Secondary structure and disorder prediction

		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60
Sequence		M	S	L	S	R	R	Q	F	I	Q	A	S	G	I	A	L	C	A	G	A	V	P	L	K	A	S	A	A	G	Q	Q	Q	P	L	P	V	P	P	L	L	E	S	R	R	G	Q	P	L	F	M	T	V	Q	R	A	H	W	S	F	T
Secondary structure
SS confidence
Disorder		?	?	?	?																?	?	?	?	?	?	?	?	?	?	?	?	?	?					?		?	?
Disorder confidence
		.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120
Sequence		P	G	T	R	A	S	V	W	G	I	N	G	R	Y	L	G	P	T	I	R	V	W	K	G	D	D	V	K	L	I	Y	S	N	R	L	T	E	N	V	S	M	T	V	A	G	L	Q	V	P	G	P	L	M	G	G	P	A	R	M	M
Secondary structure
SS confidence
Disorder
Disorder confidence
		.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180
Sequence		S	P	N	A	D	W	A	P	V	L	P	I	R	Q	N	A	A	T	L	W	Y	H	A	N	T	P	N	R	T	A	Q	Q	V	Y	N	G	L	A	G	M	W	L	V	E	D	E	V	S	K	S	L	P	I	P	N	H	Y	G	V	D
Secondary structure
SS confidence
Disorder																															?																			?	?
Disorder confidence
		.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
Sequence		D	F	P	V	I	I	Q	D	K	R	L	D	N	F	G	T	P	E	Y	N	E	P	G	S	G	G	F	V	G	D	T	L	L	V	N	G	V	Q	S	P	Y	V	E	V	S	R	G	W	V	R	L	R	L	L	N	A	S	N	S	R
Secondary structure
SS confidence
Disorder																?	?	?					?	?	?	?
Disorder confidence
		.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300
Sequence		R	Y	Q	L	Q	M	N	D	G	R	P	L	H	V	I	S	G	D	Q	G	F	L	P	A	P	V	S	V	K	Q	L	S	L	A	P	G	E	R	R	E	I	L	V	D	M	S	N	G	D	E	V	S	I	T	C	G	E	A	A	S
Secondary structure
SS confidence
Disorder																														?																													?	?	?
Disorder confidence
		.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360
Sequence		I	V	D	R	I	R	G	F	F	E	P	S	S	I	L	V	S	T	L	V	L	T	L	R	P	T	G	L	L	P	L	V	T	D	S	L	P	M	R	L	L	P	T	E	I	M	A	G	S	P	I	R	S	R	D	I	S	L	G	D
Secondary structure
SS confidence
Disorder		?	?	?	?		?	?	?	?	?	?	?		?	?	?	?		?	?	?	?		?		?		?		?	?	?	?		?	?	?	?		?	?	?	?	?	?	?	?	?												?
Disorder confidence
		.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence		D	P	G	I	N	G	Q	L	W	D	V	N	R	I	D	V	T	A	Q	Q	G	T	W	E	R	W	T	V	R	A	D	E	P	Q	A	F	H	I	E	G	V	M	F	Q	I	R	N	V	N	G	A	M	P	F	P	E	D	R	G	W
Secondary structure
SS confidence
Disorder				?	?																																														?	?		?
Disorder confidence
		.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470
Sequence		K	D	T	V	W	V	D	G	Q	V	E	L	L	V	Y	F	G	Q	P	S	W	A	H	F	P	F	Y	F	N	S	Q	T	L	E	M	A	D	R	G	S	I	G	Q	L	L	V	N	P	V	P
Secondary structure
SS confidence
Disorder																																																?	?	?	?
Disorder confidence

Confidence Key
High(9)											Low (0)

