Fold library entry viewer: c1asqB_

Added to library: Tue Mar 16 11:56:00 2010
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	S	Q	I	R	H	Y	K	W	E	V	E	Y	M	F	W	A	P	N	C	N	E	N	I	V	M	G	I	N	G	Q	F	P	G	P	T	I	R	A	N	A	G	D	S	V	V	V	E	L	T	N	K	L	H	T	E	G	V	V	I	H	W	H	G	I	L	Q	R	G	T	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																	T	T	S	S								T	T	B	S	S								T	T												S	S			B						T				T	T		G
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	W	A	D	G	T	A	S	I	S	Q	C	A	I	N	P	G	E	T	F	F	Y	N	F	T	V	D	N	P	G	T	F	F	Y	H	G	H	L	G	M	Q	R	S	A	G	L	Y	G	S	L	I	V	D	P	P	Q	G	K	K	E	P	F	H	Y	D	G	E	I	N	L	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	G	G	S			B	T	T	T	B			B		T	T											S										S	T	T	G	G	G	G	T										S	T	T				S	S			S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	L	S	D	W	W	H	Q	S	I	H	K	Q	E	V	G	L	S	S	K	P	I	R	W	I	G	E	P	Q	T	I	L	L	N	G	R	G	Q	F	D	C	S	I	A	A	K	Y	D	S	N	L	E	P	C	K	L	K	G	S	E	S	C	A	P	Y	I	F	H	V	S	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						S	S											S	S	S						S		S					T	T	B			S	S	S	B	T	T	G	G	G		T	T	S		B					S		S	T	T	S								T
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	K	K	T	Y	R	I	R	I	A	S	T	T	A	L	A	A	L	N	F	A	I	G	N	H	Q	L	L	V	V	E	A	D	G	N	Y	V	Q	P	F	Y	T	S	D	I	D	I	Y	S	G	E	S	Y	S	V	L	I	T	T	D	Q	N	P	S	E	N	Y	W	V	S	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T												S	S								T	T	B								T	T									S						T	T											S		T	T	S
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	G	T	R	A	R	H	P	N	T	P	P	G	L	T	L	L	N	Y	L	P	N	S	V	S	K	L	P	T	S	P	P	P	Q	T	P	A	W	D	D	F	D	R	S	K	N	F	T	Y	R	I	T	A	A	M	G	S	P	K	P	P	V	K	F	N	R	R	I	F	L	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				S	S				S										T	T	S		T	T	S			S	S								T	T										T	T			B		T	T	S					S	S		S
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	N	T	Q	N	V	I	N	G	Y	V	K	W	A	I	N	D	V	S	L	A	L	P	P	T	P	Y	L	G	A	M	K	Y	N	L	L	H	A	F	D	Q	N	P	P	P	E	V	F	P	E	D	Y	D	I	D	T	P	P	T	N	E	K	T	R	I	G	N	G	V	Y	Q
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							T	T							T	T							S	S								T	T		T	T	S	S			S								T	T			T	T	S					S	S
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	F	K	I	G	E	V	V	D	V	I	L	Q	N	A	N	M	M	K	E	N	L	S	E	T	H	P	W	H	L	H	G	H	D	F	W	V	L	G	Y	G	D	G	K	F	S	A	E	E	E	S	S	L	N	L	K	N	P	P	L	R	N	T	V	V	I	F	P	Y	G	W
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			T	T													S	S	T	T										S	S											S	S			G	G	G	G	G	G	S		S	S	S					S						T	T
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.
Sequence	T	A	I	R	F	V	A	D	N	P	G	V	W	A	F	H	C	H	I	E	P	H	L	H	M	G	M	G	V	V	F	A	E	G	V	E	K	V	G	R	I	P	T	K	A	L	A	C	G	G	T	A	K	S	L	I	N	N	P	K	N	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)									S									S	S						T	T									G	G	G											S								S				S

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PDB structure

FASTA sequence

Hidden Markov model

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