Email l.a.kelley@imperial.ac.uk Description P0ABZ1 Date Thu Jan 5 11:16:43 GMT 2012 Unique Job ID 3a503345665e135a

Detailed template information

# Template Alignment Coverage 3D Model Confidence % i.d. Template Information

1 c3hjlA_ 100.0 28 PDB header:proton transport Chain: A: PDB Molecule:flagellar motor switch protein flig; PDBTitle: the structure of full-length flig from aquifex aeolicus 2 c3pl4A_ 100.0 31 PDB header:motor protein Chain: A: PDB Molecule:flagellar motor switch protein; PDBTitle: crystal structure of flig (residue 116-343) from h. pylori 3 c3pkrA_ 100.0 33 PDB header:motor protein Chain: A: PDB Molecule:flagellar motor switch protein; PDBTitle: crystal structure of flig (residue 86-343) from h. pylori 4 d1lkvx_ 100.0 42 Fold:alpha-alpha superhelix Superfamily:FliG Family:FliG 5 d1qc7a_ 100.0 53 Fold:alpha-alpha superhelix Superfamily:FliG Family:FliG 6 d1qc7b_ 100.0 54 Fold:alpha-alpha superhelix Superfamily:FliG Family:FliG 7 c3sohB_ 99.8 29 PDB header:motor protein Chain: B: PDB Molecule:flagellar motor switch protein flig; PDBTitle: architecture of the flagellar rotor 8 d2ouxa1 98.5 15 Fold:alpha-alpha superhelix Superfamily:MgtE N-terminal domain-like Family:MgtE N-terminal domain-like 9 c2ouxB_ 98.3 15 PDB header:transport protein Chain: B: PDB Molecule:magnesium transporter; PDBTitle: crystal structure of the soluble part of a magnesium transporter 10 d2yvxa1 98.1 14 Fold:alpha-alpha superhelix Superfamily:MgtE N-terminal domain-like Family:MgtE N-terminal domain-like 11 c2yvxD_ 96.7 21 PDB header:transport protein Chain: D: PDB Molecule:mg2+ transporter mgte; PDBTitle: crystal structure of magnesium transporter mgte 12 c2yvzA_ 96.6 17 PDB header:transport protein Chain: A: PDB Molecule:mg2+ transporter mgte; PDBTitle: crystal structure of magnesium transporter mgte cytosolic domain,2 mg2+-free form 13 c3b37A_ 94.3 14 PDB header:hydrolase Chain: A: PDB Molecule:aminopeptidase n; PDBTitle: crystal structure of e. coli aminopeptidase n in complex with tyrosine 14 c2kn6A_ 87.2 13 PDB header:apoptosis Chain: A: PDB Molecule:apoptosis-associated speck-like protein containing a card; PDBTitle: structure of full-length human asc (apoptosis-associated speck-like2 protein containing a card) 15 c3ebhA_ 78.2 8 PDB header:hydrolase inhibitor Chain: A: PDB Molecule:m1 family aminopeptidase; PDBTitle: structure of the m1 alanylaminopeptidase from malaria complexed with2 bestatin 16 c1hjpA_ 76.2 12 PDB header:dna recombination Chain: A: PDB Molecule:ruva; PDBTitle: holliday junction binding protein ruva from e. coli 17 c1d8lA_ 72.0 13 PDB header:gene regulation Chain: A: PDB Molecule:protein (holliday junction dna helicase ruva); PDBTitle: e. coli holliday junction binding protein ruva nh2 region2 lacking domain iii 18 d1cuka2 70.9 13 Fold:SAM domain-like Superfamily:RuvA domain 2-like Family:DNA helicase RuvA subunit, middle domain 19 d1ixra1 56.9 16 Fold:SAM domain-like Superfamily:RuvA domain 2-like Family:DNA helicase RuvA subunit, middle domain 20 c2h5xA_ 56.6 12 PDB header:dna binding protein Chain: A: PDB Molecule:holliday junction atp-dependent dna helicase ruva; PDBTitle: ruva from mycobacterium tuberculosis 21 d1bvsa2 not modelled 56.3 14 Fold:SAM domain-like