Email l.a.kelley@imperial.ac.uk Description P0A850 Date Thu Jan 5 11:06:54 GMT 2012 Unique Job ID 238d7a8cc45c3e49

Detailed template information

# Template Alignment Coverage 3D Model Confidence % i.d. Template Information

1 c1w26B_ 100.0 97 PDB header:chaperone Chain: B: PDB Molecule:trigger factor; PDBTitle: trigger factor in complex with the ribosome forms a2 molecular cradle for nascent proteins 2 c1t11A_ 100.0 71 PDB header:chaperone Chain: A: PDB Molecule:trigger factor; PDBTitle: trigger factor 3 c3gtyX_ 100.0 20 PDB header:chaperone/ribosomal protein Chain: X: PDB Molecule:trigger factor; PDBTitle: promiscuous substrate recognition in folding and assembly activities2 of the trigger factor chaperone 4 d1w26a1 100.0 97 Fold:Triger factor/SurA peptide-binding domain-like Superfamily:Triger factor/SurA peptide-binding domain-like Family:TF C-terminus 5 d1t11a2 100.0 64 Fold:Ribosome binding domain-like Superfamily:Trigger factor ribosome-binding domain Family:Trigger factor ribosome-binding domain 6 d1w26a2 100.0 98 Fold:Ribosome binding domain-like Superfamily:Trigger factor ribosome-binding domain Family:Trigger factor ribosome-binding domain 7 d1p9ya_ 99.9 99 Fold:Ribosome binding domain-like Superfamily:Trigger factor ribosome-binding domain Family:Trigger factor ribosome-binding domain 8 d1w26a3 99.9 97 Fold:FKBP-like Superfamily:FKBP-like Family:FKBP immunophilin/proline isomerase 9 c2nsaA_ 99.9 13 PDB header:chaperone Chain: A: PDB Molecule:trigger factor; PDBTitle: structures of and interactions between domains of trigger factor from2 themotoga maritim 10 d1t11a3 99.9 74 Fold:FKBP-like Superfamily:FKBP-like Family:FKBP immunophilin/proline isomerase 11 c2nscA_ 99.8 23 PDB header:chaperone Chain: A: PDB Molecule:trigger factor; PDBTitle: structures of and interactions between domains of trigger factor from2 themotoga maritima 12 c2d3o1_ 99.8 23 PDB header:ribosome Chain: 1: PDB Molecule:trigger factor; PDBTitle: structure of ribosome binding domain of the trigger factor2 on the 50s ribosomal subunit from d. radiodurans 13 d1l1pa_ 99.8 99 Fold:FKBP-like Superfamily:FKBP-like Family:FKBP immunophilin/proline isomerase 14 d1t11a1 99.8 75 Fold:Triger factor/SurA peptide-binding domain-like Superfamily:Triger factor/SurA peptide-binding domain-like Family:TF C-terminus 15 d1hxva_ 99.7 33 Fold:FKBP-like Superfamily:FKBP-like Family:FKBP immunophilin/proline isomerase 16 c1hxvA_ 99.7 33 PDB header:chaperone Chain: A: PDB Molecule:trigger factor; PDBTitle: ppiase domain of the mycoplasma genitalium trigger factor 17 c3prdA_ 99.3 25 PDB header:chaperone, isomerase Chain: A: PDB Molecule:fkbp-type peptidyl-prolyl cis-trans isomerase; PDBTitle: structural analysis of protein folding by the methanococcus jannaschii2 chaperone fkbp26 18 c3pr9A_ 98.9 29 PDB header:chaperone Chain: A: PDB Molecule:fkbp-type peptidyl-prolyl cis-trans isomerase; PDBTitle: structural analysis of protein folding by the methanococcus jannaschii2 chaperone fkbp26 19 c3cgnA_ 98.9 35 PDB header:isomerase Chain: A: PDB Molecule:peptidyl-prolyl cis-trans isomerase; PDBTitle: crystal structure of thermophilic slyd 20 c2kfwA_ 98.8 27 PDB header:isomerase Chain: A: PDB Molecule:fkbp-type peptidyl-prolyl cis-trans isomerase PDBTitle: solution structure of full-length slyd from e.coli 21 c2k8iA_ not modelled 98.8 27 PDB header:isomerase Chain: A: PDB Molecule:peptidyl-prolyl cis-trans isomerase; PDBTitle: solution structure of e.coli