?	Disordered
	Alpha helix
	Beta strand

Domain analysis

Hover over an aligned region to see model and summary info

Please note, only up to the top 20 hits are modelled to reduce computer load

Rank Aligned region

PDB 2uxt chain A Region: 30 - 470 Aligned: 421 Modelled: 421 Confidence: 100.0% Identity: 96% PDB header:oxidoreductase Chain: A: PDB Molecule:protein sufi; PDBTitle: sufi protein from escherichia coli Phyre2 PDB 2fqe chain A Region: 31 - 466 Aligned: 430 Modelled: 436 Confidence: 100.0% Identity: 34% PDB header:oxidoreductase Chain: A: PDB Molecule:blue copper oxidase cueo; PDBTitle: crystal structures of e. coli laccase cueo under different2 copper binding situations Phyre2 PDB 3abg chain A Region: 26 - 470 Aligned: 442 Modelled: 445 Confidence: 100.0% Identity: 24% PDB header:oxidoreductase Chain: A: PDB Molecule:bilirubin oxidase; PDBTitle: x-ray crystal analysis of bilirubin oxidase from myrothecium2 verrucaria at 2.3 angstrom resolution using a twin crystal Phyre2 PDB 2yxw chain B Region: 31 - 466 Aligned: 431 Modelled: 436 Confidence: 100.0% Identity: 33% PDB header:oxidoreductase Chain: B: PDB Molecule:blue copper oxidase cueo; PDBTitle: the deletion mutant of multicopper oxidase cueo Phyre2 PDB 3zx1 chain A Region: 23 - 468 Aligned: 436 Modelled: 446 Confidence: 100.0% Identity: 23% PDB header:oxidoreductase Chain: A: PDB Molecule:oxidoreductase, putative; PDBTitle: multicopper oxidase from campylobacter jejuni: a metallo-oxidase Phyre2 PDB 1of0 chain A Region: 26 - 468 Aligned: 436 Modelled: 441 Confidence: 100.0% Identity: 25% PDB header:oxidoreductase Chain: A: PDB Molecule:spore coat protein a; PDBTitle: crystal structure of bacillus subtilis cota after 1h2 soaking with ebs Phyre2 PDB 2g23 chain G Region: 23 - 468 Aligned: 441 Modelled: 443 Confidence: 100.0% Identity: 30% PDB header:oxidoreductase Chain: G: PDB Molecule:phenoxazinone synthase; PDBTitle: the crystal structure of hexameric phenoxazinone synthase Phyre2 PDB 2xu9 chain A Region: 31 - 466 Aligned: 426 Modelled: 436 Confidence: 100.0% Identity: 27% PDB header:oxidoreductase Chain: A: PDB Molecule:laccase; PDBTitle: crystal structure of laccase from thermus thermophilus hb27 Phyre2 PDB 1zpu chain E Region: 44 - 468 Aligned: 411 Modelled: 421 Confidence: 100.0% Identity: 19% PDB header:oxidoreductase Chain: E: PDB Molecule:iron transport multicopper oxidase fet3; PDBTitle: crystal structure of fet3p, a multicopper oxidase that functions in2 iron import Phyre2 PDB 2q9o chain A Region: 46 - 468 Aligned: 408 Modelled: 423 Confidence: 100.0% Identity: 22% PDB header:oxidoreductase Chain: A: PDB Molecule:laccase-1; PDBTitle: near-atomic resolution structure of a melanocarpus albomyces laccase Phyre2 PDB 1gyc chain A Region: 45 - 468 Aligned: 414 Modelled: 424 Confidence: 100.0% Identity: 18% PDB header:oxidoreductase Chain: A: PDB Molecule:laccase 2; PDBTitle: crystal structure determination at room temperature of a2 laccase from trametes versicolor in its oxidised form3 containing a full complement of copper ions Phyre2 PDB 3pps chain D Region: 46 - 468 Aligned: 408 Modelled: 422 Confidence: 100.0% Identity: 