Email l.a.kelley@imperial.ac.uk Description P0ABR5 Date Thu Jan 5 11:16:07 GMT 2012 Unique Job ID 39a095706115e165

Detailed template information

# Template Alignment Coverage 3D Model Confidence % i.d. Template Information

1 c2gbxE_ 100.0 38 PDB header:oxidoreductase Chain: E: PDB Molecule:biphenyl 2,3-dioxygenase alpha subunit; PDBTitle: crystal structure of biphenyl 2,3-dioxygenase from sphingomonas2 yanoikuyae b1 bound to biphenyl 2 c2hmnA_ 100.0 36 PDB header:oxidoreductase Chain: A: PDB Molecule:naphthalene 1,2-dioxygenase alpha subunit; PDBTitle: crystal structure of the naphthalene 1,2-dioxygenase f352v2 mutant bound to anthracene. 3 c1wqlA_ 100.0 44 PDB header:oxidoreductase Chain: A: PDB Molecule:iron-sulfur protein large subunit of cumene dioxygenase; PDBTitle: cumene dioxygenase (cuma1a2) from pseudomonas fluorescens ip01 4 c1uljA_ 100.0 48 PDB header:oxidoreductase Chain: A: PDB Molecule:biphenyl dioxygenase large subunit; PDBTitle: biphenyl dioxygenase (bpha1a2) in complex with the substrate 5 c2b1xE_ 100.0 39 PDB header:oxidoreductase Chain: E: PDB Molecule:naphthalene dioxygenase large subunit; PDBTitle: crystal structure of naphthalene 1,2-dioxygenase from rhodococcus sp. 6 c3n0qA_ 100.0 22 PDB header:oxidoreductase Chain: A: PDB Molecule:putative aromatic-ring hydroxylating dioxygenase; PDBTitle: crystal structure of a putative aromatic-ring hydroxylating2 dioxygenase (tm1040_3219) from silicibacter sp. tm1040 at 1.80 a3 resolution 7 d1o7na2 100.0 30 Fold:TBP-like Superfamily:Bet v1-like Family:Ring hydroxylating alpha subunit catalytic domain 8 d1wqla2 100.0 38 Fold:TBP-like Superfamily:Bet v1-like Family:Ring hydroxylating alpha subunit catalytic domain 9 d2bmoa2 100.0 30 Fold:TBP-like Superfamily:Bet v1-like Family:Ring hydroxylating alpha subunit catalytic domain 10 d1ulia2 100.0 44 Fold:TBP-like Superfamily:Bet v1-like Family:Ring hydroxylating alpha subunit catalytic domain 11 d2b1xa2 100.0 34 Fold:TBP-like Superfamily:Bet v1-like Family:Ring hydroxylating alpha subunit catalytic domain 12 c3gteB_ 100.0 16 PDB header:electron transport, oxidoreductase Chain: B: PDB Molecule:ddmc; PDBTitle: crystal structure of dicamba monooxygenase with non-heme2 iron 13 c3gkqB_ 100.0 16 PDB header:oxidoreductase Chain: B: PDB Molecule:terminal oxygenase component of carbazole 1,9a- PDBTitle: terminal oxygenase of carbazole 1,9a-dioxygenase from2 novosphingobium sp. ka1 14 c3gcfC_ 100.0 18 PDB header:oxidoreductase Chain: C: PDB Molecule:terminal oxygenase component of carbazole 1,9a- PDBTitle: terminal oxygenase of carbazole 1,9a-dioxygenase from2 nocardioides aromaticivorans ic177 15 d1wqla1 100.0 56 Fold:ISP domain Superfamily:ISP domain Family:Ring hydroxylating alpha subunit ISP domain 16 c1z01D_ 100.0 16 PDB header:oxidoreductase Chain: D: PDB Molecule:2-oxo-1,2-dihydroquinoline 8-monooxygenase, PDBTitle: 2-oxoquinoline 8-monooxygenase component: active site2 modulation by rieske-[2fe-2s] center oxidation/reduction 17 d2b1xa1 100.0 48 Fold:ISP domain Superfamily:ISP domain Family:Ring hydroxylating alpha subunit ISP domain 18 d1ulia1 100.0 58 Fold:ISP domain Superfamily:ISP domain Family:Ring hydroxylating alpha subunit ISP domain 19 d2bmoa1 100.0 47 Fold:ISP domain Superfamily:ISP domain Family:Ring