Superfamily:RuvA domain 2-like Family:DNA helicase RuvA subunit, middle domain 22 c2x49A_ not modelled 49.4 18 PDB header:protein transport Chain: A: PDB Molecule:invasion protein inva; PDBTitle: crystal structure of the c-terminal domain of inva 23 c1ixrA_ not modelled 49.4 16 PDB header:hydrolase Chain: A: PDB Molecule:holliday junction dna helicase ruva; PDBTitle: ruva-ruvb complex 24 d1bh9b_ not modelled 46.4 20 Fold:Histone-fold Superfamily:Histone-fold Family:TBP-associated factors, TAFs 25 c3lk2B_ not modelled 38.7 14 PDB header:protein binding Chain: B: PDB Molecule:f-actin-capping protein subunit beta isoforms 1 and 2; PDBTitle: crystal structure of capz bound to the uncapping motif from carmil 26 d1iznb_ not modelled 34.2 14 Fold:Subunits of heterodimeric actin filament capping protein Capz Superfamily:Subunits of heterodimeric actin filament capping protein Capz Family:Capz beta-1 subunit 27 d2af7a1 not modelled 33.6 18 Fold:AhpD-like Superfamily:AhpD-like Family:CMD-like 28 d1szaa_ not modelled 28.0 8 Fold:alpha-alpha superhelix Superfamily:ENTH/VHS domain Family:RPR domain (SMART 00582 ) 29 c3kxrA_ not modelled 27.6 22 PDB header:transport protein Chain: A: PDB Molecule:magnesium transporter, putative; PDBTitle: structure of the cystathionine beta-synthase pair domain of the2 putative mg2+ transporter so5017 from shewanella oneidensis mr-1. 30 c1lj2B_ not modelled 26.2 21 PDB header:viral protein/ translation Chain: B: PDB Molecule:nonstructural rna-binding protein 34; PDBTitle: recognition of eif4g by rotavirus nsp3 reveals a basis for2 mrna circularization 31 c2w9yA_ not modelled 24.7 9 PDB header:lipid transport Chain: A: PDB Molecule:fatty acid/retinol binding protein protein 7, PDBTitle: the structure of the lipid binding protein ce-far-7 from2 caenorhabditis elegans 32 d1x2ia1 not modelled 24.2 18 Fold:SAM domain-like Superfamily:RuvA domain 2-like Family:Hef domain-like 33 c2kvcA_ not modelled 23.8 18 PDB header:unknown function Chain: A: PDB Molecule:putative uncharacterized protein; PDBTitle: solution structure of the mycobacterium tuberculosis protein rv0543c,2 a member of the duf3349 superfamily. seattle structural genomics3 center for infectious disease target mytud.17112.a 34 c2lkyA_ not modelled 23.7 6 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:uncharacterized protein; PDBTitle: solution structure of msmeg_1053, the second duf3349 annotated protein2 in the genome of mycobacterium smegmatis, seattle structural genomics3 center for infectious disease target mysma.17112.b 35 d1mpga1 not modelled 23.5 13 Fold:DNA-glycosylase Superfamily:DNA-glycosylase Family:DNA repair glycosylase, 2 C-terminal domains 36 d2i0za2 not modelled 23.4 16 Fold:HI0933 insert domain-like Superfamily:HI0933 insert domain-like Family:HI0933 insert domain-like 37 c3thgA_ not modelled 20.8 3 PDB header:protein binding Chain: A: PDB Molecule:ribulose bisphosphate carboxylase/oxygenase activase 1, PDBTitle: crystal structure of the creosote rubisco activase c-domain 38 c3dadA_ not modelled 19.6 15 PDB header:signaling protein Chain: A: PDB Molecule:fh1/fh2 domain-containing protein 1; PDBTitle: crystal structure of the n-terminal regulatory domains of2 the formin fhod1 39 d2bgwa1 