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Protein Homology/analogY Recognition Engine V 2.2 |
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Fold library id | Fold | Superfamily | Family |
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d1jm1a_ | ISP domain | ISP domain | Rieske iron-sulfur protein (ISP) |
Added to library: Tue Mar 16 12:38:01 2010 | |
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Links to external resources | |
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  | 1 | . | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 |
Sequence | N | T | D | G | L | A | G | F | P | R | Y | K | V | A | N | I | Q | Q | V | Q | Q | Q | I | K | S | S | G | C | A | V | Y | F | F | A | Y | P | L | T | D | E | P | C | F | L | V | D | L | Q | A | L | T | G | Q | Q | I | T | E | I | P | N | P | Y | Y | G | K | Y | A | G | P | L |
Predicted secondary structure | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | |||||||||||||||||||||||||||||||||||||||||||||||||||
SS confidence | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Known secondary structure (DSSP) | S | S | T | T | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | S | S | T | T | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | S | S | ![]() | ![]() | ![]() | T | T | T | T | S | S | T | T | G |   | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 |
Sequence | G | Q | I | Q | T | I | K | G | V | G | P | N | G | T | I | F | A | F | S | D | V | C | V | H | L | G | C | Q | L | P | A | Q | V | I | V | S | S | E | S | D | P | G | L | Y | A | K | G | A | D | L | H | C | P | C | H | G | S | I | Y | A | L | K | D | G | G | V | V | V | S | G |
Predicted secondary structure | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ||||||||||||||||||||||||||||||||||||||||||||||||||
SS confidence | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Known secondary structure (DSSP) | G | G | ![]() | ![]() | ![]() | B | T | T | T | T | ![]() | ![]() | ![]() | ![]() | ![]() | S | B | T | T | T | B | T | T | ![]() | ![]() | ![]() | S | S | T | T | S | S | ![]() | ![]() | ![]() | T | T | T | T | ![]() | ![]() | ![]() | T | T | T | ![]() | ![]() | ![]() | G | G | G | T | S | ![]() | ![]() | ![]() | ![]() | S |   | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . |
Sequence | P | A | P | R | P | L | P | I | V | I | L | D | Y | D | S | S | T | G | D | I | Y | A | V | G | T | N | A | P | Y | F | S | A | G | I | P | R | T | T | P | Q | D | N | L | L | Y | D | P | R | Y | S | Y | S | V | P | N | N | P | S | C | S | N | G | ||||||||
Predicted secondary structure | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ||||||||||||||||||||||||||||||||||||||||||||||||||||
SS confidence | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Known secondary structure (DSSP) | S | S | B | ![]() | ![]() | ![]() | ![]() | ![]() | T | T | T | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | S | S | S | S | S | S | G | G | G | G | G | S | T | T | S | S | ![]() | ![]() |
Download: | PDB structure | FASTA sequence |
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