PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c3lk2B_

Fold library id	PDB Header	Molecule	Title
c3lk2B_	PDB header: protein binding	Chain: B: PDB Molecule: f-actin-capping protein subunit beta isoforms 1	PDBTitle: crystal structure of capz bound to the uncapping motif from2 carmil

Links to external resources
Added to library: Sun Aug 29 03:53:26 2010

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence S D Q Q L D C A L D L M R R L P P Q Q I E K N L S D L I D L V P S L C E D L L S S V D Q P L K I A R D K V V G K D Y L L C D Y N R D G D S Y

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T S
G G G
G G G
T T T T
G G G T T

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence R S P W S N K Y D P P L E D G A M P S A R L R K L E V E A N N A F D Q Y R D L Y F E G G V S S V Y L W D L D H G F A G V I L I K K A G D G S

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T T
S
S S
S S S T T
T T

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence K K I K G C W D S I H V V E V Q E K S S G R T A H Y K L T S T V M L W L Q T N K T G S G T M N L G G S L T R Q M E K D E T V S D S S P H I A

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S S
T T S S S S
S T T
B T T B

. . . . . . . . . 220 . . . . . . . . . 230 . . . . . . . . . 240 . .

Sequence N I G R L V E D M E N K I R S T L N E I Y F G K T K D I V N G L

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	S	D	Q	Q	L	D	C	A	L	D	L	M	R	R	L	P	P	Q	Q	I	E	K	N	L	S	D	L	I	D	L	V	P	S	L	C	E	D	L	L	S	S	V	D	Q	P	L	K	I	A	R	D	K	V	V	G	K	D	Y	L	L	C	D	Y	N	R	D	G	D	S	Y
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)													T	T	S		G	G	G													G	G	G																		T	T	T	T							G	G	G			T	T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	R	S	P	W	S	N	K	Y	D	P	P	L	E	D	G	A	M	P	S	A	R	L	R	K	L	E	V	E	A	N	N	A	F	D	Q	Y	R	D	L	Y	F	E	G	G	V	S	S	V	Y	L	W	D	L	D	H	G	F	A	G	V	I	L	I	K	K	A	G	D	G	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			T	T	T					S			S	S																												S	S	S										T	T														T	T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	K	K	I	K	G	C	W	D	S	I	H	V	V	E	V	Q	E	K	S	S	G	R	T	A	H	Y	K	L	T	S	T	V	M	L	W	L	Q	T	N	K	T	G	S	G	T	M	N	L	G	G	S	L	T	R	Q	M	E	K	D	E	T	V	S	D	S	S	P	H	I	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S	S																	T	T	S	S																	S	S		S	T	T																			B	T	T	B
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.
Sequence	N	I	G	R	L	V	E	D	M	E	N	K	I	R	S	T	L	N	E	I	Y	F	G	K	T	K	D	I	V	N	G	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																							T