1 c2k29A_
99.7
100
PDB header: transcriptionChain: A: PDB Molecule: antitoxin relb;
PDBTitle: structure of the dbd domain of e. coli antitoxin relb
2 c2kc8B_
94.4
100
PDB header: toxin/toxin repressorChain: B: PDB Molecule: antitoxin relb;
PDBTitle: structure of e. coli toxin rele (r81a/r83a) mutant in2 complex with antitoxin relbc (k47-l79) peptide
3 d2bj7a1
90.6
18
Fold: Ribbon-helix-helixSuperfamily: Ribbon-helix-helixFamily: CopG-like
4 c1q5vB_
87.0
26
PDB header: transcriptionChain: B: PDB Molecule: nickel responsive regulator;
PDBTitle: apo-nikr
5 c2bj3D_
84.1
20
PDB header: transcriptionChain: D: PDB Molecule: nickel responsive regulator;
PDBTitle: nikr-apo
6 d1p94a_
80.7
18
Fold: Ribbon-helix-helixSuperfamily: Ribbon-helix-helixFamily: CopG-like
7 c2kebA_
79.6
8
PDB header: dna binding proteinChain: A: PDB Molecule: dna polymerase subunit alpha b;
PDBTitle: nmr solution structure of the n-terminal domain of the dna polymerase2 alpha p68 subunit
8 c2ca9B_
77.4
17
PDB header: transcriptional regulationChain: B: PDB Molecule: putative nickel-responsive regulator;
PDBTitle: apo-nikr from helicobacter pylori in closed trans-2 conformation
9 d2hzaa1
75.6
24
Fold: Ribbon-helix-helixSuperfamily: Ribbon-helix-helixFamily: CopG-like
10 d2hzab1
74.2
26
Fold: Ribbon-helix-helixSuperfamily: Ribbon-helix-helixFamily: CopG-like
11 c2k5jB_
58.9
18
PDB header: structural genomics, unknown functionChain: B: PDB Molecule: uncharacterized protein yiif;
PDBTitle: solution structure of protein yiif from shigella flexneri2 serotype 5b (strain 8401) . northeast structural genomics3 consortium target sft1
12 d1sxjd1
50.7
20
Fold: post-AAA+ oligomerization domain-likeSuperfamily: post-AAA+ oligomerization domain-likeFamily: DNA polymerase III clamp loader subunits, C-terminal domain
13 d1mnta_
42.0
16
Fold: Ribbon-helix-helixSuperfamily: Ribbon-helix-helixFamily: Arc/Mnt-like phage repressors
14 d1y9ba1
39.5
15
Fold: Ribbon-helix-helixSuperfamily: Ribbon-helix-helixFamily: VCA0319-like
15 d2hsga1
36.0
14
Fold: lambda repressor-like DNA-binding domainsSuperfamily: lambda repressor-like DNA-binding domainsFamily: GalR/LacI-like bacterial regulator
16 d1myla_
35.9
19
Fold: Ribbon-helix-helixSuperfamily: Ribbon-helix-helixFamily: Arc/Mnt-like phage repressors
17 c1u9pA_
35.2
17
PDB header: unknown functionChain: A: PDB Molecule: parc;
PDBTitle: permuted single-chain arc
18 d1b28a_
30.1
20
Fold: Ribbon-helix-helixSuperfamily: Ribbon-helix-helixFamily: Arc/Mnt-like phage repressors
19 d1u5ta1
29.2
16
Fold: DNA/RNA-binding 3-helical bundleSuperfamily: "Winged helix" DNA-binding domainFamily: Vacuolar sorting protein domain
20 c1u5tA_
28.0
10
PDB header: transport proteinChain: A: PDB Molecule: appears to be functionally related to snf7;
PDBTitle: structure of the escrt-ii endosomal trafficking complex
21 c2kwpA_
not modelled
27.0
18
PDB header: transcriptionChain: A: PDB Molecule: transcription elongation protein nusa;
PDBTitle: solution structure of the aminoterminal domain of e. coli nusa
22 c3cuqA_
not modelled
26.7
21
PDB header: protein transportChain: A: PDB Molecule: vacuolar-sorting protein snf8;
PDBTitle: integrated structural and functional model of the human escrt-ii2 complex
23 c2zmeA_
not modelled
26.4
21
PDB header: protein transportChain: A: PDB Molecule: vacuolar-sorting protein snf8;
PDBTitle: integrated structural and functional model of the human escrt-ii2 complex
24 c1vbiA_
not modelled
26.3
20
PDB header: oxidoreductaseChain: A: PDB Molecule: type 2 malate/lactate dehydrogenase;
