Email l.a.kelley@imperial.ac.uk Description P76611 Date Thu Jan 5 12:24:57 GMT 2012 Unique Job ID 3903eed1dc4e245b

Detailed template information

# Template Alignment Coverage 3D Model Confidence % i.d. Template Information

1 c3pkzK_ 99.4 17 PDB header:recombination Chain: K: PDB Molecule:recombinase sin; PDBTitle: structural basis for catalytic activation of a serine recombinase 2 c3g13B_ 99.4 14 PDB header:recombination Chain: B: PDB Molecule:putative conjugative transposon recombinase; PDBTitle: crystal structure of putative conjugative transposon recombinase from2 clostridium difficile 3 c2r0qF_ 99.4 18 PDB header:recombination/dna Chain: F: PDB Molecule:putative transposon tn552 dna-invertase bin3; PDBTitle: crystal structure of a serine recombinase- dna regulatory2 complex 4 d2rsla_ 99.2 30 Fold:Resolvase-like Superfamily:Resolvase-like Family:gamma,delta resolvase, catalytic domain 5 c2gm4B_ 99.2 29 PDB header:recombination, dna Chain: B: PDB Molecule:transposon gamma-delta resolvase; PDBTitle: an activated, tetrameric gamma-delta resolvase: hin chimaera bound to2 cleaved dna 6 c3ploX_ 99.2 46 PDB header:recombination Chain: X: PDB Molecule:dna-invertase; PDBTitle: crystal structure of the fis-independent mutant of gin 7 d1hx7a_ 99.2 29 Fold:Resolvase-like Superfamily:Resolvase-like Family:gamma,delta resolvase, catalytic domain 8 d2gm4a2 99.1 31 Fold:Resolvase-like Superfamily:Resolvase-like Family:gamma,delta resolvase, catalytic domain 9 d1gdta2 99.0 28 Fold:Resolvase-like Superfamily:Resolvase-like Family:gamma,delta resolvase, catalytic domain 10 c3lhkA_ 98.8 16 PDB header:dna binding protein Chain: A: PDB Molecule:putative dna binding protein mj0014; PDBTitle: crystal structure of putative dna binding protein from2 methanocaldococcus jannaschii. 11 c3lhfC_ 98.8 23 PDB header:recombination Chain: C: PDB Molecule:serine recombinase; PDBTitle: the crystal structure of a serine recombinase from2 sulfolobus solfataricus to 2.3a 12 c3guvA_ 98.7 21 PDB header:recombination Chain: A: PDB Molecule:site-specific recombinase, resolvase family protein; PDBTitle: crystal structure of a resolvase family site-specific recombinase from2 streptococcus pneumoniae 13 c3bvpB_ 98.7 26 PDB header:recombination Chain: B: PDB Molecule:tp901-1 integrase; PDBTitle: crystal structure of the n-terminal catalytic domain of tp901-12 integrase 14 d2obba1 85.3 18 Fold:HAD-like Superfamily:HAD-like Family:BT0820-like 15 c3trjC_ 82.2 20 PDB header:isomerase Chain: C: PDB Molecule:phosphoheptose isomerase; PDBTitle: structure of a phosphoheptose isomerase from francisella tularensis 16 c3shoA_ 78.1 22 PDB header:transcription regulator Chain: A: PDB Molecule:transcriptional regulator, rpir family; PDBTitle: crystal structure of rpir transcription factor from sphaerobacter2 thermophilus (sugar isomerase domain) 17 d2c71a1 77.1 15 Fold:7-stranded beta/alpha barrel Superfamily:Glycoside hydrolase/deacetylase Family:NodB-like polysaccharide deacetylase 18 d2cc0a1 74.9 11 Fold:7-stranded beta/alpha barrel Superfamily:Glycoside hydrolase/deacetylase Family:NodB-like polysaccharide deacetylase 19 c2x3yA_ 72.6 9 PDB header:isomerase Chain: A: PDB Molecule:phosphoheptose isomerase; PDBTitle: crystal structure of gmha from burkholderia pseudomallei 20 d1x92a_ 72.5 14 Fold:SIS domain Superfamily:SIS domain Family:mono-SIS domain 21 d2c1ia1 not modelled 