slyd 22 c2pbcD_ not modelled 98.7 28 PDB header:isomerase Chain: D: PDB Molecule:fk506-binding protein 2; PDBTitle: fk506-binding protein 2 23 d1ix5a_ not modelled 98.5 29 Fold:FKBP-like Superfamily:FKBP-like Family:FKBP immunophilin/proline isomerase 24 c2kr7A_ not modelled 98.5 20 PDB header:isomerase Chain: A: PDB Molecule:fkbp-type peptidyl-prolyl cis-trans isomerase slyd; PDBTitle: solution structure of helicobacter pylori slyd 25 d1c9ha_ not modelled 98.3 22 Fold:FKBP-like Superfamily:FKBP-like Family:FKBP immunophilin/proline isomerase 26 c1q6uA_ not modelled 98.3 23 PDB header:isomerase Chain: A: PDB Molecule:fkbp-type peptidyl-prolyl cis-trans isomerase fkpa; PDBTitle: crystal structure of fkpa from escherichia coli 27 c2vcdA_ not modelled 98.3 25 PDB header:isomerase Chain: A: PDB Molecule:outer membrane protein mip; PDBTitle: solution structure of the fkbp-domain of legionella2 pneumophila mip in complex with rapamycin 28 d1fd9a_ not modelled 98.3 25 Fold:FKBP-like Superfamily:FKBP-like Family:FKBP immunophilin/proline isomerase 29 d1q6ha_ not modelled 98.3 23 Fold:FKBP-like Superfamily:FKBP-like Family:FKBP immunophilin/proline isomerase 30 d1kt0a2 not modelled 98.2 24 Fold:FKBP-like Superfamily:FKBP-like Family:FKBP immunophilin/proline isomerase 31 c2d9fA_ not modelled 98.2 16 PDB header:isomerase Chain: A: PDB Molecule:fk506-binding protein 8 variant; PDBTitle: solution structure of ruh-047, an fkbp domain from human2 cdna 32 d1jvwa_ not modelled 98.2 14 Fold:FKBP-like Superfamily:FKBP-like Family:FKBP immunophilin/proline isomerase 33 d2ppna1 not modelled 98.2 22 Fold:FKBP-like Superfamily:FKBP-like Family:FKBP immunophilin/proline isomerase 34 c2vn1A_ not modelled 98.2 20 PDB header:isomerase Chain: A: PDB Molecule:70 kda peptidylprolyl isomerase; PDBTitle: crystal structure of the fk506-binding domain of plasmodium2 falciparum fkbp35 in complex with fk506 35 d1yata_ not modelled 98.2 28 Fold:FKBP-like Superfamily:FKBP-like Family:FKBP immunophilin/proline isomerase 36 c2lgoA_ not modelled 98.1 23 PDB header:isomerase Chain: A: PDB Molecule:fkbp; PDBTitle: solution nmr structure of a fkbp-type peptidyl-prolyl cis-trans2 isomerase from giardia lamblia, seattle structural genomics center3 for infectious disease target gilaa.00840.a 37 c3jxvA_ not modelled 98.1 17 PDB header:isomerase Chain: A: PDB Molecule:70 kda peptidyl-prolyl isomerase; PDBTitle: crystal structure of the 3 fkbp domains of wheat fkbp73 38 c2ke0A_ not modelled 98.1 28 PDB header:isomerase Chain: A: PDB Molecule:peptidyl-prolyl cis-trans isomerase; PDBTitle: solution structure of peptidyl-prolyl cis-trans isomerase from2 burkholderia pseudomallei 39 d1q1ca1 not modelled 98.1 23 Fold:FKBP-like Superfamily:FKBP-like Family:FKBP immunophilin/proline isomerase 40 c1q1cA_ not modelled 98.1 14 PDB header:isomerase Chain: A: PDB Molecule:fk506-binding protein 4; PDBTitle: crystal structure of n(1-260) of human fkbp52 41 c1rouA_ not modelled 98.1 23 PDB header:rotamase (isomerase) Chain: A: PDB Molecule:fkbp59-i; PDBTitle: structure of fkbp59-i, the n-terminal domain of a 59 kda2 fk506-binding protein, nmr, 22 structures 42 c2jwxA_ not modelled 98.1 17 PDB header:apoptosis, isomerase Chain: A: PDB Molecule:fk506-binding protein 8 variant; PDBTitle: solution structure of the n-terminal domain of human fkbp382 (fkbp38ntd) 43 d1kt0a3 not modelled 98.1 14 Fold:FKBP-like Superfamily:FKBP-like Family:FKBP immunophilin/proline