21% PDB header:oxidoreductase Chain: D: PDB Molecule:laccase; PDBTitle: crystal structure of an ascomycete fungal laccase from thielavia2 arenaria Phyre2 PDB 1v10 chain A Region: 44 - 468 Aligned: 416 Modelled: 421 Confidence: 100.0% Identity: 18% PDB header:oxidase Chain: A: PDB Molecule:laccase; PDBTitle: structure of rigidoporus lignosus laccase from hemihedrally2 twinned crystals Phyre2 PDB 3aw5 chain A Region: 63 - 467 Aligned: 401 Modelled: 405 Confidence: 100.0% Identity: 27% PDB header:oxidoreductase Chain: A: PDB Molecule:multicopper oxidase; PDBTitle: structure of a multicopper oxidase from the hyperthermophilic archaeon2 pyrobaculum aerophilum Phyre2 PDB 1a65 chain A Region: 48 - 470 Aligned: 412 Modelled: 412 Confidence: 100.0% Identity: 19% PDB header:oxidoreductase Chain: A: PDB Molecule:laccase; PDBTitle: type-2 cu-depleted laccase from coprinus cinereus Phyre2 PDB 1asq chain B Region: 43 - 468 Aligned: 413 Modelled: 413 Confidence: 100.0% Identity: 19% PDB header:oxidoreductase Chain: B: PDB Molecule:ascorbate oxidase; PDBTitle: x-ray structures and mechanistic implications of three functional2 derivatives of ascorbate oxidase from zucchini: reduced-, peroxide-,3 and azide-forms Phyre2 PDB 3cdz chain A Region: 71 - 469 Aligned: 374 Modelled: 396 Confidence: 100.0% Identity: 18% PDB header:blood clotting Chain: A: PDB Molecule:coagulation factor viii heavy chain; PDBTitle: crystal structure of human factor viii Phyre2 PDB 1kcw chain A Region: 74 - 466 Aligned: 370 Modelled: 393 Confidence: 100.0% Identity: 16% PDB header:oxidoreductase Chain: A: PDB Molecule:ceruloplasmin; PDBTitle: x-ray crystal structure of human ceruloplasmin at 3.0 angstroms Phyre2 PDB 3g5w chain C Region: 46 - 332 Aligned: 278 Modelled: 287 Confidence: 100.0% Identity: 19% PDB header:metal binding protein Chain: C: PDB Molecule:multicopper oxidase type 1; PDBTitle: crystal structure of blue copper oxidase from nitrosomonas europaea Phyre2 PDB 2zwn chain A Region: 46 - 335 Aligned: 281 Modelled: 290 Confidence: 100.0% Identity: 20% PDB header:oxidoreductase Chain: A: PDB Molecule:two-domain type laccase; PDBTitle: crystal structure of the novel two-domain type laccase from a2 metagenome Phyre2 PDB 2pq4 chain B Region: 1 - 29 Aligned: 29 Modelled: 29 Confidence: 92.5% Identity: 38% PDB header:chaperone/oxidoreductase Chain: B: PDB Molecule:periplasmic nitrate reductase precursor; PDBTitle: nmr solution structure of napd in complex with napa1-352 signal peptide Phyre2 1 c2uxtA_ 2 c2fqeA_ 3 c3abgA_ 4 c2yxwB_ 5 c3zx1A_ 6 c1of0A_ 7 c2g23G_ 8 c2xu9A_ 9 c1zpuE_ 10 c2q9oA_ 11 c1gycA_ 12 c3ppsD_ 13 c1v10A_ 14 c3aw5A_ 15 c1a65A_ 16 c1asqB_ 17 c3cdzA_ 18 c1kcwA_ 19 c3g5wC_ 20 c2zwnA_ 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76 77 78 79 80 81 82 83 84 85 86 87 88 89 90 91 92 93 94 95 96 97 98 99 100 101 102 103 104 105 106 107 108 109 110 111 112 113 114 115 116 117 118 119 120 121 122 123 124 c2pq4B_ 125 126 127 128 129 130 131 132 133 134 135 136 137 138 139 140 141 142 143 144 145 146 147 148 149 150 151 152 153 154 155 156 157 158 159 160 161 162 163 164 165 166 167 168 169 170 171 172

