9.2 42 Fold:ssDNA-binding transcriptional regulator domain Superfamily:ssDNA-binding transcriptional regulator domain Family:PMN2A0962/syc2379c-like 30 d2bvca1 not modelled 8.9 11 Fold:beta-Grasp (ubiquitin-like) Superfamily:Glutamine synthetase, N-terminal domain Family:Glutamine synthetase, N-terminal domain 31 c1coiA_ not modelled 8.8 50 PDB header:alpha-helical bundle Chain: A: PDB Molecule:coil-vald; PDBTitle: designed trimeric coiled coil-vald 32 d1mv8a1 not modelled 8.6 55 Fold:6-phosphogluconate dehydrogenase C-terminal domain-like Superfamily:6-phosphogluconate dehydrogenase C-terminal domain-like Family:UDP-glucose/GDP-mannose dehydrogenase dimerisation domain 33 d1f52a1 not modelled 8.3 11 Fold:beta-Grasp (ubiquitin-like) Superfamily:Glutamine synthetase, N-terminal domain Family:Glutamine synthetase, N-terminal domain 34 d1dlja1 not modelled 8.2 43 Fold:6-phosphogluconate dehydrogenase C-terminal domain-like Superfamily:6-phosphogluconate dehydrogenase C-terminal domain-like Family:UDP-glucose/GDP-mannose dehydrogenase dimerisation domain 35 c2jgoC_ not modelled 7.8 50 PDB header:de novo protein Chain: C: PDB Molecule:coil ser l9c; PDBTitle: stucture of the arsenated de novo designed peptide coil ser2 l9c 36 c3ljmA_ not modelled 7.8 50 PDB header:de novo protein Chain: A: PDB Molecule:coil ser l9c; PDBTitle: structure of de novo designed apo peptide coil ser l9c 37 c2jgoA_ not modelled 7.8 50 PDB header:de novo protein Chain: A: PDB Molecule:coil ser l9c; PDBTitle: stucture of the arsenated de novo designed peptide coil ser2 l9c 38 c3ljmB_ not modelled 7.8 50 PDB header:de novo protein Chain: B: PDB Molecule:coil ser l9c; PDBTitle: structure of de novo designed apo peptide coil ser l9c 39 c3ljmC_ not modelled 7.8 50 PDB header:de novo protein Chain: C: PDB Molecule:coil ser l9c; PDBTitle: structure of de novo designed apo peptide coil ser l9c 40 c2jgoB_ not modelled 7.8 50 PDB header:de novo protein Chain: B: PDB Molecule:coil ser l9c; PDBTitle: stucture of the arsenated de novo designed peptide coil ser2 l9c 41 d1vq3a_ not modelled 7.5 17 Fold:PurS-like Superfamily:PurS-like Family:PurS subunit of FGAM synthetase 42 c3hroA_ not modelled 7.5 35 PDB header:transport protein Chain: A: PDB Molecule:transient receptor potential (trp) channel PDBTitle: crystal structure of a c-terminal coiled coil domain of2 transient receptor potential (trp) channel subfamily p3 member 2 (trpp2, polycystic kidney disease 2) 43 c2pnvA_ not modelled 7.5 20 PDB header:membrane protein Chain: A: PDB Molecule:small conductance calcium-activated potassium PDBTitle: crystal structure of the leucine zipper domain of small-2 conductance ca2+-activated k+ (skca) channel from rattus3 norvegicus 44 c3rj1S_ not modelled 7.4 31 PDB header:transcription Chain: S: PDB Molecule:mediator of rna polymerase ii transcription subunit 18; PDBTitle: architecture of the mediator head module 45 d2nvna1 not modelled 7.2 50 Fold:ssDNA-binding transcriptional regulator domain Superfamily:ssDNA-binding transcriptional regulator domain Family:PMN2A0962/syc2379c-like 46 d1hn0a2 not modelled 7.1 38 Fold:Galactose-binding domain-like Superfamily:Galactose-binding domain-like Family:Chondroitin ABC lyase I, N-terminal domain 47 d1tfpa_ not modelled 7.0 25 Fold:Prealbumin-like Superfamily:Transthyretin (synonym: prealbumin) Family:Transthyretin (synonym: prealbumin) 48 c3ssbJ_ not modelled 6.9 57 PDB header:hydrolase/hydrolase inhibitor Chain: J: PDB Molecule:inducible metalloproteinase inhibitor protein; PDBTitle: structure of insect metalloproteinase inhibitor in complex with2 thermolysin 49 c1q2kA_ not modelled 6.7 46 PDB header:toxin Chain: A: PDB Molecule:neurotoxin bmk37; PDBTitle: solution structure of bmbktx1 a new potassium channel2 blocker from the chinese scorpion buthus martensi karsch 50 d1k8ib2 not modelled 6.5 37 Fold:MHC antigen-recognition domain Superfamily:MHC antigen-recognition domain Family:MHC antigen-recognition domain 51 c3e8yX_ not modelled 6.5 46 PDB header:toxin Chain: X: PDB Molecule:potassium channel toxin alpha-ktx 19.1; PDBTitle: xray structure of scorpion toxin bmbktx1 52 c2fwvA_ not modelled 6.2 24 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:hypothetical protein mtubf_01000852; PDBTitle: crystal structure of rv0813 53 c2jmzA_ not modelled 6.1 13 PDB header:unknown