isomerase 44 c3o5dB_ not modelled 98.0 14 PDB header:isomerase Chain: B: PDB Molecule:peptidyl-prolyl cis-trans isomerase fkbp5; PDBTitle: crystal structure of a fragment of fkbp51 comprising the fk1 and fk22 domains 45 d1kt1a3 not modelled 98.0 14 Fold:FKBP-like Superfamily:FKBP-like Family:FKBP immunophilin/proline isomerase 46 c3o5fA_ not modelled 98.0 23 PDB header:isomerase Chain: A: PDB Molecule:peptidyl-prolyl cis-trans isomerase fkbp5; PDBTitle: fk1 domain of fkbp51, crystal form vii 47 d1kt1a2 not modelled 98.0 19 Fold:FKBP-like Superfamily:FKBP-like Family:FKBP immunophilin/proline isomerase 48 d1r9ha_ not modelled 97.9 18 Fold:FKBP-like Superfamily:FKBP-like Family:FKBP immunophilin/proline isomerase 49 d1q1ca2 not modelled 97.9 14 Fold:FKBP-like Superfamily:FKBP-like Family:FKBP immunophilin/proline isomerase 50 d1pbka_ not modelled 97.9 23 Fold:FKBP-like Superfamily:FKBP-like Family:FKBP immunophilin/proline isomerase 51 c3oe2A_ not modelled 97.9 21 PDB header:isomerase Chain: A: PDB Molecule:peptidyl-prolyl cis-trans isomerase; PDBTitle: 1.6 a crystal structure of peptidyl-prolyl cis-trans isomerase ppiase2 from pseudomonas syringae pv. tomato str. dc3000 (pspto dc3000) 52 c1zxjB_ not modelled 97.8 19 PDB header:structural genomics, unknown function Chain: B: PDB Molecule:hypothetical protein mg377 homolog; PDBTitle: crystal structure of the hypthetical mycoplasma protein,2 mpn555 53 c1qz2B_ not modelled 97.7 9 PDB header:isomerase/chaperone Chain: B: PDB Molecule:fk506-binding protein 4; PDBTitle: crystal structure of fkbp52 c-terminal domain complex with2 the c-terminal peptide meevd of hsp90 54 c1kt0A_ not modelled 97.7 24 PDB header:isomerase Chain: A: PDB Molecule:51 kda fk506-binding protein; PDBTitle: structure of the large fkbp-like protein, fkbp51, involved in steroid2 receptor complexes 55 d1m5ya1 not modelled 97.7 12 Fold:Triger factor/SurA peptide-binding domain-like Superfamily:Triger factor/SurA peptide-binding domain-like Family:Porin chaperone SurA, peptide-binding domain 56 c3b7xA_ not modelled 97.6 18 PDB header:isomerase Chain: A: PDB Molecule:fk506-binding protein 6; PDBTitle: crystal structure of human fk506-binding protein 6 57 c2f4eB_ not modelled 97.5 14 PDB header:signaling protein Chain: B: PDB Molecule:atfkbp42; PDBTitle: n-terminal domain of fkbp42 from arabidopsis thaliana 58 d1u79a_ not modelled 96.9 19 Fold:FKBP-like Superfamily:FKBP-like Family:FKBP immunophilin/proline isomerase 59 c1m5yB_ not modelled 96.9 10 PDB header:isomerase, cell cycle Chain: B: PDB Molecule:survival protein sura; PDBTitle: crystallographic structure of sura, a molecular chaperone2 that facilitates outer membrane porin folding 60 c2if4A_ not modelled 96.3 12 PDB header:signaling protein Chain: A: PDB Molecule:atfkbp42; PDBTitle: crystal structure of a multi-domain immunophilin from2 arabidopsis thaliana 61 c2pv3B_ not modelled 93.5 14 PDB header:isomerase Chain: B: PDB Molecule:chaperone sura; PDBTitle: crystallographic structure of sura fragment lacking the second2 peptidyl-prolyl isomerase domain complexed with peptide nftlkfwdifrk 62 c3nrkA_ not modelled 91.0 14 PDB header:unknown function Chain: A: PDB Molecule:lic12922; PDBTitle: the crystal structure of the leptospiral hypothetical protein lic12922 63 c2p4vA_ not modelled 90.8 14 PDB header:transcription Chain: A: PDB Molecule:transcription elongation factor greb; PDBTitle: crystal structure of the transcript cleavage factor, greb2 