Standard Mode | Switch to Expert Mode | Login to view past jobsRetrieve Phyre Job Id
 
Subscribe to Phyre at Google Groups
Email:
Visit Phyre at Google Groups
 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c3gg2B_

Fold library idPDB HeaderMoleculeTitle
c3gg2B_PDB header: oxidoreductaseChain: B: PDB Molecule: sugar dehydrogenase, udp-glucose/gdp-mannosePDBTitle: crystal structure of udp-glucose 6-dehydrogenase from2 porphyromonas gingivalis bound to product udp-glucuronate


Added to library: Sat Aug 28 15:44:29 2010
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence LDIAVVGIGYVGLVSATCFAELGANVRCIDTDRNKIEQLNSGTIPIYEPGLEKMIARNVKAGRLRFGTEI
Predicted secondary structure






















SS confidence





































































Known secondary structure (DSSP)


STT

S
TT

SS

TTTTSS
 .........80.........90.........100.........110.........120.........130.........140
Sequence EQAVPEADIIFIAVGTPAGEDGSADMSYVLDAARSIGRAMSRYILIVTKSTVPVGSYRLIRKAIQEELDK
Predicted secondary structure



























SS confidence





































































Known secondary structure (DSSP) GGG
S




B
TTSSB



S


S


TT
 .........150.........160.........170.........180.........190.........200.........210
Sequence REVLIDFDIASNPEFLKEGNAIDDFMKPDRVVVGVDSDRARELITSLYKPMLRVLFMDIASAEMTKYAAN
Predicted secondary structure



























SS confidence





































































Known secondary structure (DSSP) TT










TTSS
S

SSTTT


 .........220.........230.........240.........250.........260.........270.........280
Sequence AMLATRISFMNDVANLCERVGADVSMVRLGIGSDSRIGSKFLYPGCGYGGSCFPKDVKALIRTAEDNGYR
Predicted secondary structure


























SS confidence





































































Known secondary structure (DSSP) T

TSTTT
SSS


SS


SSSTT

 .........290.........300.........310.........320.........330.........340.........350
Sequence MEVLEAVERVNEKQKSILFDKFSTYYKGNVQGRCVAIWGLSFKPGTDDMREAPSLVLIEKLLEVGCRVRV
Predicted secondary structure


















SS confidence





































































Known secondary structure (DSSP)
TTTTT

TT


SSSTT



TT
TT
 .........360.........370.........380.........390.........400.........410.........420
Sequence YDPVAMKEAQKRLGDKVEYTTDMYDAVRGAEALFHVTEWKEFRMPDWSALSQAMAASLVIDGRNVYELFT
Predicted secondary structure































SS confidence





































































Known secondary structure (DSSP)
TTTGGGS
SSTT
S

S

GGGSS

TTSSS
SS





 .....
Sequence LLNIG
Predicted secondary structure

SS confidence




Known secondary structure (DSSP)


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


Phyre is now FREE for commercial users!

All images and data generated by Phyre2 are free to use in any publication with acknowledgement

Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
© Structural Bioinformatics Group, Imperial College, London
Michael Sternberg 
Disclaimer
Terms and Conditions
Structural Biology Group logo Imperial logo
BBSRC logo
Phyre2 is part of Genome3D