Email l.a.kelley@imperial.ac.uk Description P0A905 Date Thu Jan 5 11:09:05 GMT 2012 Unique Job ID 3821f79bf5dbc253

Detailed template information

# Template Alignment Coverage 3D Model Confidence % i.d. Template Information

1 c2rcnA_ 59.2 18 PDB header:hydrolase Chain: A: PDB Molecule:probable gtpase engc; PDBTitle: crystal structure of the ribosomal interacting gtpase yjeq from the2 enterobacterial species salmonella typhimurium. 2 d2awna1 50.2 7 Fold:OB-fold Superfamily:MOP-like Family:ABC-transporter additional domain 3 c2lbgA_ 47.8 55 PDB header:membrane protein Chain: A: PDB Molecule:major prion protein; PDBTitle: structure of the chr of the prion protein in dpc micelles 4 d1oxxk1 46.4 13 Fold:OB-fold Superfamily:MOP-like Family:ABC-transporter additional domain 5 c2k14A_ 44.3 24 PDB header:unknown function Chain: A: PDB Molecule:yuaf protein; PDBTitle: solution structure of the soluble domain of the nfed2 protein yuaf from bacillus subtilis 6 d2gnra1 43.1 19 Fold:OB-fold Superfamily:Nucleic acid-binding proteins Family:SSO2064-like 7 c3qz9D_ 40.9 29 PDB header:lyase Chain: D: PDB Molecule:co-type nitrile hydratase beta subunit; PDBTitle: crystal structure of co-type nitrile hydratase beta-y215f from2 pseudomonas putida. 8 c2dxcG_ 40.8 36 PDB header:hydrolase Chain: G: PDB Molecule:thiocyanate hydrolase subunit alpha; PDBTitle: recombinant thiocyanate hydrolase, fully-matured form 9 d1ugpb_ 39.9 21 Fold:SH3-like barrel Superfamily:Electron transport accessory proteins Family:Nitrile hydratase beta chain 10 c2jvvA_ 38.8 29 PDB header:transcription Chain: A: PDB Molecule:transcription antitermination protein nusg; PDBTitle: solution structure of e. coli nusg carboxyterminal domain 11 c2kvqG_ 38.8 29 PDB header:transcription Chain: G: PDB Molecule:transcription antitermination protein nusg; PDBTitle: solution structure of nuse:nusg-ctd complex 12 d1v29b_ 38.7 29 Fold:SH3-like barrel Superfamily:Electron transport accessory proteins Family:Nitrile hydratase beta chain 13 d1q1ca1 38.6 22 Fold:FKBP-like Superfamily:FKBP-like Family:FKBP immunophilin/proline isomerase 14 c2e6zA_ 36.6 33 PDB header:transcription Chain: A: PDB Molecule:transcription elongation factor spt5; PDBTitle: solution structure of the second kow motif of human2 transcription elongation factor spt5 15 c1h9mB_ 33.5 20 PDB header:binding protein Chain: B: PDB Molecule:molybdenum-binding-protein; PDBTitle: two crystal structures of the cytoplasmic molybdate-binding2 protein modg suggest a novel cooperative binding mechanism3 and provide insights into ligand-binding specificity.4 peg-grown form with molybdate bound 16 d1nppa2 31.6 21 Fold:SH3-like barrel Superfamily:Translation proteins SH3-like domain Family:N-utilization substance G protein NusG, C-terminal domain 17 d1nz9a_ 30.1 31 Fold:SH3-like barrel Superfamily:Translation proteins SH3-like domain Family:N-utilization substance G protein NusG, C-terminal domain 18 d2qdyb1 25.6 55 Fold:SH3-like barrel Superfamily:Electron transport accessory proteins Family:Nitrile hydratase beta chain 19 d2do3a1 25.4 25 Fold:SH3-like barrel Superfamily:Translation proteins SH3-like domain Family:SPT5 KOW domain-like 20 c1h9sA_ 24.0 24 PDB header:transcription regulator Chain: A: PDB Molecule:molybdenum transport protein mode; PDBTitle: molybdate bound