at 2.6a resolution 64 c3htxA_ not modelled 89.4 17 PDB header:transferase/rna Chain: A: PDB Molecule:hen1; PDBTitle: crystal structure of small rna methyltransferase hen1 65 c3rgcB_ not modelled 88.7 7 PDB header:chaperone Chain: B: PDB Molecule:possible periplasmic protein; PDBTitle: the virulence factor peb4 and the periplasmic protein cj1289 are two2 structurally related sura-like chaperones in the human pathogen3 campylobacter jejuni 66 c1grjA_ not modelled 84.0 14 PDB header:transcription regulation Chain: A: PDB Molecule:grea protein; PDBTitle: grea transcript cleavage factor from escherichia coli 67 c3bmbB_ not modelled 79.7 17 PDB header:rna binding protein Chain: B: PDB Molecule:regulator of nucleoside diphosphate kinase; PDBTitle: crystal structure of a new rna polymerase interacting2 protein 68 c2etnA_ not modelled 74.3 14 PDB header:transcription Chain: A: PDB Molecule:anti-cleavage anti-grea transcription factor PDBTitle: crystal structure of thermus aquaticus gfh1 69 d2f23a2 not modelled 72.2 19 Fold:FKBP-like Superfamily:FKBP-like Family:GreA transcript cleavage factor, C-terminal domain 70 c3s6bA_ not modelled 66.4 16 PDB header:hydrolase Chain: A: PDB Molecule:methionine aminopeptidase; PDBTitle: crystal structure of methionine aminopeptidase 1b from plasmodium2 falciparum, pf10_0150 71 d1jmxa1 not modelled 66.1 8 Fold:Cytochrome c Superfamily:Cytochrome c Family:Quinohemoprotein amine dehydrogenase A chain, domains 1 and 2 72 d2etna2 not modelled 65.6 17 Fold:FKBP-like Superfamily:FKBP-like Family:GreA transcript cleavage factor, C-terminal domain 73 c3rfwA_ not modelled 65.3 24 PDB header:chaperone Chain: A: PDB Molecule:cell-binding factor 2; PDBTitle: the virulence factor peb4 and the periplasmic protein cj1289 are two2 structurally-related sura-like chaperones in the human pathogen3 campylobacter jejuni 74 d1pbya1 not modelled 63.3 5 Fold:Cytochrome c Superfamily:Cytochrome c Family:Quinohemoprotein amine dehydrogenase A chain, domains 1 and 2 75 c2pn0D_ not modelled 55.4 18 PDB header:transcription Chain: D: PDB Molecule:prokaryotic transcription elongation factor PDBTitle: prokaryotic transcription elongation factor grea/greb from2 nitrosomonas europaea 76 c2wwbA_ not modelled 51.2 11 PDB header:ribosome Chain: A: PDB Molecule:protein transport protein sec61 subunit alpha isoform 1; PDBTitle: cryo-em structure of the mammalian sec61 complex bound to the2 actively translating wheat germ 80s ribosome 77 c3j01A_ not modelled 48.9 17 PDB header:ribosome/ribosomal protein Chain: A: PDB Molecule:preprotein translocase secy subunit; PDBTitle: structure of the ribosome-secye complex in the membrane environment 78 c3dinF_ not modelled 43.6 19 PDB header:membrane protein, protein transport Chain: F: PDB Molecule:preprotein translocase subunit secy; PDBTitle: crystal structure of the protein-translocation complex formed by the2 secy channel and the seca atpase 79 d1grja2 not modelled 43.3 15 Fold:FKBP-like Superfamily:FKBP-like Family:GreA transcript cleavage factor, C-terminal domain 80 c2wwaA_ not modelled 42.8 13 PDB header:ribosome Chain: A: PDB Molecule:sec sixty-one protein homolog; PDBTitle: cryo-em structure of idle yeast ssh1 complex bound to the2 yeast 80s ribosome 81 c3dl8H_ not modelled 42.6 24 PDB header:protein transport Chain: H: PDB Molecule:preprotein translocase subunit secy; PDBTitle: structure of the complex of aquifex aeolicus secyeg and2 bacillus subtilis seca 82 