not modelled 19.3 17 Fold:SAM domain-like Superfamily:RuvA domain 2-like Family:Hef domain-like 40 c8iczA_ not modelled 19.3 17 PDB header:transferase/dna Chain: A: PDB Molecule:protein (dna polymerase beta (e.c.2.7.7.7)); PDBTitle: dna polymerase beta (pol b) (e.c.2.7.7.7) complexed with2 seven base pairs of dna; soaked in the presence of of datp3 (1 millimolar), mncl2 (5 millimolar), and lithium sulfate4 (75 millimolar) 41 d2peoa1 not modelled 18.9 16 Fold:RbcX-like Superfamily:RbcX-like Family:RbcX-like 42 c2peoA_ not modelled 18.9 16 PDB header:chaperone Chain: A: PDB Molecule:rbcx protein; PDBTitle: crystal structure of rbcx from anabaena ca 43 c2l0kA_ not modelled 18.5 18 PDB header:transcription Chain: A: PDB Molecule:stage iii sporulation protein d; PDBTitle: nmr solution structure of a transcription factor spoiiid in complex2 with dna 44 d2d1ha1 not modelled 18.3 11 Fold:DNA/RNA-binding 3-helical bundle Superfamily:"Winged helix" DNA-binding domain Family:TrmB-like 45 c2ihmA_ not modelled 17.4 19 PDB header:transferase/dna Chain: A: PDB Molecule:dna polymerase mu; PDBTitle: polymerase mu in ternary complex with gapped 11mer dna2 duplex and bound incoming nucleotide 46 d1bh9a_ not modelled 16.9 15 Fold:Histone-fold Superfamily:Histone-fold Family:TBP-associated factors, TAFs 47 d1nexb1 not modelled 16.7 10 Fold:F-box domain Superfamily:F-box domain Family:F-box domain 48 d2efva1 not modelled 15.6 19 Fold:Ribbon-helix-helix Superfamily:Ribbon-helix-helix Family:MJ0366-like 49 d2a0ma1 not modelled 15.4 15 Fold:Arginase/deacetylase Superfamily:Arginase/deacetylase Family:Arginase-like amidino hydrolases 50 d1y0na_ not modelled 14.5 19 Fold:YehU-like Superfamily:YehU-like Family:YehU-like 51 d1pzna1 not modelled 14.4 12 Fold:SAM domain-like Superfamily:Rad51 N-terminal domain-like Family:DNA repair protein Rad51, N-terminal domain 52 d1dgna_ not modelled 14.3 18 Fold:DEATH domain Superfamily:DEATH domain Family:Caspase recruitment domain, CARD 53 d1i5za1 not modelled 13.8 12 Fold:DNA/RNA-binding 3-helical bundle Superfamily:"Winged helix" DNA-binding domain Family:CAP C-terminal domain-like 54 c2d0sA_ not modelled 13.7 0 PDB header:electron transport Chain: A: PDB Molecule:cytochrome c; PDBTitle: crystal structure of the cytochrome c552 from moderate2 thermophilic bacterium, hydrogenophilus thermoluteolus 55 d1dgsa1 not modelled 13.2 20 Fold:SAM domain-like Superfamily:RuvA domain 2-like Family:NAD+-dependent DNA ligase, domain 3 56 c1qzeA_ not modelled 13.1 15 PDB header:replication Chain: A: PDB Molecule:uv excision repair protein rad23 homolog a; PDBTitle: hhr23a protein structure based on residual dipolar coupling2 data 57 d1cc5a_ not modelled 12.4 17 Fold:Cytochrome c Superfamily:Cytochrome c Family:monodomain cytochrome c 58 c2jxuA_ not modelled 12.3 13 PDB header:unknown function Chain: A: PDB Molecule:terb; PDBTitle: nmr solution structure of kp-terb, a tellurite resistance2 protein from klebsiella pneumoniae 59 c2kwuA_ not modelled 12.1 9 PDB header:protein binding/signaling protein Chain: A: PDB Molecule:dna polymerase iota; PDBTitle: solution structure of ubm2 of murine polymerase iota in complex with2 ubiquitin 60 c3hjbA_ not modelled 11.9 8 PDB header:isomerase Chain: A: PDB Molecule:glucose-6-phosphate isomerase; PDBTitle: 1.5 angstrom crystal structure of glucose-6-phosphate isomerase from2 vibrio cholerae. 