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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c3ojlA_

Fold library idPDB HeaderMoleculeTitle
c3ojlA_PDB header: oxidoreductaseChain: A: PDB Molecule: cap5o;PDBTitle: native structure of the udp-n-acetyl-mannosamine dehydrogenase cap5o2 from staphylococcus aureus


Added to library: Sat Mar 26 08:52:40 2011
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence SKLTVVGLGYIGLPTSIMFAKHGVDVLGVDINQQTIDKLQNGQISIEEPGLQEVYEEVLSSGKLKVSTTP
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Known secondary structure (DSSP)


STTTT

S
TT

SS

TTTTSSS
 .........80.........90.........100.........110.........120.........130.........140
Sequence EASDVFIIAVPTPNNDDQYRSCDISLVMRALDSILPFLKKGNTIIVESTIAPKTMDDFVKPVIENLGFTI
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Known secondary structure (DSSP)


S




B
SSTT

B

GGG

TT

S


TTTTTT

B
 .........150.........160.........170.........180.........190.........200.........210
Sequence GEDIYLVHCPERVLPGKILEELVHNNRIIGGVTKACIEAGKRVYRTFVQGEMIETDARTAEMSKLMENTY
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Known secondary structure (DSSP) TTTB





SS
S
SSTTT

S
 .........220.........230.........240.........250.........260.........270.........280
Sequence RDVNIALANELTKICNNLNINVLDVIEMANKHPRVNIHQPGPGVGGHCLAVDPYFIIAKDPENAKLIQTG
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Known secondary structure (DSSP) TT

TTSTT






S



TTTSTTT
 .........290.........300.........310.........320.........330.........340.........350
Sequence REINNSMPAYVVDTTKQIIKALSGNKVTVFGLTYKGDVDDIRESPAFDIYELLNQEPDIEVCAYDPHVEL
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Known secondary structure (DSSP) SS



SSSTT



SS

TT



SSS

 .........360.........370.........380.........390.........400.........410........
Sequence DFVEHDMSHAVKDASLVLILSDHSEFKNLSDSHFDKMKHKVIFDTKNVVKSSFEDVLYYNYGNIFNFI
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Known secondary structure (DSSP) TT



TT
S

S

GGGSS

TTTTTT
SS
SS



S

SSS
TTTGGGT


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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