hydroxylating alpha subunit ISP domain 20 c2zylA_ 100.0 16 PDB header:oxidoreductase Chain: A: PDB Molecule:possible oxidoreductase; PDBTitle: crystal structure of 3-ketosteroid-9-alpha-hydroxylase2 (ksha) from m. tuberculosis 21 c2de7B_ not modelled 100.0 17 PDB header:oxidoreductase Chain: B: PDB Molecule:terminal oxygenase component of carbazole; PDBTitle: the substrate-bound complex between oxygenase and2 ferredoxin in carbazole 1,9a-dioxygenase 22 d1o7na1 not modelled 100.0 46 Fold:ISP domain Superfamily:ISP domain Family:Ring hydroxylating alpha subunit ISP domain 23 d1z01a1 not modelled 100.0 21 Fold:ISP domain Superfamily:ISP domain Family:Ring hydroxylating alpha subunit ISP domain 24 d2de6a1 not modelled 100.0 25 Fold:ISP domain Superfamily:ISP domain Family:Ring hydroxylating alpha subunit ISP domain 25 c3d89A_ not modelled 99.9 16 PDB header:electron transport Chain: A: PDB Molecule:rieske domain-containing protein; PDBTitle: crystal structure of a soluble rieske ferredoxin from mus musculus 26 d1vm9a_ not modelled 99.8 21 Fold:ISP domain Superfamily:ISP domain Family:Rieske iron-sulfur protein (ISP) 27 c2de7E_ not modelled 99.8 21 PDB header:oxidoreductase Chain: E: PDB Molecule:ferredoxin component of carbazole; PDBTitle: the substrate-bound complex between oxygenase and2 ferredoxin in carbazole 1,9a-dioxygenase 28 d2jzaa1 not modelled 99.8 14 Fold:ISP domain Superfamily:ISP domain Family:NirD-like 29 c3dqyA_ not modelled 99.8 20 PDB header:oxidoreductase Chain: A: PDB Molecule:toluene 1,2-dioxygenase system ferredoxin PDBTitle: crystal structure of toluene 2,3-dioxygenase ferredoxin 30 d3c0da1 not modelled 99.8 12 Fold:ISP domain Superfamily:ISP domain Family:NirD-like 31 c3gceA_ not modelled 99.8 22 PDB header:oxidoreductase Chain: A: PDB Molecule:ferredoxin component of carbazole 1,9a- PDBTitle: ferredoxin of carbazole 1,9a-dioxygenase from nocardioides2 aromaticivorans ic177 32 d1fqta_ not modelled 99.8 16 Fold:ISP domain Superfamily:ISP domain Family:Rieske iron-sulfur protein (ISP) 33 c2qpzA_ not modelled 99.8 22 PDB header:metal binding protein Chain: A: PDB Molecule:naphthalene 1,2-dioxygenase system ferredoxin PDBTitle: naphthalene 1,2-dioxygenase rieske ferredoxin 34 d2jo6a1 not modelled 99.8 14 Fold:ISP domain Superfamily:ISP domain Family:NirD-like 35 c2i7fB_ not modelled 99.7 22 PDB header:oxidoreductase Chain: B: PDB Molecule:ferredoxin component of dioxygenase; PDBTitle: sphingomonas yanoikuyae b1 ferredoxin 36 d1q90c_ not modelled 99.6 23 Fold:ISP domain Superfamily:ISP domain Family:Rieske iron-sulfur protein (ISP) 37 d1rfsa_ not modelled 99.6 24 Fold:ISP domain Superfamily:ISP domain Family:Rieske iron-sulfur protein (ISP) 38 d3cx5e1 not modelled 99.4 28 Fold:ISP domain Superfamily:ISP domain Family:Rieske iron-sulfur protein (ISP) 39 d2e74d1 not modelled 99.4 22 Fold:ISP domain Superfamily:ISP domain Family:Rieske iron-sulfur protein (ISP) 40 d1g8kb_ not modelled 99.4 18 Fold:ISP domain Superfamily:ISP domain Family:Rieske iron-sulfur protein (ISP) 41 d1riea_ not modelled 99.4 23 Fold:ISP domain Superfamily:ISP domain Family:Rieske iron-sulfur protein (ISP) 42 c2nvgA_ not modelled 99.3 19 PDB header:oxidoreductase Chain: A: PDB Molecule:ubiquinol-cytochrome c reductase iron-sulfur subunit; PDBTitle: soluble domain of rieske iron sulfur protein. 