70.1 16 Fold:7-stranded beta/alpha barrel Superfamily:Glycoside hydrolase/deacetylase Family:NodB-like polysaccharide deacetylase 22 d1x94a_ not modelled 69.6 15 Fold:SIS domain Superfamily:SIS domain Family:mono-SIS domain 23 c2xhzC_ not modelled 69.1 5 PDB header:isomerase Chain: C: PDB Molecule:arabinose 5-phosphate isomerase; PDBTitle: probing the active site of the sugar isomerase domain from e. coli2 arabinose-5-phosphate isomerase via x-ray crystallography 24 c2yvaB_ not modelled 67.9 22 PDB header:dna binding protein Chain: B: PDB Molecule:dnaa initiator-associating protein diaa; PDBTitle: crystal structure of escherichia coli diaa 25 d1jeoa_ not modelled 63.7 8 Fold:SIS domain Superfamily:SIS domain Family:mono-SIS domain 26 d1tk9a_ not modelled 58.8 10 Fold:SIS domain Superfamily:SIS domain Family:mono-SIS domain 27 c1w17A_ not modelled 56.1 13 PDB header:hydrolase Chain: A: PDB Molecule:probable polysaccharide deacetylase pdaa; PDBTitle: structure of bacillus subtilis pdaa, a family 42 carbohydrate esterase. 28 c3fxaA_ not modelled 55.9 10 PDB header:sugar binding protein Chain: A: PDB Molecule:sis domain protein; PDBTitle: crystal structure of a putative sugar-phosphate isomerase2 (lmof2365_0531) from listeria monocytogenes str. 4b f2365 at 1.60 a3 resolution 29 d1vima_ not modelled 55.7 12 Fold:SIS domain Superfamily:SIS domain Family:mono-SIS domain 30 d1m3sa_ not modelled 55.4 10 Fold:SIS domain Superfamily:SIS domain Family:mono-SIS domain 31 d1ny1a_ not modelled 54.9 13 Fold:7-stranded beta/alpha barrel Superfamily:Glycoside hydrolase/deacetylase Family:NodB-like polysaccharide deacetylase 32 d2p8ta2 not modelled 48.8 10 Fold:DCoH-like Superfamily:GAD domain-like Family:PH0730 C-terminal domain-like 33 c3etnD_ not modelled 47.4 15 PDB header:isomerase Chain: D: PDB Molecule:putative phosphosugar isomerase involved in capsule PDBTitle: crystal structure of putative phosphosugar isomerase involved in2 capsule formation (yp_209877.1) from bacteroides fragilis nctc 93433 at 1.70 a resolution 34 c2c1iA_ not modelled 47.2 17 PDB header:hydrolase Chain: A: PDB Molecule:peptidoglycan glcnac deacetylase; PDBTitle: structure of streptococcus pnemoniae peptidoglycan2 deacetylase (sppgda) d 275 n mutant. 35 d1j8fa_ not modelled 40.1 14 Fold:DHS-like NAD/FAD-binding domain Superfamily:DHS-like NAD/FAD-binding domain Family:Sir2 family of transcriptional regulators 36 c2vyoA_ not modelled 36.0 9 PDB header:hydrolase Chain: A: PDB Molecule:chitooligosaccharide deacetylase; PDBTitle: chitin deacetylase family member from encephalitozoon2 cuniculi 37 c3cvjB_ not modelled 35.5 16 PDB header:isomerase Chain: B: PDB Molecule:putative phosphoheptose isomerase; PDBTitle: crystal structure of a putative phosphoheptose isomerase (bh3325) from2 bacillus halodurans c-125 at 2.00 a resolution 38 c1q14A_ not modelled 35.1 17 PDB header:hydrolase Chain: A: PDB Molecule:hst2 protein; PDBTitle: structure and autoregulation of the yeast hst2 homolog of sir2 39 c2puwA_ not modelled 32.6 10 PDB header:transferase Chain: A: PDB Molecule:isomerase domain of glutamine-fructose-6-phosphate PDBTitle: the crystal structure of isomerase domain of glucosamine-6-phosphate2 synthase from candida albicans 40 d2jfga2 not modelled 30.4 16 Fold:MurD-like peptide ligases, peptide-binding domain Superfamily:MurD-like peptide ligases, peptide-binding