61 d1m8za_ not modelled 11.6 9 Fold:alpha-alpha superhelix Superfamily:ARM repeat Family:Pumilio repeat 62 d1htaa_ not modelled 11.3 15 Fold:Histone-fold Superfamily:Histone-fold Family:Archaeal histone 63 c2gtqA_ not modelled 11.3 16 PDB header:hydrolase Chain: A: PDB Molecule:aminopeptidase n; PDBTitle: crystal structure of aminopeptidase n from human pathogen neisseria2 meningitidis 64 d1y6xa1 not modelled 11.1 12 Fold:all-alpha NTP pyrophosphatases Superfamily:all-alpha NTP pyrophosphatases Family:HisE-like (PRA-PH) 65 d1tuza_ not modelled 11.0 20 Fold:EF Hand-like Superfamily:EF-hand Family:EF-hand modules in multidomain proteins 66 c2qezC_ not modelled 10.8 11 PDB header:lyase Chain: C: PDB Molecule:ethanolamine ammonia-lyase heavy chain; PDBTitle: crystal structure of ethanolamine ammonia-lyase heavy chain2 (yp_013784.1) from listeria monocytogenes 4b f2365 at 2.15 a3 resolution 67 d1ffgb_ not modelled 10.2 18 Fold:Ferredoxin-like Superfamily:CheY-binding domain of CheA Family:CheY-binding domain of CheA 68 c2krcA_ not modelled 10.2 20 PDB header:transcription Chain: A: PDB Molecule:dna-directed rna polymerase subunit delta; PDBTitle: solution structure of the n-terminal domain of bacillus2 subtilis delta subunit of rna polymerase 69 c2l6aA_ not modelled 10.0 13 PDB header:signaling protein Chain: A: PDB Molecule:nacht, lrr and pyd domains-containing protein 12; PDBTitle: three-dimensional structure of the n-terminal effector pyrin domain of2 nlrp12 70 d2b0la1 not modelled 10.0 22 Fold:DNA/RNA-binding 3-helical bundle Superfamily:"Winged helix" DNA-binding domain Family:CodY HTH domain 71 c3nbuC_ not modelled 10.0 8 PDB header:isomerase Chain: C: PDB Molecule:glucose-6-phosphate isomerase; PDBTitle: crystal structure of pgi glucosephosphate isomerase 72 d2a7wa1 not modelled 10.0 11 Fold:all-alpha NTP pyrophosphatases Superfamily:all-alpha NTP pyrophosphatases Family:HisE-like (PRA-PH) 73 c2a7wF_ not modelled 10.0 11 PDB header:hydrolase Chain: F: PDB Molecule:phosphoribosyl-atp pyrophosphatase; PDBTitle: crystal structure of phosphoribosyl-atp pyrophosphatase2 from chromobacterium violaceum (atcc 12472). nesg target3 cvr7 74 c1a0oH_ not modelled 9.9 18 PDB header:chemotaxis Chain: H: PDB Molecule:chea; PDBTitle: chey-binding domain of chea in complex with chey 75 c3g2bA_ not modelled 9.9 14 PDB header:biosynthetic protein Chain: A: PDB Molecule:coenzyme pqq synthesis protein d; PDBTitle: crystal structure of pqqd from xanthomonas campestris 76 d1nira1 not modelled 9.7 9 Fold:Cytochrome c Superfamily:Cytochrome c Family:N-terminal (heme c) domain of cytochrome cd1-nitrite reductase 77 c2jmkA_ not modelled 9.7 20 PDB header:protein binding Chain: A: PDB Molecule:hypothetical protein ta0956; PDBTitle: solution structure of ta0956 78 c3ka1A_ not modelled 9.7 16 PDB header:chaperone Chain: A: PDB Molecule:rbcx protein; PDBTitle: crystal structure of rbcx from thermosynechococcus elongatus 79 d1dvha_ not modelled 9.6 28 Fold:Cytochrome c Superfamily:Cytochrome c Family:monodomain cytochrome c 80 c2vckC_ not modelled 9.5 28 PDB