complex of dimop domain of mode from e.coli 21 d1h9ma1 not modelled 23.8 19 Fold:OB-fold Superfamily:MOP-like Family:BiMOP, duplicated molybdate-binding domain 22 d2zgwa1 not modelled 20.4 43 Fold:SH3-like barrel Superfamily:C-terminal domain of transcriptional repressors Family:Biotin repressor (BirA) 23 d2zjrm1 not modelled 19.9 23 Fold:SH3-like barrel Superfamily:Translation proteins SH3-like domain Family:Ribosomal protein L19 24 d2vv5a1 not modelled 18.8 25 Fold:Sm-like fold Superfamily:Sm-like ribonucleoproteins Family:Mechanosensitive channel protein MscS (YggB), middle domain 25 c3cp0A_ not modelled 18.8 15 PDB header:membrane protein Chain: A: PDB Molecule:membrane protein implicated in regulation of membrane PDBTitle: crystal structure of the soluble domain of membrane protein implicated2 in regulation of membrane protease activity from corynebacterium3 glutamicum 26 d1guta_ not modelled 18.6 15 Fold:OB-fold Superfamily:MOP-like Family:Molybdate/tungstate binding protein MOP 27 c2yv5A_ not modelled 18.0 19 PDB header:hydrolase Chain: A: PDB Molecule:yjeq protein; PDBTitle: crystal structure of yjeq from aquifex aeolicus 28 d1u0la1 not modelled 17.9 19 Fold:OB-fold Superfamily:Nucleic acid-binding proteins Family:Cold shock DNA-binding domain-like 29 d1h9ra1 not modelled 17.4 12 Fold:OB-fold Superfamily:MOP-like Family:BiMOP, duplicated molybdate-binding domain 30 d2jnaa1 not modelled 16.5 20 Fold:Dodecin subunit-like Superfamily:YdgH-like Family:YdgH-like 31 c3zvkG_ not modelled 15.8 21 PDB header:antitoxin/toxin/dna Chain: G: PDB Molecule:antitoxin of toxin-antitoxin system vapb; PDBTitle: crystal structure of vapbc2 from rickettsia felis bound to2 a dna fragment from their promoter 32 c3gd7C_ not modelled 15.6 7 PDB header:hydrolase Chain: C: PDB Molecule:fusion complex of cystic fibrosis transmembrane PDBTitle: crystal structure of human nbd2 complexed with n6-2 phenylethyl-atp (p-atp) 33 d1fr3a_ not modelled 15.4 10 Fold:OB-fold Superfamily:MOP-like Family:Molybdate/tungstate binding protein MOP 34 c1rouA_ not modelled 15.3 24 PDB header:rotamase (isomerase) Chain: A: PDB Molecule:fkbp59-i; PDBTitle: structure of fkbp59-i, the n-terminal domain of a 59 kda2 fk506-binding protein, nmr, 22 structures 35 d1h9ma2 not modelled 15.3 20 Fold:OB-fold Superfamily:MOP-like Family:BiMOP, duplicated molybdate-binding domain 36 c2k8iA_ not modelled 14.9 14 PDB header:isomerase Chain: A: PDB Molecule:peptidyl-prolyl cis-trans isomerase; PDBTitle: solution structure of e.coli slyd 37 c2fhdA_ not modelled 14.5 17 PDB header:cell cycle Chain: A: PDB Molecule:dna repair protein rhp9/crb2; PDBTitle: crystal structure of crb2 tandem tudor domains 38 d1ah9a_ not modelled 14.2 14 Fold:OB-fold Superfamily:Nucleic acid-binding proteins Family:Cold shock DNA-binding domain-like 39 c3hfwA_ not modelled 13.6 40 PDB header:hydrolase Chain: A: PDB Molecule:protein adp-ribosylarginine hydrolase; PDBTitle: crystal structure of human adp-ribosylhydrolase 1 (harh1) 40 d1h9ra2 not modelled 13.5 24 Fold:OB-fold Superfamily:MOP-like Family:BiMOP, duplicated molybdate-binding domain 41 c2kfwA_ not modelled 12.6 14 PDB header:isomerase Chain: A: PDB Molecule:fkbp-type peptidyl-prolyl cis-trans isomerase PDBTitle: solution structure of full-length slyd from e.coli 42 c3i4oA_ not modelled 12.6 21 PDB header:translation Chain: A: PDB Molecule:translation initiation factor if-1; PDBTitle: crystal structure of translation initiation factor 1 from2 mycobacterium tuberculosis 43 c4a2iV_ not modelled 11.5 16 PDB header:ribosome/hydrolase Chain: V: PDB Molecule:putative ribosome biogenesis gtpase rsga; PDBTitle: cryo-electron microscopy structure of the 30s subunit in complex with2 the yjeq biogenesis factor 44 d1pkla3 not modelled 11.3 15 Fold:Pyruvate kinase C-terminal domain-like Superfamily:PK C-terminal domain-like Family:Pyruvate kinase, C-terminal domain 45 d1fdra1 not modelled 11.2 11 Fold:Reductase/isomerase/elongation factor common domain Superfamily:Riboflavin synthase domain-like Family:Ferredoxin reductase FAD-binding domain-like 46 d1hh2p1 not modelled 11.0 15 Fold:OB-fold Superfamily:Nucleic acid-binding proteins Family:Cold shock DNA-binding domain-like 47 d2cowa1 not modelled 11.0 13 Fold:SH3-like barrel Superfamily:Cap-Gly domain Family:Cap-Gly domain 48 d1v6ga2 not modelled 9.8 42 Fold:Glucocorticoid receptor-like (DNA-binding domain) Superfamily:Glucocorticoid receptor-like (DNA-binding domain) Family:LIM domain 49 c3zv0D_ not modelled 9.2 11 PDB header:cell cycle Chain: D: PDB Molecule:h/aca ribonucleoprotein complex subunit 4; PDBTitle: structure of the shq1p-cbf5p complex 50 c3jt0B_ not modelled 8.8 29 PDB header:structural protein Chain: B: PDB Molecule:lamin-b1; PDBTitle: crystal structure of the c-terminal fragment (426-558)2 lamin-b1 from homo sapiens, northeast structural genomics3 consortium target hr5546a 51 d2asba1 not modelled 8.7 14 Fold:OB-fold Superfamily:Nucleic acid-binding proteins Family:Cold shock DNA-binding domain-like 52 c2qtyB_ not modelled 8.6 50 PDB header:hydrolase Chain: B: PDB Molecule:poly(adp-ribose) glycohydrolase arh3; PDBTitle: crystal structure of mouse adp-ribosylhydrolase 3 (marh3) 53 d1v43a2 not modelled 8.4 21 Fold:OB-fold Superfamily:MOP-like Family:ABC-transporter additional domain 54 d1t5ja_ not modelled 8.3 50 Fold:ADP-ribosylglycohydrolase Superfamily:ADP-ribosylglycohydrolase Family:ADP-ribosylglycohydrolase 55 d1uufa1 not modelled 8.1 26 Fold:GroES-like Superfamily:GroES-like Family:Alcohol dehydrogenase-like, N-terminal domain 56 d1whha_ not modelled 7.7 19 Fold:SH3-like barrel Superfamily:Cap-Gly domain Family:Cap-Gly domain 57 c2e12B_ not modelled 7.2 17 PDB header:translation Chain: B: PDB Molecule:hypothetical protein xcc3642; PDBTitle: the crystal structure of xc5848 from xanthomonas campestris2 adopting a novel variant of sm-like motif 58 d1e2wa2 not modelled 7.1 23 Fold:Barrel-sandwich hybrid Superfamily:Rudiment single hybrid motif Family:Cytochrome f, small domain 59 d3d31a1 not modelled 6.9 24 Fold:OB-fold Superfamily:MOP-like Family:ABC-transporter additional domain 60 c1zeqX_ not modelled 6.8 14 PDB header:metal binding protein Chain: X: PDB Molecule:cation efflux system protein cusf; PDBTitle: 1.5 a structure of apo-cusf residues 6-88 from escherichia2 coli 61 c2wocA_ not modelled 6.7 35 PDB header:hydrolase Chain: A: PDB Molecule:adp-ribosyl-[dinitrogen reductase] glycohydrolase; PDBTitle: crystal structure of the dinitrogenase reductase-activating2 glycohydrolase (drag) from rhodospirillum rubrum 62 c2yzwA_ not modelled 6.6 30 PDB header:hydrolase Chain: A: PDB Molecule:adp-ribosylglycohydrolase; PDBTitle: adp-ribosylglycohydrolase-related protein complex 63 c1m1gB_ not modelled 6.6 18 PDB header:transcription Chain: B: PDB Molecule:transcription antitermination protein nusg; PDBTitle: crystal structure of aquifex aeolicus n-utilization2 substance g (nusg), space group p2(1) 64 c3k6oA_ not modelled 6.6 22 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:uncharacterized protein duf1344; PDBTitle: crystal structure of protein of unknown function duf13442 (yp_001299214.1) from bacteroides vulgatus atcc 8482 at 2.00 a3 resolution 65 d2gycn1 not modelled 6.6 27 Fold:SH3-like barrel Superfamily:Translation proteins SH3-like domain Family:Ribosomal protein L19 66 d2q07a1 not modelled 6.5 20 Fold:PUA domain-like Superfamily:PUA domain-like Family:PUA domain 67 c1u0lB_ not modelled 6.4 17 PDB header:hydrolase Chain: B: PDB Molecule:probable gtpase engc; PDBTitle: crystal structure of yjeq from thermotoga maritima 68 d2qqsa2 not modelled 6.4 23 Fold:SH3-like barrel Superfamily:Tudor/PWWP/MBT Family:Tudor domain 69 d1whka_ not modelled 6.1 27 Fold:SH3-like barrel Superfamily:Cap-Gly domain Family:Cap-Gly domain 70 c1vciA_ not modelled 6.0 18 PDB header:transport protein Chain: A: PDB Molecule:sugar-binding transport atp-binding protein; PDBTitle: crystal structure of the atp-binding cassette of multisugar2 transporter from pyrococcus horikoshii ot3 complexed with3 atp 71 d2coya1 not modelled 5.9 20 Fold:SH3-like barrel Superfamily:Cap-Gly domain Family:Cap-Gly domain 72 c2vv5D_ not modelled 5.9 25 PDB header:membrane protein Chain: D: PDB Molecule:small-conductance mechanosensitive channel; PDBTitle: the open structure of mscs 73 d1iq8a3 not modelled 5.8 11 Fold:PUA domain-like Superfamily:PUA domain-like Family:PUA domain 74 c3g9dB_ not modelled 5.7 35 PDB header:hydrolase Chain: B: PDB Molecule:dinitrogenase reductase activacting PDBTitle: crystal structure glycohydrolase 75 d1i4ma_ not modelled 5.6 33 Fold:Prion-like Superfamily:Prion-like Family:Prion-like 76 c2kr7A_ not modelled 5.6 14 PDB header:isomerase Chain: A: PDB Molecule:fkbp-type peptidyl-prolyl cis-trans isomerase slyd; PDBTitle: solution structure of helicobacter pylori slyd 77 d2ccwa1 not modelled 5.4 10 Fold:Cupredoxin-like Superfamily:Cupredoxins Family:Plastocyanin/azurin-like 78 c2k5hA_ not modelled 5.3 26 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:conserved protein; PDBTitle: solution nmr structure of protein encoded by mth693 from2 methanobacterium thermoautotrophicum: northeast structural3 genomics consortium target tt824a 79 d1r9ha_ not modelled 5.3 17 Fold:FKBP-like Superfamily:FKBP-like Family:FKBP immunophilin/proline isomerase 80 d1tova_ not modelled 5.3 11 Fold:SH3-like barrel Superfamily:Cap-Gly domain Family:Cap-Gly domain 81 d1g2914 not modelled 5.3 24 Fold:OB-fold Superfamily:MOP-like Family:ABC-transporter additional domain 82 c3k8rA_ not modelled 5.3 14 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:uncharacterized protein; PDBTitle: crystal structure of protein of unknown function (yp_427503.1) from2 rhodospirillum rubrum atcc 11170 at 2.75 a resolution 83 d1ex4a1 not modelled 5.2 33 Fold:SH3-like barrel Superfamily:DNA-binding domain of retroviral integrase Family:DNA-binding domain of retroviral integrase