Detailed template information

# Template Alignment Coverage 3D Model Confidence % i.d. Template Information

1 c2uxtA_ 100.0 96 PDB header:oxidoreductase Chain: A: PDB Molecule:protein sufi; PDBTitle: sufi protein from escherichia coli 2 c2fqeA_ 100.0 34 PDB header:oxidoreductase Chain: A: PDB Molecule:blue copper oxidase cueo; PDBTitle: crystal structures of e. coli laccase cueo under different2 copper binding situations 3 c3abgA_ 100.0 24 PDB header:oxidoreductase Chain: A: PDB Molecule:bilirubin oxidase; PDBTitle: x-ray crystal analysis of bilirubin oxidase from myrothecium2 verrucaria at 2.3 angstrom resolution using a twin crystal 4 c2yxwB_ 100.0 33 PDB header:oxidoreductase Chain: B: PDB Molecule:blue copper oxidase cueo; PDBTitle: the deletion mutant of multicopper oxidase cueo 5 c3zx1A_ 100.0 23 PDB header:oxidoreductase Chain: A: PDB Molecule:oxidoreductase, putative; PDBTitle: multicopper oxidase from campylobacter jejuni: a metallo-oxidase 6 c1of0A_ 100.0 25 PDB header:oxidoreductase Chain: A: PDB Molecule:spore coat protein a; PDBTitle: crystal structure of bacillus subtilis cota after 1h2 soaking with ebs 7 c2g23G_ 100.0 30 PDB header:oxidoreductase Chain: G: PDB Molecule:phenoxazinone synthase; PDBTitle: the crystal structure of hexameric phenoxazinone synthase 8 c2xu9A_ 100.0 27 PDB header:oxidoreductase Chain: A: PDB Molecule:laccase; PDBTitle: crystal structure of laccase from thermus thermophilus hb27 9 c1zpuE_ 100.0 19 PDB header:oxidoreductase Chain: E: PDB Molecule:iron transport multicopper oxidase fet3; PDBTitle: crystal structure of fet3p, a multicopper oxidase that functions in2 iron import 10 c2q9oA_ 100.0 22 PDB header:oxidoreductase Chain: A: PDB Molecule:laccase-1; PDBTitle: near-atomic resolution structure of a melanocarpus albomyces laccase 11 c1gycA_ 100.0 18 PDB header:oxidoreductase Chain: A: PDB Molecule:laccase 2; PDBTitle: crystal structure determination at room temperature of a2 laccase from trametes versicolor in its oxidised form3 containing a full complement of copper ions 12 c3ppsD_ 100.0 21 PDB header:oxidoreductase Chain: D: PDB Molecule:laccase; PDBTitle: crystal structure of an ascomycete fungal laccase from thielavia2 arenaria 13 c1v10A_ 100.0 18 PDB header:oxidase Chain: A: PDB Molecule:laccase; PDBTitle: structure of rigidoporus lignosus laccase from hemihedrally2 twinned crystals 14 c3aw5A_ 100.0 27 PDB header:oxidoreductase Chain: A: PDB Molecule:multicopper oxidase; PDBTitle: structure of a multicopper oxidase from the hyperthermophilic archaeon2 pyrobaculum aerophilum 15 c1a65A_ 100.0 19 PDB header:oxidoreductase Chain: A: PDB Molecule:laccase; PDBTitle: type-2 cu-depleted laccase from coprinus cinereus 16 c1asqB_ 100.0 19 PDB header:oxidoreductase Chain: B: PDB Molecule:ascorbate oxidase; PDBTitle: x-ray structures and mechanistic implications of three functional2 derivatives of ascorbate oxidase from zucchini: reduced-, peroxide-,3 and azide-forms 17 c3cdzA_ 100.0 18 PDB header:blood clotting Chain: A: PDB Molecule:coagulation factor viii heavy chain; PDBTitle: crystal structure of human factor viii 18 c1kcwA_ 100.0 16 PDB header:oxidoreductase Chain: A: PDB Molecule:ceruloplasmin; PDBTitle: x-ray crystal structure of human ceruloplasmin at 3.0 angstroms 19 c3g5wC_ 100.0 19 PDB header:metal binding protein Chain: C: PDB Molecule:multicopper oxidase type 1; PDBTitle: crystal