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  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: c2gbxE_

Fold library idPDB HeaderMoleculeTitle
c2gbxE_PDB header: oxidoreductaseChain: E: PDB Molecule: biphenyl 2,3-dioxygenase alpha subunit;PDBTitle: crystal structure of biphenyl 2,3-dioxygenase from2 sphingomonas yanoikuyae b1 bound to biphenyl


Added to library: Tue Mar 16 11:55:58 2010
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence TLVDTVNASQSRQVFWDEDVYALEIERIFSRAWLMLGHESLVPKPGDFITTYMAEDKVILSHQSDGTFRA
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Known secondary structure (DSSP)

TTTTT
TTTTS
GGGS
STTTT
TTS
 .........80.........90.........100.........110.........120.........130.........140
Sequence FINSCSHRGNQICHADSGNAKAFVCNYHGWVFGQDGSLVDVPLESRCYHNSLDKQKLAAKSVRVETYKGF
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Known secondary structure (DSSP) SS
TTT


S


S
S

TTT


TTS

TTTTTTSTT


TTT



TT
 .........150.........160.........170.........180.........190.........200.........210
Sequence IFGCHDPEAPSLEDYLGEFRYYLDTIWEGAGGGMELLGPPMKSLLQCNWKVPAENFIGDGYHVGWTHAAA
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Known secondary structure (DSSP)

SS


GGGTTTTT
SS
T

T
 .........220.........230.........240.........250.........260.........270.........280
Sequence LSQIGGELAGLAGNRADIPFDDLGLQFTTRHGHGFGVIDNAAAGLHIKREGWTKFLEDTRGEVRRKFGPE
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Known secondary structure (DSSP)
SSGGGGTT

TTS

TTS
TT
TTSS
SS
T
 .........290.........300.........310.........320.........330.........340.........350
Sequence RERLYLGHWNCSIFPNCSFLYGTNTFKIWHPRGPHEIEVWTYTIVPRDADPATKSMIQREAIRTFGTAGT
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Known secondary structure (DSSP) TSTTTTTTTSSTT
SSS
STT
T
 .........360.........370.........380.........390.........400.........410.........420
Sequence LESDDGENMSSATYINRGVITRNGRMNSTMGVGYEGPHPVYPGIVGISFIGETSYRGFYRFWKEMIDAPD
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Known secondary structure (DSSP) TGGGSTS

TTSSS
SSSSSS
SSSS
SS
 .........430.........440.........
Sequence WASVKANDDTWDSVFPNRNFWNEKLNAAE
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Known secondary structure (DSSP) TTTTSSTTSS

TT


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction
Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960
 
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Michael Sternberg  
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