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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c3mp7A_

Fold library idPDB HeaderMoleculeTitle
c3mp7A_PDB header: protein transportChain: A: PDB Molecule: preprotein translocase subunit secy;PDBTitle: lateral opening of a translocon upon entry of protein suggests the2 mechanism of insertion into membranes


Added to library: Tue Oct 19 11:36:42 2010
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence LRERFMWTGVALILYYVLAEIPVYGIPERIQDYFQFLRVVLAGRNGSILTLGIGPIVTAGIILQLQRVFS
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Known secondary structure (DSSP)
TTTSB
TT

SS


S
SSTTTTT
S
TTBTTSSTTTT

 .........80.........90.........100.........110.........120.........130.........140
Sequence VFMCFFEAAVWILGGAFGRVAIAVLMILQLAMGGIVLIILDELVSKWGIGSGISLFIAAGVSQTILTRSL
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Known secondary structure (DSSP) SSSSS


TSSS
S
 .........150.........160.........170.........180.........190.........200.........210
Sequence NPLTDPNPLTGQPAIVGAIPYFIQHILKGDLWGAIYRGGSAPDMLSVVATIVVFFIVVYFESMRVEIYPI
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Known secondary structure (DSSP)








SSS


S


S
SS


SSSS





 .........220.........230.........240.........250.........260.........270.........280
Sequence RFLYVSNIPIILTFALYANIQLWARVLDRLGHPWLGRFDPTTGSPISGFVLYVIPPRNIFSVIDNPVRAI
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Known secondary structure (DSSP)
SSSSTTTTS

SSB



TTS



BSGGGS


SSSTS
 .........290.........300.........310.........320.........330.........340.........350
Sequence VYLILTVIFSLLFGYLWVELTGLDARSIARIPGFRRDPRTLEKPYVTFWGSLTVALIAVLADFLGALGTG
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Known secondary structure (DSSP) SSTTGGG




TTTTTTSTT


TT
SS
S
 .........360.........370.........380.......
Sequence TGILLTVGILYRFYEEIAREQITEMFPALRKLFGAGT
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Known secondary structure (DSSP) STTSS


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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