structure of blue copper oxidase from nitrosomonas europaea 20 c2zwnA_ 100.0 20 PDB header:oxidoreductase Chain: A: PDB Molecule:two-domain type laccase; PDBTitle: crystal structure of the novel two-domain type laccase from a2 metagenome 21 c3gdcC_ not modelled 100.0 26 PDB header:oxidoreductase Chain: C: PDB Molecule:multicopper oxidase; PDBTitle: crystal structure of multicopper oxidase 22 c2zooA_ not modelled 100.0 14 PDB header:oxidoreductase Chain: A: PDB Molecule:probable nitrite reductase; PDBTitle: crystal structure of nitrite reductase from pseudoalteromonas2 haloplanktis tac125 23 c1kbwA_ not modelled 100.0 16 PDB header:oxidoreductase Chain: A: PDB Molecule:major outer membrane protein pan 1; PDBTitle: crystal structure of the soluble domain of ania from2 neisseria gonorrhoeae 24 c1wa1X_ not modelled 100.0 16 PDB header:reductase Chain: X: PDB Molecule:dissimilatory copper-containing nitrite PDBTitle: crystal structure of h313q mutant of alcaligenes2 xylosoxidans nitrite reductase 25 c3cdzB_ not modelled 100.0 21 PDB header:blood clotting Chain: B: PDB Molecule:coagulation factor viii light chain; PDBTitle: crystal structure of human factor viii 26 c2r7eB_ not modelled 100.0 21 PDB header:blood clotting Chain: B: PDB Molecule:coagulation factor viii; PDBTitle: crystal structure analysis of coagulation factor viii 27 c2dv6F_ not modelled 100.0 27 PDB header:oxidoreductase Chain: F: PDB Molecule:nitrite reductase; PDBTitle: crystal structure of nitrite reductase from hyphomicrobium2 denitrificans 28 c1mzzC_ not modelled 100.0 14 PDB header:oxidoreductase Chain: C: PDB Molecule:copper-containing nitrite reductase; PDBTitle: crystal structure of mutant (m182t)of nitrite reductase 29 c1aq8B_ not modelled 100.0 16 PDB header:oxidoreductase Chain: B: PDB Molecule:nitrite reductase; PDBTitle: structure of alcaligenes faecalis nitrite reductase reduced2 with ascorbate 30 c1sddB_ not modelled 100.0 24 PDB header:blood clotting Chain: B: PDB Molecule:coagulation factor v; PDBTitle: crystal structure of bovine factor vai 31 c3cg8B_ not modelled 100.0 21 PDB header:oxidoreductase Chain: B: PDB Molecule:laccase; PDBTitle: laccase from streptomyces coelicolor 32 c3kw8A_ not modelled 100.0 18 PDB header:oxidoreductase Chain: A: PDB Molecule:putative copper oxidase; PDBTitle: two-domain laccase from streptomyces coelicolor at 2.3 a resolution 33 c1sddA_ not modelled 100.0 22 PDB header:blood clotting Chain: A: PDB Molecule:coagulation factor v; PDBTitle: crystal structure of bovine factor vai 34 d1kv7a1 not modelled 100.0 34 Fold:Cupredoxin-like Superfamily:Cupredoxins Family:Multidomain cupredoxins 35 d1gska1 not modelled 100.0 25 Fold:Cupredoxin-like Superfamily:Cupredoxins Family:Multidomain cupredoxins 36 d1kv7a3 not modelled 100.0 34 Fold:Cupredoxin-like Superfamily:Cupredoxins Family:Multidomain cupredoxins 37 d1v10a1 not modelled 100.0 21 Fold:Cupredoxin-like Superfamily:Cupredoxins Family:Multidomain cupredoxins 38 d1gska3 not modelled 100.0 19 Fold:Cupredoxin-like Superfamily:Cupredoxins Family:Multidomain cupredoxins 39 d1oe1a1 not modelled 100.0 21 Fold:Cupredoxin-like Superfamily:Cupredoxins Family:Multidomain cupredoxins 40 d1gyca1 not modelled 100.0 23 Fold:Cupredoxin-like Superfamily:Cupredoxins Family:Multidomain cupredoxins 41 d1mzya1 not modelled 100.0 14 Fold:Cupredoxin-like Superfamily:Cupredoxins Family:Multidomain