domain Family:MurCDEF C-terminal domain 41 d2j13a1 not modelled 28.1 24 Fold:7-stranded beta/alpha barrel Superfamily:Glycoside hydrolase/deacetylase Family:NodB-like polysaccharide deacetylase 42 d2nlya1 not modelled 27.8 14 Fold:7-stranded beta/alpha barrel Superfamily:Glycoside hydrolase/deacetylase Family:Divergent polysaccharide deacetylase 43 c3pryA_ not modelled 26.9 12 PDB header:chaperone Chain: A: PDB Molecule:heat shock protein hsp 90-beta; PDBTitle: crystal structure of the middle domain of human hsp90-beta refined at2 2.3 a resolution 44 c3glsC_ not modelled 26.5 23 PDB header:hydrolase Chain: C: PDB Molecule:nad-dependent deacetylase sirtuin-3, PDBTitle: crystal structure of human sirt3 45 d1q1aa_ not modelled 24.5 17 Fold:DHS-like NAD/FAD-binding domain Superfamily:DHS-like NAD/FAD-binding domain Family:Sir2 family of transcriptional regulators 46 c2hjhB_ not modelled 22.6 17 PDB header:hydrolase Chain: B: PDB Molecule:nad-dependent histone deacetylase sir2; PDBTitle: crystal structure of the sir2 deacetylase 47 c2w3zA_ not modelled 22.1 15 PDB header:hydrolase Chain: A: PDB Molecule:putative deacetylase; PDBTitle: structure of a streptococcus mutans ce4 esterase 48 c2zj3A_ not modelled 19.3 10 PDB header:transferase Chain: A: PDB Molecule:glucosamine--fructose-6-phosphate PDBTitle: isomerase domain of human glucose:fructose-6-phosphate2 amidotransferase 49 c3pkiF_ not modelled 17.7 13 PDB header:hydrolase Chain: F: PDB Molecule:nad-dependent deacetylase sirtuin-6; PDBTitle: human sirt6 crystal structure in complex with adp ribose 50 c3k35D_ not modelled 15.3 13 PDB header:hydrolase Chain: D: PDB Molecule:nad-dependent deacetylase sirtuin-6; PDBTitle: crystal structure of human sirt6 51 c1gqqA_ not modelled 14.5 13 PDB header:cell wall biosynthesis Chain: A: PDB Molecule:udp-n-acetylmuramate-l-alanine ligase; PDBTitle: murc - crystal structure of the apo-enzyme from haemophilus2 influenzae 52 d1xdpa3 not modelled 13.9 12 Fold:Phospholipase D/nuclease Superfamily:Phospholipase D/nuclease Family:Polyphosphate kinase C-terminal domain 53 c2odkD_ not modelled 13.6 5 PDB header:structural genomics, unknown function Chain: D: PDB Molecule:hypothetical protein; PDBTitle: putative prevent-host-death protein from nitrosomonas europaea 54 c2gq0B_ not modelled 13.1 20 PDB header:chaperone, hydrolase Chain: B: PDB Molecule:chaperone protein htpg; PDBTitle: crystal structure of the middle domain of htpg, the e. coli2 hsp90 55 c3kw0D_ not modelled 12.7 13 PDB header:hydrolase Chain: D: PDB Molecule:cysteine peptidase; PDBTitle: crystal structure of cysteine peptidase (np_982244.1) from bacillus2 cereus atcc 10987 at 2.50 a resolution 56 c3ipzA_ not modelled 12.5 14 PDB header:electron transport, oxidoreductase Chain: A: PDB Molecule:monothiol glutaredoxin-s14, chloroplastic; PDBTitle: crystal structure of arabidopsis monothiol glutaredoxin atgrxcp 57 d1usua_ not modelled 12.5 12 Fold:Ribosomal protein S5 domain 2-like Superfamily:Ribosomal protein S5 domain 2-like Family:Hsp90 middle domain 58 d1x52a1 not modelled 12.3 25 Fold:Bacillus chorismate mutase-like Superfamily:L30e-like Family:ERF1/Dom34 C-terminal domain-like 59 d1ofla_ not modelled 11.7 17 Fold:Single-stranded right-handed beta-helix Superfamily:Pectin lyase-like Family:Chondroitinase B 60 c3efhB_ not modelled 11.5 8 PDB header:transferase Chain: B: PDB