PDBTitle: crystal structure of type 2 malate/lactate dehydrogenase from thermus2 thermophilus hb8
25 c3ltiA_
not modelled
25.8
25
PDB header: transferaseChain: A: PDB Molecule: dna-directed rna polymerase subunit beta;
PDBTitle: crystal structure of the escherichia coli rna polymerase beta subunit2 beta2-betai4 domains
26 d1mylb_
not modelled
24.5
23
Fold: Ribbon-helix-helixSuperfamily: Ribbon-helix-helixFamily: Arc/Mnt-like phage repressors
27 c3cqrB_
not modelled
23.9
14
PDB header: oxidoreductaseChain: B: PDB Molecule: violaxanthin de-epoxidase, chloroplast;
PDBTitle: crystal structure of the lipocalin domain of violaxanthin2 de-epoxidase (vde) at ph5
28 d2cpga_
not modelled
23.5
13
Fold: Ribbon-helix-helixSuperfamily: Ribbon-helix-helixFamily: CopG-like
29 d1i4ua_
not modelled
23.3
19
Fold: LipocalinsSuperfamily: LipocalinsFamily: Retinol binding protein-like
30 d1qpza1
not modelled
22.8
21
Fold: lambda repressor-like DNA-binding domainsSuperfamily: lambda repressor-like DNA-binding domainsFamily: GalR/LacI-like bacterial regulator
31 d2bsqe1
not modelled
22.6
18
Fold: Ribbon-helix-helixSuperfamily: Ribbon-helix-helixFamily: Trafficking protein A-like
32 c2h1rA_
not modelled
22.5
19
PDB header: transferaseChain: A: PDB Molecule: dimethyladenosine transferase, putative;
PDBTitle: crystal structure of a dimethyladenosine transferase from2 plasmodium falciparum
33 c3ebwA_
not modelled
22.3
24
PDB header: allergenChain: A: PDB Molecule: per a 4 allergen;
PDBTitle: crystal structure of major allergens, per a 4 from2 cockroaches
34 d2ff4a2
not modelled
20.4
26
Fold: alpha-alpha superhelixSuperfamily: TPR-likeFamily: BTAD-like
35 c3oopA_
not modelled
20.3
22
PDB header: structural genomics, unknown functionChain: A: PDB Molecule: lin2960 protein;
PDBTitle: the structure of a protein with unknown function from listeria innocua2 clip11262
36 d1efaa1
not modelled
20.3
11
Fold: lambda repressor-like DNA-binding domainsSuperfamily: lambda repressor-like DNA-binding domainsFamily: GalR/LacI-like bacterial regulator
37 c2jucA_
not modelled
20.2
9
PDB header: unknown functionChain: A: PDB Molecule: pre-mrna-splicing factor urn1;
PDBTitle: urn1 ff domain yeast
38 d1cuka1
not modelled
20.1
31
Fold: RuvA C-terminal domain-likeSuperfamily: DNA helicase RuvA subunit, C-terminal domainFamily: DNA helicase RuvA subunit, C-terminal domain
39 d2bjca1
not modelled
19.1
11
Fold: lambda repressor-like DNA-binding domainsSuperfamily: lambda repressor-like DNA-binding domainsFamily: GalR/LacI-like bacterial regulator
40 d1uxca_
not modelled
18.1
18
Fold: lambda repressor-like DNA-binding domainsSuperfamily: lambda repressor-like DNA-binding domainsFamily: GalR/LacI-like bacterial regulator
41 c3nrwA_
not modelled
18.1
18
PDB header: recombinationChain: A: PDB Molecule: phage integrase/site-specific recombinase;
PDBTitle: crystal structure of the n-terminal domain of phage integrase/site-2 specific recombinase (tnp) from haloarcula marismortui, northeast3 structural genomics consortium target hmr208a
42 d1lcda_
not modelled
17.1
14
Fold: lambda repressor-like DNA-binding domainsSuperfamily: lambda repressor-like DNA-binding domainsFamily: GalR/LacI-like bacterial regulator
43 d2vqca1
not modelled
16.8
11
Fold: DNA/RNA-binding 3-helical bundleSuperfamily: "Winged helix" DNA-binding domainFamily: F112-like
44 c2vqcA_
not modelled
16.8
11
PDB header: dna-binding proteinChain: A: PDB Molecule: hypothetical 13.2 kda protein;
PDBTitle: structure of a dna binding winged-helix protein, f-112,2 from sulfolobus spindle-shaped virus 1.