cupredoxins 42 d2bw4a1 not modelled 100.0 18 Fold:Cupredoxin-like Superfamily:Cupredoxins Family:Multidomain cupredoxins 43 d1aoza1 not modelled 100.0 25 Fold:Cupredoxin-like Superfamily:Cupredoxins Family:Multidomain cupredoxins 44 d1hfua3 not modelled 100.0 17 Fold:Cupredoxin-like Superfamily:Cupredoxins Family:Multidomain cupredoxins 45 d1kbva1 not modelled 100.0 21 Fold:Cupredoxin-like Superfamily:Cupredoxins Family:Multidomain cupredoxins 46 d2q9oa1 not modelled 100.0 25 Fold:Cupredoxin-like Superfamily:Cupredoxins Family:Multidomain cupredoxins 47 d1hfua1 not modelled 100.0 27 Fold:Cupredoxin-like Superfamily:Cupredoxins Family:Multidomain cupredoxins 48 d1kyaa1 not modelled 100.0 24 Fold:Cupredoxin-like Superfamily:Cupredoxins Family:Multidomain cupredoxins 49 d1snra1 not modelled 100.0 18 Fold:Cupredoxin-like Superfamily:Cupredoxins Family:Multidomain cupredoxins 50 d1kv7a2 not modelled 100.0 35 Fold:Cupredoxin-like Superfamily:Cupredoxins Family:Multidomain cupredoxins 51 d1kyaa3 not modelled 100.0 16 Fold:Cupredoxin-like Superfamily:Cupredoxins Family:Multidomain cupredoxins 52 d1v10a3 not modelled 100.0 16 Fold:Cupredoxin-like Superfamily:Cupredoxins Family:Multidomain cupredoxins 53 d1ndsa1 not modelled 100.0 21 Fold:Cupredoxin-like Superfamily:Cupredoxins Family:Multidomain cupredoxins 54 d1gska2 not modelled 100.0 34 Fold:Cupredoxin-like Superfamily:Cupredoxins Family:Multidomain cupredoxins 55 d1gyca3 not modelled 100.0 17 Fold:Cupredoxin-like Superfamily:Cupredoxins Family:Multidomain cupredoxins 56 d1sdda1 not modelled 100.0 16 Fold:Cupredoxin-like Superfamily:Cupredoxins Family:Multidomain cupredoxins 57 d2q9oa3 not modelled 100.0 20 Fold:Cupredoxin-like Superfamily:Cupredoxins Family:Multidomain cupredoxins 58 d1aoza3 not modelled 100.0 17 Fold:Cupredoxin-like Superfamily:Cupredoxins Family:Multidomain cupredoxins 59 d2j5wa3 not modelled 99.9 19 Fold:Cupredoxin-like Superfamily:Cupredoxins Family:Multidomain cupredoxins 60 d1hfua2 not modelled 99.9 16 Fold:Cupredoxin-like Superfamily:Cupredoxins Family:Multidomain cupredoxins 61 d2q9oa2 not modelled 99.9 22 Fold:Cupredoxin-like Superfamily:Cupredoxins Family:Multidomain cupredoxins 62 d2j5wa1 not modelled 99.9 21 Fold:Cupredoxin-like Superfamily:Cupredoxins Family:Multidomain cupredoxins 63 d1kyaa2 not modelled 99.9 16 Fold:Cupredoxin-like Superfamily:Cupredoxins Family:Multidomain cupredoxins 64 d1gyca2 not modelled 99.9 17 Fold:Cupredoxin-like Superfamily:Cupredoxins Family:Multidomain cupredoxins 65 d2j5wa4 not modelled 99.9 28 Fold:Cupredoxin-like Superfamily:Cupredoxins Family:Multidomain cupredoxins 66 d1aoza2 not modelled 99.9 18 Fold:Cupredoxin-like Superfamily:Cupredoxins Family:Multidomain cupredoxins 67 d1v10a2 not modelled 99.9 18 Fold:Cupredoxin-like Superfamily:Cupredoxins Family:Multidomain cupredoxins 68 d1sddb2 not modelled 99.9 11 Fold:Cupredoxin-like Superfamily:Cupredoxins Family:Multidomain cupredoxins 69 d2j5wa2 not modelled 99.9 18 Fold:Cupredoxin-like Superfamily:Cupredoxins Family:Multidomain cupredoxins 70 d2j5wa5 not modelled 99.9 15 Fold:Cupredoxin-like Superfamily:Cupredoxins Family:Multidomain cupredoxins 71 d1kbva2 not modelled 99.9 20 Fold:Cupredoxin-like Superfamily:Cupredoxins Family:Multidomain cupredoxins 72 d1ndsa2 not modelled 99.9 17 Fold:Cupredoxin-like Superfamily:Cupredoxins Family:Multidomain cupredoxins 73 