function Chain: A: PDB Molecule:hypothetical protein mj0781; PDBTitle: solution structure of a klba intein precursor from2 methanococcus jannaschii 54 d1eaic_ not modelled 6.0 50 Fold:Serine protease inhibitors Superfamily:Serine protease inhibitors Family:ATI-like 55 d1mylb_ not modelled 5.9 50 Fold:Ribbon-helix-helix Superfamily:Ribbon-helix-helix Family:Arc/Mnt-like phage repressors 56 c1i4oC_ not modelled 5.9 67 PDB header:apoptosis/hydrolase Chain: C: PDB Molecule:baculoviral iap repeat-containing protein 4; PDBTitle: crystal structure of the xiap/caspase-7 complex 57 d1f86a_ not modelled 5.9 18 Fold:Prealbumin-like Superfamily:Transthyretin (synonym: prealbumin) Family:Transthyretin (synonym: prealbumin) 58 d1un7a1 not modelled 5.9 40 Fold:Composite domain of metallo-dependent hydrolases Superfamily:Composite domain of metallo-dependent hydrolases Family:N-acetylglucosamine-6-phosphate deacetylase, NagA 59 d1t11a2 not modelled 5.9 17 Fold:Ribosome binding domain-like Superfamily:Trigger factor ribosome-binding domain Family:Trigger factor ribosome-binding domain 60 c3u5ga_ not modelled 5.9 43 PDB header:ribosome Chain: A: PDB Molecule:40s ribosomal protein s0-a; PDBTitle: the structure of the eukaryotic ribosome at 3.0 a resolution 61 d1oo2a_ not modelled 5.9 21 Fold:Prealbumin-like Superfamily:Transthyretin (synonym: prealbumin) Family:Transthyretin (synonym: prealbumin) 62 c1i7wB_ not modelled 5.8 40 PDB header:cell adhesion Chain: B: PDB Molecule:epithelial-cadherin; PDBTitle: beta-catenin/phosphorylated e-cadherin complex 63 c2xzn5_ not modelled 5.8 43 PDB header:ribosome Chain: 5: PDB Molecule:ribosomal protein s26e containing protein; PDBTitle: crystal structure of the eukaryotic 40s ribosomal2 subunit in complex with initiation factor 1. this file3 contains the 40s subunit and initiation factor for4 molecule 2 64 c2zw2B_ not modelled 5.6 17 PDB header:ligase Chain: B: PDB Molecule:putative uncharacterized protein sts178; PDBTitle: crystal structure of formylglycinamide ribonucleotide amidotransferase2 iii from sulfolobus tokodaii (stpurs) 65 c2dadA_ not modelled 5.6 20 PDB header:oncoprotein Chain: A: PDB Molecule:absent in melanoma 1 protein; PDBTitle: solution structure of the fifth crystall domain of the non-2 lens protein, absent in melanoma 1 66 c3batB_ not modelled 5.6 33 PDB header:contractile protein Chain: B: PDB Molecule:myosin heavy chain, striated muscle/general PDBTitle: crystal structure of the n-terminal region of the scallop2 myosin rod, monoclinic (p21) form 67 d2uubc1 not modelled 5.4 36 Fold:Alpha-lytic protease prodomain-like Superfamily:Prokaryotic type KH domain (KH-domain type II) Family:Prokaryotic type KH domain (KH-domain type II) 68 d1kgia_ not modelled 5.3 18 Fold:Prealbumin-like Superfamily:Transthyretin (synonym: prealbumin) Family:Transthyretin (synonym: prealbumin) 69 d1okia1 not modelled 5.3 44 Fold:gamma-Crystallin-like Superfamily:gamma-Crystallin-like Family:Crystallins/Ca-binding development proteins 70 d1ataa_ not modelled 5.2 42 Fold:Serine protease inhibitors Superfamily:Serine protease inhibitors Family:ATI-like 71 d1rhoa_ not modelled 5.2 14 Fold:Immunoglobulin-like beta-sandwich Superfamily:E set domains Family:RhoGDI-like 72 d1u58a2 not modelled 5.1 38 Fold:MHC antigen-recognition domain Superfamily:MHC antigen-recognition domain Family:MHC antigen-recognition domain 73 d1t6ca2 not modelled 5.1 21 Fold:Ribonuclease H-like motif Superfamily:Actin-like ATPase domain Family:Ppx/GppA phosphatase

Binding site prediction

Due to computational demand, binding site predictions are not run for batch jobs

If you want to predict binding sites, please manually submit your model of choice to 3DLigandSite

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
If you use the binding site predictions from 3DLigandSite, please also cite:
3DLigandSite: predicting ligand-binding sites using similar structures.
Wass MN, Kelley LA and Sternberg MJ Nucleic Acids Research 38, W469-73 (2010) [PubMed]
© Structural Bioinformatics Group Imperial College London Lawrence Kelley, Benjamin Jefferys Disclaimer Terms and Conditions	Component software Template detection: HHpred 1.51 Secondary structure prediction: Psi-pred 2.5 Disorder prediction: Disopred 2.4 Transmembrane prediction: Memsat_SVM Multi-template modelling and ab initio: Poing 1.0