45 d1sxjb1
not modelled
16.6
8
Fold: post-AAA+ oligomerization domain-likeSuperfamily: post-AAA+ oligomerization domain-likeFamily: DNA polymerase III clamp loader subunits, C-terminal domain
46 d1gkab_
not modelled
16.5
24
Fold: LipocalinsSuperfamily: LipocalinsFamily: Retinol binding protein-like
47 d1qwda_
not modelled
16.4
33
Fold: LipocalinsSuperfamily: LipocalinsFamily: Retinol binding protein-like
48 c2hzqA_
not modelled
16.1
10
PDB header: transport proteinChain: A: PDB Molecule: apolipoprotein d;
PDBTitle: crystal structure of human apolipoprotein d (apod) in2 complex with progesterone
49 c3h87D_
not modelled
16.0
28
PDB header: toxin/antitoxinChain: D: PDB Molecule: putative uncharacterized protein;
PDBTitle: rv0301 rv0300 toxin antitoxin complex from mycobacterium tuberculosis
50 d1l6ja1
not modelled
16.0
27
Fold: PGBD-likeSuperfamily: PGBD-likeFamily: MMP N-terminal domain
51 c3ecoB_
not modelled
15.4
24
PDB header: transcriptionChain: B: PDB Molecule: mepr;
PDBTitle: crystal structure of mepr, a transcription regulator of the2 staphylococcus aureus multidrug efflux pump mepa
52 c2lcvA_
not modelled
14.2
19
PDB header: transcription regulatorChain: A: PDB Molecule: hth-type transcriptional repressor cytr;
PDBTitle: structure of the cytidine repressor dna-binding domain; an alternate2 calculation
53 c2q37A_
not modelled
13.9
24
PDB header: plant protein, lyaseChain: A: PDB Molecule: ohcu decarboxylase;
PDBTitle: crystal structure of ohcu decarboxylase in the presence of2 (s)-allantoin
54 d2q37a1
not modelled
13.9
24
Fold: UraD-likeSuperfamily: UraD-LikeFamily: UraD-like
55 c3by0B_
not modelled
13.6
19
PDB header: ligand binding proteinChain: B: PDB Molecule: neutrophil gelatinase-associated lipocalin;
PDBTitle: crystal structure of siderocalin (ngal, lipocalin 2) w79a-r81a2 complexed with ferric enterobactin
56 c2l8nA_
not modelled
13.2
19
PDB header: transcription regulatorChain: A: PDB Molecule: transcriptional repressor cytr;
PDBTitle: nmr structure of the cytidine repressor dna binding domain in presence2 of operator half-site dna
57 c2k23A_
not modelled
12.8
29
PDB header: transport proteinChain: A: PDB Molecule: lipocalin 2;
PDBTitle: solution structure analysis of the rlcn2
58 c2xstA_
not modelled
12.6
5
PDB header: transport proteinChain: A: PDB Molecule: lipocalin 15;
PDBTitle: crystal structure of the human lipocalin 15
59 c2qwwB_
not modelled
12.5
10
PDB header: transcriptionChain: B: PDB Molecule: transcriptional regulator, marr family;
PDBTitle: crystal structure of multiple antibiotic-resistance repressor (marr)2 (yp_013417.1) from listeria monocytogenes 4b f2365 at 2.07 a3 resolution
60 d1a0pa1
not modelled
12.3
14
Fold: SAM domain-likeSuperfamily: lambda integrase-like, N-terminal domainFamily: lambda integrase-like, N-terminal domain
61 d2d0ob1
not modelled
11.9
14
Fold: Anticodon-binding domain-likeSuperfamily: B12-dependent dehydatase associated subunitFamily: Dehydratase-reactivating factor beta subunit