d1kcwa2 not modelled 99.9 15 Fold:Cupredoxin-like Superfamily:Cupredoxins Family:Multidomain cupredoxins 74 d1snra2 not modelled 99.9 15 Fold:Cupredoxin-like Superfamily:Cupredoxins Family:Multidomain cupredoxins 75 d1e30a_ not modelled 99.8 17 Fold:Cupredoxin-like Superfamily:Cupredoxins Family:Plastocyanin/azurin-like 76 d2bw4a2 not modelled 99.8 16 Fold:Cupredoxin-like Superfamily:Cupredoxins Family:Multidomain cupredoxins 77 d1mzya2 not modelled 99.8 13 Fold:Cupredoxin-like Superfamily:Cupredoxins Family:Multidomain cupredoxins 78 d1fwxa1 not modelled 99.6 19 Fold:Cupredoxin-like Superfamily:Cupredoxins Family:Nitrosocyanin 79 d1ibya_ not modelled 99.6 15 Fold:Cupredoxin-like Superfamily:Cupredoxins Family:Nitrosocyanin 80 c2aanA_ not modelled 99.6 14 PDB header:electron transport Chain: A: PDB Molecule:auracyanin a; PDBTitle: auracyanin a: a "blue" copper protein from the green thermophilic2 photosynthetic bacterium,chloroflexus aurantiacus 81 d1qhqa_ not modelled 99.6 12 Fold:Cupredoxin-like Superfamily:Cupredoxins Family:Plastocyanin/azurin-like 82 d1qnia1 not modelled 99.5 17 Fold:Cupredoxin-like Superfamily:Cupredoxins Family:Nitrosocyanin 83 d1sdda2 not modelled 99.3 12 Fold:Cupredoxin-like Superfamily:Cupredoxins Family:Multidomain cupredoxins 84 d1sddb1 not modelled 99.2 19 Fold:Cupredoxin-like Superfamily:Cupredoxins Family:Multidomain cupredoxins 85 d1plaa_ not modelled 99.1 11 Fold:Cupredoxin-like Superfamily:Cupredoxins Family:Plastocyanin/azurin-like 86 d1ag6a_ not modelled 99.1 14 Fold:Cupredoxin-like Superfamily:Cupredoxins Family:Plastocyanin/azurin-like 87 d2q5ba1 not modelled 99.0 25 Fold:Cupredoxin-like Superfamily:Cupredoxins Family:Plastocyanin/azurin-like 88 d2plta_ not modelled 98.9 13 Fold:Cupredoxin-like Superfamily:Cupredoxins Family:Plastocyanin/azurin-like 89 d2ccwa1 not modelled 98.8 13 Fold:Cupredoxin-like Superfamily:Cupredoxins Family:Plastocyanin/azurin-like 90 d1jzga_ not modelled 98.8 10 Fold:Cupredoxin-like Superfamily:Cupredoxins Family:Plastocyanin/azurin-like 91 d1joia_ not modelled 98.8 9 Fold:Cupredoxin-like Superfamily:Cupredoxins Family:Plastocyanin/azurin-like 92 d1pcsa_ not modelled 98.7 14 Fold:Cupredoxin-like Superfamily:Cupredoxins Family:Plastocyanin/azurin-like 93 d2jxma1 not modelled 98.7 12 Fold:Cupredoxin-like Superfamily:Cupredoxins Family:Plastocyanin/azurin-like 94 d1iuza_ not modelled 98.7 13 Fold:Cupredoxin-like Superfamily:Cupredoxins Family:Plastocyanin/azurin-like 95 d1oe1a2 not modelled 98.7 18 Fold:Cupredoxin-like Superfamily:Cupredoxins Family:Multidomain cupredoxins 96 d7pcya_ not modelled 98.7 15 Fold:Cupredoxin-like Superfamily:Cupredoxins Family:Plastocyanin/azurin-like 97 d9pcya_ not modelled 98.6 14 Fold:Cupredoxin-like Superfamily:Cupredoxins Family:Plastocyanin/azurin-like 98 d1bypa_ not modelled 98.6 16 Fold:Cupredoxin-like Superfamily:Cupredoxins Family:Plastocyanin/azurin-like 99 c3sbrF_ not modelled 98.5 18 PDB header:oxidoreductase Chain: F: PDB Molecule:nitrous-oxide reductase; PDBTitle: pseudomonas stutzeri nitrous oxide reductase, p1 crystal form with2 substrate 100 d2cj3a1 not modelled 98.5 16 Fold:Cupredoxin-like Superfamily:Cupredoxins Family:Plastocyanin/azurin-like 101 d1cuoa_ not modelled 98.4 9 Fold:Cupredoxin-like Superfamily:Cupredoxins Family:Plastocyanin/azurin-like 102 d1bxua_ not modelled 98.4 23 Fold:Cupredoxin-like Superfamily:Cupredoxins