43 c2e76D_ not modelled 99.0 23 PDB header:photosynthesis Chain: D: PDB Molecule:cytochrome b6-f complex iron-sulfur subunit; PDBTitle: crystal structure of the cytochrome b6f complex with tridecyl-2 stigmatellin (tds) from m.laminosus 44 c2fynO_ not modelled 99.0 21 PDB header:oxidoreductase Chain: O: PDB Molecule:ubiquinol-cytochrome c reductase iron-sulfur PDBTitle: crystal structure analysis of the double mutant rhodobacter2 sphaeroides bc1 complex 45 d1nyka_ not modelled 98.9 24 Fold:ISP domain Superfamily:ISP domain Family:Rieske iron-sulfur protein (ISP) 46 c2fyuE_ not modelled 98.8 22 PDB header:oxidoreductase Chain: E: PDB Molecule:ubiquinol-cytochrome c reductase iron-sulfur subunit, PDBTitle: crystal structure of bovine heart mitochondrial bc1 with jg1442 inhibitor 47 c1p84E_ not modelled 98.3 25 PDB header:oxidoreductase Chain: E: PDB Molecule:ubiquinol-cytochrome c reductase iron-sulfur PDBTitle: hdbt inhibited yeast cytochrome bc1 complex 48 d1z01a2 not modelled 97.7 13 Fold:TBP-like Superfamily:Bet v1-like Family:Ring hydroxylating alpha subunit catalytic domain 49 d1jm1a_ not modelled 97.3 25 Fold:ISP domain Superfamily:ISP domain Family:Rieske iron-sulfur protein (ISP) 50 d2de6a2 not modelled 96.3 17 Fold:TBP-like Superfamily:Bet v1-like Family:Ring hydroxylating alpha subunit catalytic domain 51 d1uhva1 not modelled 31.4 28 Fold:Glycosyl hydrolase domain Superfamily:Glycosyl hydrolase domain Family:Composite domain of glycosyl hydrolase families 5, 30, 39 and 51 52 c3fcgB_ not modelled 29.7 27 PDB header:membrane protein, protein transport Chain: B: PDB Molecule:f1 capsule-anchoring protein; PDBTitle: crystal structure analysis of the middle domain of the2 caf1a usher 53 c3kv0A_ not modelled 28.3 43 PDB header:transport protein Chain: A: PDB Molecule:het-c2; PDBTitle: crystal structure of het-c2: a fungal glycolipid transfer protein2 (gltp) 54 d1mkna_ not modelled 24.1 67 Fold:Midkine Superfamily:Midkine Family:Midkine, a heparin-binding growth factor, N-terminal domain 55 d1wmxa_ not modelled 23.9 22 Fold:Galactose-binding domain-like Superfamily:Galactose-binding domain-like Family:Family 30 carbohydrate binding module, CBM30 (PKD repeat) 56 d2fu5a1 not modelled 23.8 25 Fold:Mss4-like Superfamily:Mss4-like Family:RabGEF Mss4 57 d1pwka_ not modelled 23.7 13 Fold:DLC Superfamily:DLC Family:DLC 58 c1ddzA_ not modelled 23.2 42 PDB header:lyase Chain: A: PDB Molecule:carbonic anhydrase; PDBTitle: x-ray structure of a beta-carbonic anhydrase from the red2 alga, porphyridium purpureum r-1 59 c1lshB_ not modelled 22.3 19 PDB header:lipid binding protein Chain: B: PDB Molecule:lipovitellin (lv-2); PDBTitle: lipid-protein interactions in lipovitellin 60 d1lshb_ not modelled 22.3 19 Fold:Lipovitellin-phosvitin complex; beta-sheet shell regions Superfamily:Lipovitellin-phosvitin complex; beta-sheet shell regions Family:Lipovitellin-phosvitin complex; beta-sheet shell regions 61 d1w91a1 not modelled 22.2 50 Fold:Glycosyl hydrolase domain Superfamily:Glycosyl hydrolase domain Family:Composite domain of glycosyl hydrolase families 5, 30, 39 and 51 62 d1hxra_ not modelled 21.5 25 Fold:Mss4-like Superfamily:Mss4-like Family:RabGEF Mss4 63 d3brda2 not modelled 