d1b8za_ not modelled 41.9 32 Fold:IHF-like DNA-binding proteins Superfamily:IHF-like DNA-binding proteins Family:Prokaryotic DNA-bending protein 83 c2akiY_ not modelled 41.0 25 PDB header:protein transport Chain: Y: PDB Molecule:preprotein translocase secy subunit; PDBTitle: normal mode-based flexible fitted coordinates of a2 translocating secyeg protein-conducting channel into the3 cryo-em map of a secyeg-nascent chain-70s ribosome complex4 from e. coli 84 c3mp7A_ not modelled 35.8 38 PDB header:protein transport Chain: A: PDB Molecule:preprotein translocase subunit secy; PDBTitle: lateral opening of a translocon upon entry of protein suggests the2 mechanism of insertion into membranes 85 c2zqpY_ not modelled 33.8 17 PDB header:protein transport Chain: Y: PDB Molecule:preprotein translocase secy subunit; PDBTitle: crystal structure of secye translocon from thermus2 thermophilus 86 c2rhfA_ not modelled 31.0 19 PDB header:hydrolase Chain: A: PDB Molecule:dna helicase recq; PDBTitle: d. radiodurans recq hrdc domain 3 87 c1yw7A_ not modelled 30.8 16 PDB header:hydrolase Chain: A: PDB Molecule:methionine aminopeptidase 2; PDBTitle: h-metap2 complexed with a444148 88 c2q8kA_ not modelled 30.2 26 PDB header:transcription Chain: A: PDB Molecule:proliferation-associated protein 2g4; PDBTitle: the crystal structure of ebp1 89 c3i18A_ not modelled 28.9 27 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:lmo2051 protein; PDBTitle: crystal structure of the pdz domain of the sdrc-like protein2 (lmo2051) from listeria monocytogenes, northeast structural3 genomics consortium target lmr166b 90 c1b6aA_ not modelled 28.4 19 PDB header:angiogenesis inhibitor Chain: A: PDB Molecule:methionine aminopeptidase; PDBTitle: human methionine aminopeptidase 2 complexed with tnp-470 91 c2bpbB_ not modelled 27.8 19 PDB header:oxidoreductase Chain: B: PDB Molecule:sulfite\:cytochrome c oxidoreductase subunit b; PDBTitle: sulfite dehydrogenase from starkeya novella 92 c1yx3A_ not modelled 26.9 15 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:hypothetical protein dsrc; PDBTitle: nmr structure of allochromatium vinosum dsrc: northeast2 structural genomics consortium target op4 93 c2g6pA_ not modelled 25.9 19 PDB header:hydrolase Chain: A: PDB Molecule:methionine aminopeptidase 1; PDBTitle: crystal structure of truncated (delta 1-89) human methionine2 aminopeptidase type 1 in complex with pyridyl pyrimidine derivative 94 c2gz5A_ not modelled 25.9 19 PDB header:hydrolase Chain: A: PDB Molecule:methionine aminopeptidase 1; PDBTitle: human type 1 methionine aminopeptidase in complex with ovalicin at 1.12 ang 95 d1hmja_ not modelled 25.8 16 Fold:RPB5-like RNA polymerase subunit Superfamily:RPB5-like RNA polymerase subunit Family:RPB5 96 d1wuda1 not modelled 24.6 17 Fold:SAM domain-like Superfamily:HRDC-like Family:HRDC domain from helicases 97 d1qxya_ not modelled 23.6 19 Fold:Creatinase/aminopeptidase Superfamily:Creatinase/aminopeptidase Family:Creatinase/aminopeptidase 98 c2xzmO_ not modelled 23.0 11 PDB header:ribosome Chain: O: PDB Molecule:rps13e; PDBTitle: crystal structure of the eukaryotic 40s ribosomal2 subunit in complex with initiation factor 1. this file3 contains the 40s subunit and initiation factor for4 molecule 1 99 c2vcbA_ not modelled 22.7 12 PDB header:hydrolase Chain: A: PDB Molecule:alpha-n-acetylglucosaminidase; PDBTitle: family 89 glycoside hydrolase from clostridium perfringens2 in complex with pugnac