Family:Plastocyanin/azurin-like 103 d1azca_ not modelled 98.4 8 Fold:Cupredoxin-like Superfamily:Cupredoxins Family:Plastocyanin/azurin-like 104 d1cc3a_ not modelled 98.4 7 Fold:Cupredoxin-like Superfamily:Cupredoxins Family:Plastocyanin/azurin-like 105 c2iwkB_ not modelled 98.3 20 PDB header:oxidoreductase Chain: B: PDB Molecule:nitrous oxide reductase; PDBTitle: inhibitor-bound form of nitrous oxide reductase from2 achromobacter cycloclastes at 1.7 angstrom resolution 106 c3ef4A_ not modelled 98.3 16 PDB header:electron transport Chain: A: PDB Molecule:blue copper protein; PDBTitle: crystal structure of native pseudoazurin from2 hyphomicrobium denitrificans 107 c2h47C_ not modelled 98.3 11 PDB header:oxidoreductase/electron transport Chain: C: PDB Molecule:azurin; PDBTitle: crystal structure of an electron transfer complex between2 aromatic amine dephydrogenase and azurin from alcaligenes3 faecalis (form 1) 108 d1paza_ not modelled 98.2 15 Fold:Cupredoxin-like Superfamily:Cupredoxins Family:Plastocyanin/azurin-like 109 d1kdja_ not modelled 98.2 11 Fold:Cupredoxin-like Superfamily:Cupredoxins Family:Plastocyanin/azurin-like 110 d1plca_ not modelled 98.2 13 Fold:Cupredoxin-like Superfamily:Cupredoxins Family:Plastocyanin/azurin-like 111 d2cuaa_ not modelled 98.2 13 Fold:Cupredoxin-like Superfamily:Cupredoxins Family:Periplasmic domain of cytochrome c oxidase subunit II 112 d1bqka_ not modelled 98.1 18 Fold:Cupredoxin-like Superfamily:Cupredoxins Family:Plastocyanin/azurin-like 113 d1adwa_ not modelled 98.1 14 Fold:Cupredoxin-like Superfamily:Cupredoxins Family:Plastocyanin/azurin-like 114 d1id2a_ not modelled 98.1 17 Fold:Cupredoxin-like Superfamily:Cupredoxins Family:Plastocyanin/azurin-like 115 c3c75B_ not modelled 98.1 16 PDB header:oxidoreductase Chain: B: PDB Molecule:amicyanin; PDBTitle: paracoccus versutus methylamine dehydrogenase in complex2 with amicyanin 116 c1qniE_ not modelled 98.1 21 PDB header:oxidoreductase Chain: E: PDB Molecule:nitrous-oxide reductase; PDBTitle: crystal structure of nitrous oxide reductase from2 pseudomonas nautica, at 2.4a resolution 117 d1pmya_ not modelled 98.1 12 Fold:Cupredoxin-like Superfamily:Cupredoxins Family:Plastocyanin/azurin-like 118 d1rkra_ not modelled 98.0 8 Fold:Cupredoxin-like Superfamily:Cupredoxins Family:Plastocyanin/azurin-like 119 d2ov0a1 not modelled 98.0 20 Fold:Cupredoxin-like Superfamily:Cupredoxins Family:Plastocyanin/azurin-like 120 d1nwpa_ not modelled 97.9 6 Fold:Cupredoxin-like Superfamily:Cupredoxins Family:Plastocyanin/azurin-like

Binding site prediction

Due to computational demand, binding site predictions are not run for batch jobs

If you want to predict binding sites, please manually submit your model of choice to 3DLigandSite

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
If you use the binding site predictions from 3DLigandSite, please also cite:
3DLigandSite: predicting ligand-binding sites using similar structures.
Wass MN, Kelley LA and Sternberg MJ Nucleic Acids Research 38, W469-73 (2010) [PubMed]
© Structural Bioinformatics Group Imperial College London Lawrence Kelley, Benjamin Jefferys Disclaimer Terms and Conditions	Component software Template detection: HHpred 1.51 Secondary structure prediction: Psi-pred 2.5 Disorder prediction: Disopred 2.4 Transmembrane prediction: Memsat_SVM Multi-template modelling and ab initio: Poing 1.0