62 c3l4rA_
not modelled
11.5
10
PDB header: allergen, lipid binding proteinChain: A: PDB Molecule: minor allergen can f 2;
PDBTitle: crystal structure of the dog lipocalin allergen can f 2 and2 implications for cross-reactivity to the cat allergen fel d 4
63 d2pb9a1
not modelled
11.4
21
Fold: AraD/HMP-PK domain-likeSuperfamily: AraD/HMP-PK domain-likeFamily: Phosphomethylpyrimidine kinase C-terminal domain-like
64 d1epba_
not modelled
11.3
10
Fold: LipocalinsSuperfamily: LipocalinsFamily: Retinol binding protein-like
65 c2l5pA_
not modelled
10.9
18
PDB header: transport proteinChain: A: PDB Molecule: lipocalin 12;
PDBTitle: solution nmr structure of protein lipocalin 12 from rat epididymis
66 d1jhfa1
not modelled
10.8
14
Fold: DNA/RNA-binding 3-helical bundleSuperfamily: "Winged helix" DNA-binding domainFamily: LexA repressor, N-terminal DNA-binding domain
67 d1v92a_
not modelled
10.8
30
Fold: RuvA C-terminal domain-likeSuperfamily: UBA-likeFamily: TAP-C domain-like
68 c1avoA_
not modelled
10.5
17
PDB header: proteasome activatorChain: A: PDB Molecule: 11s regulator;
PDBTitle: proteasome activator reg(alpha)
69 c2rdpA_
not modelled
10.5
24
PDB header: transcriptionChain: A: PDB Molecule: putative transcriptional regulator marr;
PDBTitle: the structure of a marr family protein from bacillus2 stearothermophilus
70 c2rn7A_
not modelled
10.4
23
PDB header: unknown functionChain: A: PDB Molecule: is629 orfa;
PDBTitle: nmr solution structure of tnpe protein from shigella2 flexneri. northeast structural genomics target sfr125
71 d1gm6a_
not modelled
10.4
14
Fold: LipocalinsSuperfamily: LipocalinsFamily: Retinol binding protein-like
72 d2ieaa3
not modelled
10.3
15
Fold: TK C-terminal domain-likeSuperfamily: TK C-terminal domain-likeFamily: Transketolase C-terminal domain-like
73 d1ew3a_
not modelled
9.9
19
Fold: LipocalinsSuperfamily: LipocalinsFamily: Retinol binding protein-like
74 c3jw4C_
not modelled
9.9
18
PDB header: transcription regulatorChain: C: PDB Molecule: transcriptional regulator, marr/emrr family;
PDBTitle: the structure of a putative marr family transcriptional regulator from2 clostridium acetobutylicum
75 d1mkma1
not modelled
9.8
24
Fold: DNA/RNA-binding 3-helical bundleSuperfamily: "Winged helix" DNA-binding domainFamily: Transcriptional regulator IclR, N-terminal domain
76 d1iqpa1
not modelled
9.7
14
Fold: post-AAA+ oligomerization domain-likeSuperfamily: post-AAA+ oligomerization domain-likeFamily: DNA polymerase III clamp loader subunits, C-terminal domain
77 c3k0lA_
not modelled
9.7
16
PDB header: transcription regulatorChain: A: PDB Molecule: repressor protein;
PDBTitle: crystal structure of putative marr family transcriptional2 regulator from acinetobacter sp. adp
78 d1uxda_
not modelled
9.6
19
Fold: lambda repressor-like DNA-binding domainsSuperfamily: lambda repressor-like DNA-binding domainsFamily: GalR/LacI-like bacterial regulator
79 c2pexA_
not modelled
