Fold library entry viewer: c1qniE_

Added to library: Tue Mar 16 14:37:07 2010
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	A	H	V	A	P	G	E	L	D	E	Y	Y	G	F	W	S	G	G	H	Q	G	E	V	R	V	L	G	V	P	S	M	R	E	L	M	R	I	P	V	F	N	V	D	S	A	T	G	W	G	I	T	N	E	S	K	E	I	L	G	G	D	Q	Q	Y	L	N	G	D	C	H
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					T	T				S								B	T	T									T	T	T								S	S	S			T	T	T		T	T	T	S									S	S	S			S				B
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	H	P	H	I	S	M	T	D	G	R	Y	D	G	K	Y	L	F	I	N	D	K	A	N	T	R	V	A	R	I	R	L	D	I	M	K	T	D	K	I	T	H	I	P	N	V	Q	A	I	H	G	L	R	L	Q	K	V	P	K	T	N	Y	V	F	C	N	A	E	F	V	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)								T	T												T	T	T	T							T	T	T	T									T	T												S	S	B										S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	P	Q	P	N	D	G	T	D	F	S	L	D	N	S	Y	T	M	F	T	A	I	D	A	E	T	M	D	V	A	W	Q	V	I	V	D	G	N	L	D	N	T	D	A	D	Y	T	G	K	Y	A	T	S	T	C	Y	N	S	E	R	A	V	D	L	A	G	T	M	R	N	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		S	S		S	S	S				G	G	G										T	T	T										S	S									S	S	S	S							S		T	T			S	S					T		S	S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	R	D	W	V	V	V	F	N	V	E	R	I	A	A	A	V	K	A	G	N	F	K	T	I	G	D	S	K	V	P	V	V	D	G	R	G	E	S	E	F	T	R	Y	I	P	V	P	K	N	P	H	G	L	N	T	S	P	D	G	K	Y	F	I	A	N	G	K	L	S	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																		T	T			B			T	T									S	S	S		S	S								S	S								T	T	S								T	T	S	S
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	T	V	S	V	I	A	I	D	K	L	D	D	L	F	E	D	K	I	E	L	R	D	T	I	V	A	E	P	E	L	G	L	G	P	L	H	T	T	F	D	G	R	G	N	A	Y	T	T	L	F	I	D	S	Q	V	C	K	W	N	I	A	D	A	I	K	H	Y	N	G	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	B						G	G	G					T	T	T	S	S		G	G	G	G						B			S									S	S	S							T	T	T	T																T
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	R	V	N	Y	I	R	Q	K	L	D	V	Q	Y	Q	P	G	H	N	H	A	S	L	T	E	S	R	D	A	D	G	K	W	L	V	V	L	S	K	F	S	K	D	R	F	L	P	V	G	P	L	H	P	E	N	D	Q	L	I	D	I	S	G	E	E	M	K	L	V	H	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)												S	S								T	T	T	T	S	T	T											S			T	T	S	S				S	S	S											S	S	S	S
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	G	P	T	Y	A	E	P	H	D	C	I	L	V	R	R	D	Q	I	K	T	K	K	I	Y	E	R	N	D	P	Y	F	A	S	C	R	A	Q	A	E	K	D	G	V	T	L	E	S	D	N	K	V	I	R	D	G	N	K	V	R	V	Y	M	T	S	V	A	P	Q	Y	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				S	S										G	G	G					S	S			T	T		G	G	G											T			T	T	T								T	T										T	T			S
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	M	T	D	F	K	V	K	E	G	D	E	V	T	V	Y	I	T	N	L	D	M	V	E	D	V	T	H	G	F	C	M	V	N	H	G	V	S	M	E	I	S	P	Q	Q	T	A	S	V	T	F	T	A	G	K	P	G	V	Y	W	Y	Y	C	N	W	F	C	H	A	L	H
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		S						T	T													S	T	T								T	T	S								T	T											S	S									S			S	T	T	G
	.	.	.	.	.	.	.	.	.	570	.	.
Sequence	M	E	M	V	G	R	M	L	V	E	A	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	G	G

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PDB structure

FASTA sequence

Hidden Markov model

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