Molecule:ribose-phosphate pyrophosphokinase 1; PDBTitle: crystal structure of human phosphoribosyl pyrophosphate2 synthetase 1 61 d1p3da2 not modelled 11.5 14 Fold:MurD-like peptide ligases, peptide-binding domain Superfamily:MurD-like peptide ligases, peptide-binding domain Family:MurCDEF C-terminal domain 62 c3e7nB_ not modelled 11.4 20 PDB header:transport protein Chain: B: PDB Molecule:d-ribose high-affinity transport system; PDBTitle: crystal structure of d-ribose high-affinity transport system from2 salmonella typhimurium lt2 63 c2a3nA_ not modelled 11.4 12 PDB header:sugar binding protein Chain: A: PDB Molecule:putative glucosamine-fructose-6-phosphate aminotransferase; PDBTitle: crystal structure of a putative glucosamine-fructose-6-phosphate2 aminotransferase (stm4540.s) from salmonella typhimurium lt2 at 1.353 a resolution 64 c1hk7A_ not modelled 11.3 12 PDB header:chaperone Chain: A: PDB Molecule:heat shock protein hsp82; PDBTitle: middle domain of hsp90 65 c3mvnA_ not modelled 10.9 6 PDB header:ligase Chain: A: PDB Molecule:udp-n-acetylmuramate:l-alanyl-gamma-d-glutamayl-medo- PDBTitle: crystal structure of a domain from a putative udp-n-acetylmuramate:l-2 alanyl-gamma-d-glutamayl-medo-diaminopimelate ligase from haemophilus3 ducreyi 35000hp 66 c2o1wB_ not modelled 10.7 14 PDB header:chaperone Chain: B: PDB Molecule:endoplasmin; PDBTitle: structure of n-terminal plus middle domains (n+m) of grp94 67 c1dbgA_ not modelled 10.4 17 PDB header:lyase Chain: A: PDB Molecule:chondroitinase b; PDBTitle: crystal structure of chondroitinase b 68 d1x9aa_ not modelled 10.1 14 Fold:DsrEFH-like Superfamily:DsrEFH-like Family:DsrH-like 69 c2p5dA_ not modelled 10.0 21 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:upf0310 protein mjecl36; PDBTitle: crystal structure of mjecl36 from methanocaldococcus2 jannaschii dsm 2661 70 d1ps9a1 not modelled 9.7 16 Fold:TIM beta/alpha-barrel Superfamily:FMN-linked oxidoreductases Family:FMN-linked oxidoreductases 71 d1ogda_ not modelled 9.6 15 Fold:RbsD-like Superfamily:RbsD-like Family:RbsD-like 72 c3p13B_ not modelled 9.6 15 PDB header:isomerase Chain: B: PDB Molecule:d-ribose pyranase; PDBTitle: complex structure of d-ribose pyranase sa240 with d-ribose 73 c2o14A_ not modelled 9.5 6 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:hypothetical protein yxim; PDBTitle: x-ray crystal structure of protein yxim_bacsu from bacillus2 subtilis. northeast structural genomics consortium target3 sr595 74 d1e8ca2 not modelled 9.3 17 Fold:MurD-like peptide ligases, peptide-binding domain Superfamily:MurD-like peptide ligases, peptide-binding domain Family:MurCDEF C-terminal domain 75 c3hs2H_ not modelled 8.9 19 PDB header:antitoxin Chain: H: PDB Molecule:prevent host death protein; PDBTitle: crystal structure of phd truncated to residue 57 in an orthorhombic2 space group 76 d1x9ia_ not modelled 8.7 15 Fold:SIS domain Superfamily:SIS domain Family:double-SIS domain 77 c1dkrB_ not modelled 8.7 10 PDB header:transferase Chain: B: PDB Molecule:phosphoribosyl pyrophosphate synthetase; PDBTitle: crystal structures of bacillus subtilis phosphoribosylpyrophosphate2 synthetase: molecular basis of allosteric inhibition and activation. 