Secondary structure and disorder prediction

		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60
Sequence		M	K	F	V	S	F	N	I	N	G	L	R	A	R	P	H	Q	L	E	A	I	V	E	K	H	Q	P	D	V	I	G	L	Q	E	T	K	V	H	D	D	M	F	P	L	E	E	V	A	K	L	G	Y	N	V	F	Y	H	G	Q	K
Secondary structure
SS confidence
Disorder		?
Disorder confidence
		.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120
Sequence		G	H	Y	G	V	A	L	L	T	K	E	T	P	I	A	V	R	R	G	F	P	G	D	D	E	E	A	Q	R	R	I	I	M	A	E	I	P	S	L	L	G	N	V	T	V	I	N	G	Y	F	P	Q	G	E	S	R	D	H	P	I
Secondary structure
SS confidence
Disorder																																																									?		?
Disorder confidence
		.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180
Sequence		K	F	P	A	K	A	Q	F	Y	Q	N	L	Q	N	Y	L	E	T	E	L	K	R	D	N	P	V	L	I	M	G	D	M	N	I	S	P	T	D	L	D	I	G	I	G	E	E	N	R	K	R	W	L	R	T	G	K	C	S	F	L
Secondary structure
SS confidence
Disorder																																															?	?	?
Disorder confidence
		.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
Sequence		P	E	E	R	E	W	M	D	R	L	M	S	W	G	L	V	D	T	F	R	H	A	N	P	Q	T	A	D	R	F	S	W	F	D	Y	R	S	K	G	F	D	D	N	R	G	L	R	I	D	L	L	L	A	S	Q	P	L	A	E	C
Secondary structure
SS confidence
Disorder																																						?	?	?	?
Disorder confidence
		.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.
Sequence		C	V	E	T	G	I	D	Y	E	I	R	S	M	E	K	P	S	D	H	A	P	V	W	A	T	F	R	R
Secondary structure
SS confidence
Disorder													?																?
Disorder confidence

Confidence Key
High(9)											Low (0)