18.6 35 Fold:Common fold of diphtheria toxin/transcription factors/cytochrome f Superfamily:p53-like transcription factors Family:DNA-binding protein LAG-1 (CSL) 64 d1ddza2 not modelled 18.6 42 Fold:Resolvase-like Superfamily:beta-carbonic anhydrase, cab Family:beta-carbonic anhydrase, cab 65 c2x3mA_ not modelled 18.4 33 PDB header:unknown function Chain: A: PDB Molecule:hypothetical protein orf239; PDBTitle: crystal structure of hypothetical protein orf239 from pyrobaculum2 spherical virus 66 c2wb6A_ not modelled 18.0 16 PDB header:viral protein Chain: A: PDB Molecule:afv1-102; PDBTitle: crystal structure of afv1-102, a protein from the acidianus2 filamentous virus 1 67 d3orca_ not modelled 16.7 24 Fold:lambda repressor-like DNA-binding domains Superfamily:lambda repressor-like DNA-binding domains Family:Phage repressors 68 c2c3yA_ not modelled 16.3 27 PDB header:oxidoreductase Chain: A: PDB Molecule:pyruvate-ferredoxin oxidoreductase; PDBTitle: crystal structure of the radical form of2 pyruvate:ferredoxin oxidoreductase from desulfovibrio3 africanus 69 c3lasA_ not modelled 15.5 29 PDB header:lyase Chain: A: PDB Molecule:putative carbonic anhydrase; PDBTitle: crystal structure of carbonic anhydrase from streptococcus mutans to2 1.4 angstrom resolution 70 d1nr3a_ not modelled 15.3 19 Fold:DNA-binding protein Tfx Superfamily:DNA-binding protein Tfx Family:DNA-binding protein Tfx 71 c1ylkA_ not modelled 14.4 29 PDB header:unknown function Chain: A: PDB Molecule:hypothetical protein rv1284/mt1322; PDBTitle: crystal structure of rv1284 from mycobacterium tuberculosis in complex2 with thiocyanate 72 d1swxa_ not modelled 14.1 80 Fold:Glycolipid transfer protein, GLTP Superfamily:Glycolipid transfer protein, GLTP Family:Glycolipid transfer protein, GLTP 73 c2i3fA_ not modelled 13.5 40 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:glycolipid transfer-like protein; PDBTitle: crystal structure of a glycolipid transfer-like protein2 from galdieria sulphuraria 74 d1cmia_ not modelled 13.5 13 Fold:DLC Superfamily:DLC Family:DLC 75 d1e1oa1 not modelled 13.1 20 Fold:OB-fold Superfamily:Nucleic acid-binding proteins Family:Anticodon-binding domain 76 c2lm4A_ not modelled 13.0 38 PDB header:protein binding Chain: A: PDB Molecule:succinate dehydrogenase assembly factor 2, mitochondrial; PDBTitle: solution nmr structure of mitochondrial succinate dehydrogenase2 assembly factor 2 from saccharomyces cerevisiae, northeast structural3 genomics consortium target yt682a 77 d2c42a2 not modelled 13.0 27 Fold:Thiamin diphosphate-binding fold (THDP-binding) Superfamily:Thiamin diphosphate-binding fold (THDP-binding) Family:PFOR PP module 78 c2jz8A_ not modelled 12.6 33 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:uncharacterized protein bh09830; PDBTitle: solution nmr structure of bh09830 from bartonella henselae2 modeled with one zn+2 bound. northeast structural genomics3 consortium target bnr55 79 c2vpyB_ not modelled 12.4 27 PDB header:oxidoreductase Chain: B: PDB Molecule:nrfc protein; PDBTitle: polysulfide reductase with bound quinone inhibitor,2 pentachlorophenol (pcp) 80 c3brgC_ not modelled 12.2 35 PDB header:dna binding protein/dna Chain: C: PDB Molecule:recombining binding protein suppressor of PDBTitle: csl (rbp-jk) bound