78 c3hryA_ not modelled 8.6 19 PDB header:antitoxin Chain: A: PDB Molecule:prevent host death protein; PDBTitle: crystal structure of phd in a trigonal space group and partially2 disordered 79 d2iw0a1 not modelled 8.4 11 Fold:7-stranded beta/alpha barrel Superfamily:Glycoside hydrolase/deacetylase Family:NodB-like polysaccharide deacetylase 80 d2odka1 not modelled 8.0 5 Fold:YefM-like Superfamily:YefM-like Family:YefM-like 81 d1q45a_ not modelled 7.9 23 Fold:TIM beta/alpha-barrel Superfamily:FMN-linked oxidoreductases Family:FMN-linked oxidoreductases 82 d2gbsa1 not modelled 7.9 14 Fold:PUA domain-like Superfamily:PUA domain-like Family:Atu2648/PH1033-like 83 c2wztA_ not modelled 7.8 9 PDB header:oxidoreductase Chain: A: PDB Molecule:aldo-keto reductase; PDBTitle: crystal structure of a mycobacterium aldo-keto reductase in2 its apo and liganded form 84 d2hd9a1 not modelled 7.6 18 Fold:PUA domain-like Superfamily:PUA domain-like Family:Atu2648/PH1033-like 85 d1vjia_ not modelled 7.6 19 Fold:TIM beta/alpha-barrel Superfamily:FMN-linked oxidoreductases Family:FMN-linked oxidoreductases 86 d2ob5a1 not modelled 7.4 15 Fold:RbsD-like Superfamily:RbsD-like Family:RbsD-like 87 d1zcea1 not modelled 7.1 14 Fold:PUA domain-like Superfamily:PUA domain-like Family:Atu2648/PH1033-like 88 d1hw6a_ not modelled 7.1 14 Fold:TIM beta/alpha-barrel Superfamily:NAD(P)-linked oxidoreductase Family:Aldo-keto reductases (NADP) 89 c1xkmC_ not modelled 7.0 24 PDB header:antibiotic Chain: C: PDB Molecule:distinctin chain a; PDBTitle: nmr structure of antimicrobial peptide distinctin in water 90 c1pgjA_ not modelled 7.0 15 PDB header:oxidoreductase Chain: A: PDB Molecule:6-phosphogluconate dehydrogenase; PDBTitle: x-ray structure of 6-phosphogluconate dehydrogenase from the protozoan2 parasite t. brucei 91 c1y6zA_ not modelled 6.9 10 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:heat shock protein, putative; PDBTitle: middle domain of plasmodium falciparum putative heat shock protein2 pf14_0417 92 c3hn7A_ not modelled 6.9 13 PDB header:ligase Chain: A: PDB Molecule:udp-n-acetylmuramate-l-alanine ligase; PDBTitle: crystal structure of a murein peptide ligase mpl (psyc_0032) from2 psychrobacter arcticus 273-4 at 1.65 a resolution 93 c3mvkA_ not modelled 6.9 20 PDB header:isomerase Chain: A: PDB Molecule:protein fucu; PDBTitle: the crystal structure of fucu from bifidobacterium longum to 1.65a 94 c3iz6V_ not modelled 6.8 20 PDB header:ribosome Chain: V: PDB Molecule:40s ribosomal protein s25 (s25e); PDBTitle: localization of the small subunit ribosomal proteins into a 5.5 a2 cryo-em map of triticum aestivum translating 80s ribosome 95 c2o8rA_ not modelled 6.7 19 PDB header:transferase Chain: A: PDB Molecule:polyphosphate kinase; PDBTitle: crystal structure of polyphosphate kinase from2 porphyromonas gingivalis 96 c1xkmA_ not modelled 6.5 29 PDB header:antibiotic Chain: A: PDB Molecule:distinctin chain a; PDBTitle: nmr structure of antimicrobial peptide distinctin in water 97 d1a6fa_ not modelled 6.5 7 Fold:Ribosomal protein S5 domain 2-like Superfamily:Ribosomal protein S5 domain 2-like Family:RNase P protein 98 c3hjcA_ not modelled 6.3 18 PDB header:chaperone Chain: A: PDB Molecule:heat shock protein 83-1; PDBTitle: crystal structure of the carboxy-terminal domain of hsp90 from2 leishmania major, lmjf33.0312 99 c2iw0A_ not modelled 6.3 11 PDB header:hydrolase Chain: A: PDB Molecule:chitin deacetylase; PDBTitle: structure of the chitin deacetylase from the fungal2 pathogen colletotrichum lindemuthianum