9.5
10
PDB header: transcription regulatorChain: A: PDB Molecule: transcriptional regulator ohrr;
PDBTitle: structure of reduced c22s ohrr from xanthamonas campestris
80 d1g7oa1
not modelled
9.4
9
Fold: GST C-terminal domain-likeSuperfamily: GST C-terminal domain-likeFamily: Glutathione S-transferase (GST), C-terminal domain
81 d1bazb_
not modelled
9.2
23
Fold: Ribbon-helix-helixSuperfamily: Ribbon-helix-helixFamily: Arc/Mnt-like phage repressors
82 c2jxnA_
not modelled
9.2
6
PDB header: unknown functionChain: A: PDB Molecule: uncharacterized protein ymr074c;
PDBTitle: solution structure of s. cerevisiae pdcd5-like protein ymr074cp
83 d1znda1
not modelled
9.2
19
Fold: LipocalinsSuperfamily: LipocalinsFamily: Retinol binding protein-like
84 d1x71a1
not modelled
9.1
19
Fold: LipocalinsSuperfamily: LipocalinsFamily: Retinol binding protein-like
85 d1iwga5
not modelled
8.9
17
Fold: Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomainsSuperfamily: Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomainsFamily: Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains
86 c2g8yB_
not modelled
8.8
18
PDB header: oxidoreductaseChain: B: PDB Molecule: malate/l-lactate dehydrogenases;
PDBTitle: the structure of a putative malate/lactate dehydrogenase from e. coli.
87 d2o8ia1
not modelled
8.8
14
Fold: UraD-likeSuperfamily: UraD-LikeFamily: UraD-like
88 d2o70a1
not modelled
8.7
17
Fold: UraD-likeSuperfamily: UraD-LikeFamily: UraD-like
89 d2doda1
not modelled
8.7
18
Fold: Another 3-helical bundleSuperfamily: FF domainFamily: FF domain
90 d1uzca_
not modelled
8.3
18
Fold: Another 3-helical bundleSuperfamily: FF domainFamily: FF domain
91 d1xkia_
not modelled
8.1
16
Fold: LipocalinsSuperfamily: LipocalinsFamily: Retinol binding protein-like
92 d2jn6a1
not modelled
8.1
13
Fold: DNA/RNA-binding 3-helical bundleSuperfamily: Homeodomain-likeFamily: Cgl2762-like
93 c2kobA_
not modelled
8.0
9
PDB header: structural genomics, unknown functionChain: A: PDB Molecule: uncharacterized protein;
PDBTitle: solution nmr structure of clolep_01837 (fragment 61-160)2 from clostridium leptum. northeast structural genomics3 consortium target qlr8a
94 d1avsa_
not modelled
7.9
14
Fold: EF Hand-likeSuperfamily: EF-handFamily: Calmodulin-like
95 d1baza_
not modelled
7.8
23
Fold: Ribbon-helix-helixSuperfamily: Ribbon-helix-helixFamily: Arc/Mnt-like phage repressors
96 d1xl3c1
not modelled
7.7
6
Fold: Type III secretion system domainSuperfamily: Type III secretion system domainFamily: TyeA-like
97 c1bdhA_
not modelled
7.7
19
PDB header: transcription/dnaChain: A: PDB Molecule: protein (purine repressor);
PDBTitle: purine repressor mutant-hypoxanthine-palindromic operator2 complex
98 d1yupa1
not modelled
7.5
26
Fold: LipocalinsSuperfamily: LipocalinsFamily: Retinol binding protein-like
99 d2isya1
not modelled
7.5
6
Fold: DNA/RNA-binding 3-helical bundleSuperfamily: "Winged helix" DNA-binding domainFamily: Iron-dependent repressor protein