header:oxidoreductase Chain: C: PDB Molecule:cyanobacterial phycoerythrobilin; PDBTitle: structure of phycoerythrobilin synthase pebs from the2 cyanophage p-ssm2 in complex with the bound substrate3 biliverdin ixa 81 d1hiob_ not modelled 9.3 15 Fold:Histone-fold Superfamily:Histone-fold Family:Nucleosome core histones 82 d1a56a_ not modelled 9.2 11 Fold:Cytochrome c Superfamily:Cytochrome c Family:monodomain cytochrome c 83 d1p3mh_ not modelled 9.1 17 Fold:Histone-fold Superfamily:Histone-fold Family:Nucleosome core histones 84 c2km6A_ not modelled 9.0 4 PDB header:signaling protein, protein binding Chain: A: PDB Molecule:nacht, lrr and pyd domains-containing protein 7; PDBTitle: nmr structure of the nlrp7 pyrin domain 85 d1c53a_ not modelled 8.9 22 Fold:Cytochrome c Superfamily:Cytochrome c Family:monodomain cytochrome c 86 c1cauB_ not modelled 8.8 11 PDB header:seed storage protein Chain: B: PDB Molecule:canavalin; PDBTitle: determination of three crystal structures of canavalin by molecular2 replacement 87 d2h6ca1 not modelled 8.6 18 Fold:DNA/RNA-binding 3-helical bundle Superfamily:"Winged helix" DNA-binding domain Family:CAP C-terminal domain-like 88 d1uija1 not modelled 8.6 11 Fold:Double-stranded beta-helix Superfamily:RmlC-like cupins Family:Germin/Seed storage 7S protein 89 c2qwwB_ not modelled 8.5 24 PDB header:transcription Chain: B: PDB Molecule:transcriptional regulator, marr family; PDBTitle: crystal structure of multiple antibiotic-resistance repressor (marr)2 (yp_013417.1) from listeria monocytogenes 4b f2365 at 2.07 a3 resolution 90 c1qloA_ not modelled 8.3 33 PDB header:membrane proteins Chain: A: PDB Molecule:herpes simplex virus protein icp47; PDBTitle: structure of the active domain of the herpes simplex virus2 protein icp47 in water/sodium dodecyl sulfate solution3 determined by nuclear magnetic resonance spectroscopy 91 c2k4bA_ not modelled 8.2 15 PDB header:dna binding protein Chain: A: PDB Molecule:transcriptional regulator; PDBTitle: copr repressor structure 92 d1huua_ not modelled 8.2 19 Fold:IHF-like DNA-binding proteins Superfamily:IHF-like DNA-binding proteins Family:Prokaryotic DNA-bending protein 93 c2zzsW_ not modelled 8.1 22 PDB header:electron transport Chain: W: PDB Molecule: PDBTitle: crystal structure of cytochrome c554 from vibrio2 parahaemolyticus strain rimd2210633 94 c1dgrW_ not modelled 8.1 7 PDB header:plant protein Chain: W: PDB Molecule:canavalin; PDBTitle: refined crystal structure of canavalin from jack bean 95 d2phla1 not modelled 8.0 19 Fold:Double-stranded beta-helix Superfamily:RmlC-like cupins Family:Germin/Seed storage 7S protein 96 c3fgxA_ not modelled 7.8 4 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:rbstp2171; PDBTitle: structure of uncharacterised protein rbstp2171 from bacillus2 stearothermophilus 97 d1m70a2 not modelled 7.7 22 Fold:Cytochrome c Superfamily:Cytochrome c Family:Two-domain cytochrome c 98 d1k1va_ not modelled 7.7 22 Fold:A DNA-binding domain in eukaryotic transcription factors Superfamily:A DNA-binding domain in eukaryotic transcription factors Family:A DNA-binding domain in eukaryotic transcription factors 99 d1cora_ not modelled 7.5 11 Fold:Cytochrome c Superfamily:Cytochrome c Family:monodomain cytochrome c