to dna 81 d3cdda1 not modelled 12.2 17 Fold:Phage tail proteins Superfamily:Phage tail proteins Family:Baseplate protein-like 82 c3izbP_ not modelled 12.1 60 PDB header:ribosome Chain: P: PDB Molecule:40s ribosomal protein rps11 (s17p); PDBTitle: localization of the small subunit ribosomal proteins into a 6.1 a2 cryo-em map of saccharomyces cerevisiae translating 80s ribosome 83 c2a8cE_ not modelled 11.9 50 PDB header:lyase Chain: E: PDB Molecule:carbonic anhydrase 2; PDBTitle: haemophilus influenzae beta-carbonic anhydrase 84 c3iz6P_ not modelled 11.8 60 PDB header:ribosome Chain: P: PDB Molecule:40s ribosomal protein s11 (s17p); PDBTitle: localization of the small subunit ribosomal proteins into a 5.5 a2 cryo-em map of triticum aestivum translating 80s ribosome 85 d3e2ba1 not modelled 11.8 13 Fold:DLC Superfamily:DLC Family:DLC 86 c2fo1A_ not modelled 11.6 35 PDB header:gene regulation/signalling protein/dna Chain: A: PDB Molecule:lin-12 and glp-1 phenotype protein 1, isoform b; PDBTitle: crystal structure of the csl-notch-mastermind ternary2 complex bound to dna 87 d1bbua1 not modelled 11.4 20 Fold:OB-fold Superfamily:Nucleic acid-binding proteins Family:Anticodon-binding domain 88 d1kt0a2 not modelled 11.2 26 Fold:FKBP-like Superfamily:FKBP-like Family:FKBP immunophilin/proline isomerase 89 d1ddza1 not modelled 10.9 43 Fold:Resolvase-like Superfamily:beta-carbonic anhydrase, cab Family:beta-carbonic anhydrase, cab 90 c2yrtA_ not modelled 10.8 25 PDB header:transcription Chain: A: PDB Molecule:chord containing protein-1; PDBTitle: solution structure of the chord domain of human chord-2 containing protein 1 91 c2w3nA_ not modelled 10.8 32 PDB header:lyase Chain: A: PDB Molecule:carbonic anhydrase 2; PDBTitle: structure and inhibition of the co2-sensing carbonic2 anhydrase can2 from the pathogenic fungus cryptococcus3 neoformans 92 d1nfga1 not modelled 10.6 22 Fold:Composite domain of metallo-dependent hydrolases Superfamily:Composite domain of metallo-dependent hydrolases Family:Hydantoinase (dihydropyrimidinase) 93 d1ubdc4 not modelled 10.5 44 Fold:beta-beta-alpha zinc fingers Superfamily:beta-beta-alpha zinc fingers Family:Classic zinc finger, C2H2 94 d1vmka_ not modelled 10.4 20 Fold:Phosphorylase/hydrolase-like Superfamily:Purine and uridine phosphorylases Family:Purine and uridine phosphorylases 95 c3eyxB_ not modelled 10.2 27 PDB header:lyase Chain: B: PDB Molecule:carbonic anhydrase; PDBTitle: crystal structure of carbonic anhydrase nce103 from2 saccharomyces cerevisiae 96 d2abxa_ not modelled 10.2 42 Fold:Snake toxin-like Superfamily:Snake toxin-like Family:Snake venom toxins 97 d1d1la_ not modelled 10.2 24 Fold:lambda repressor-like DNA-binding domains Superfamily:lambda repressor-like DNA-binding domains Family:Phage repressors 98 c2ivfB_ not modelled 9.6 16 PDB header:oxidoreductase Chain: B: PDB Molecule:ethylbenzene dehydrogenase beta-subunit; PDBTitle: ethylbenzene dehydrogenase from aromatoleum aromaticum 99 c2xznQ_ not modelled 9.6 40 PDB header:ribosome Chain: Q: PDB Molecule:ribosomal protein s17 containing protein; PDBTitle: crystal structure of the eukaryotic 40s ribosomal2 subunit in complex with initiation factor 1. this file3 contains the 40s subunit and initiation factor for4 molecule 2