?	Disordered
	Alpha helix
	Beta strand

Domain analysis

Hover over an aligned region to see model and summary info

Please note, only up to the top 20 hits are modelled to reduce computer load

Rank Aligned region

PDB 1ako chain A Region: 1 - 268 Aligned: 268 Modelled: 268 Confidence: 100.0% Identity: 100% Fold: DNase I-like Superfamily: DNase I-like Family: DNase I-like Phyre2 PDB 2voa chain B Region: 1 - 267 Aligned: 254 Modelled: 267 Confidence: 100.0% Identity: 31% PDB header:lyase Chain: B: PDB Molecule:exodeoxyribonuclease iii; PDBTitle: structure of an ap endonuclease from archaeoglobus fulgidus Phyre2 PDB 2jc4 chain A Region: 1 - 267 Aligned: 255 Modelled: 261 Confidence: 100.0% Identity: 36% PDB header:hydrolase Chain: A: PDB Molecule:exodeoxyribonuclease iii; PDBTitle: 3'-5' exonuclease (nexo) from neisseria meningitidis Phyre2 PDB 2j63 chain B Region: 1 - 267 Aligned: 261 Modelled: 267 Confidence: 100.0% Identity: 23% PDB header:lyase Chain: B: PDB Molecule:ap-endonuclease; PDBTitle: crystal structure of ap endonuclease lmap from leishmania2 major Phyre2 PDB 3g0r chain A Region: 1 - 267 Aligned: 250 Modelled: 263 Confidence: 100.0% Identity: 28% PDB header:hydrolase/dna Chain: A: PDB Molecule:exodeoxyribonuclease; PDBTitle: complex of mth0212 and an 8bp dsdna with distorted ends Phyre2 PDB 2jc5 chain A Region: 1 - 267 Aligned: 251 Modelled: 263 Confidence: 100.0% Identity: 23% PDB header:hydrolase Chain: A: PDB Molecule:exodeoxyribonuclease; PDBTitle: apurinic apyrimidinic (ap) endonuclease (nape) from2 neisseria meningitidis Phyre2 PDB 1e9n chain B Region: 1 - 267 Aligned: 251 Modelled: 267 Confidence: 100.0% Identity: 24% PDB header:dna repair Chain: B: PDB Molecule:dna-(apurinic or apyrimidinic site) lyase; PDBTitle: a second divalent metal ion in the active site of a new2 crystal form of human apurinic/apyrimidinic endonuclease,3 ape1, and its implications for the catalytic mechanism Phyre2 PDB 3teb chain A Region: 1 - 267 Aligned: 225 Modelled: 242 Confidence: 100.0% Identity: 18% PDB header:hydrolase Chain: A: PDB Molecule:endonuclease/exonuclease/phosphatase; PDBTitle: endonuclease/exonuclease/phosphatase family protein from leptotrichia2 buccalis c-1013-b Phyre2 PDB 1vyb chain A Region: 1 - 267 Aligned: 229 Modelled: 243 Confidence: 100.0% Identity: 24% Fold: DNase I-like Superfamily: DNase I-like Family: DNase I-like Phyre2 PDB 1hd7 chain A Region: 1 - 267 Aligned: 239 Modelled: 262 Confidence: 100.0% Identity: 25% Fold: DNase I-like Superfamily: DNase I-like Family: DNase I-like Phyre2 PDB 3g6s chain A Region: 1 - 267 Aligned: 230 Modelled: 241 Confidence: 100.0% Identity: 16% PDB header:hydrolase Chain: A: PDB Molecule:putative endonuclease/exonuclease/phosphatase PDBTitle: crystal structure of the2 endonuclease/exonuclease/phosphatase (bvu_0621) from3 bacteroides vulgatus. northeast structural genomics4 consortium target bvr56d Phyre2 PDB 3ngo chain A Region: 1 - 267 Aligned: 252 Modelled: 257 Confidence: 100.0% Identity: 16% PDB header:hydrolase/dna Chain: A: PDB Molecule:ccr4-not transcription complex subunit 6-like; PDBTitle: crystal structure of the human cnot6l nuclease domain in complex with2 poly(a) dna Phyre2 PDB 3mpr chain B Region: 1 - 267 Aligned: 230 Modelled: 242 Confidence: 100.0% Identity: 17% PDB header:hydrolase Chain: B: PDB Molecule:putative endonuclease/exonuclease/phosphatase family PDBTitle: crystal structure of endonuclease/exonuclease/phosphatase family2 protein from bacteroides thetaiotaomicron, northeast structural3 genomics consortium target btr318a Phyre2 PDB 2imq chain X domain 1 Region: 1 - 267 Aligned: 253 Modelled: 267 Confidence: 100.0% Identity: 13% Fold: DNase I-like Superfamily: DNase I-like Family: Inositol polyphosphate 5-phosphatase (IPP5) Phyre2 PDB 1zwx chain A domain 1 Region: 1 - 266 Aligned: 241 Modelled: 240 Confidence: 100.0% Identity: 14% Fold: DNase I-like Superfamily: DNase I-like Family: Sphingomyelin phosphodiesterase-like Phyre2 PDB 3i46 chain B Region: 1 - 267 Aligned: 241 Modelled: 241 Confidence: 99.9% Identity: 17% PDB header:toxin Chain: B: PDB Molecule:beta-hemolysin; PDBTitle: crystal structure of beta toxin from staphylococcus aureus f277a,2 p278a mutant with bound calcium ions Phyre2 PDB 3mtc chain A Region: 1 - 267 Aligned: 252 Modelled: 263 Confidence: 99.9% Identity: 14% PDB header:hydrolase/hydrolase inhibitor Chain: A: PDB Molecule:type ii inositol-1,4,5-trisphosphate 5-phosphatase; PDBTitle: crystal structure of inpp5b in complex with phosphatidylinositol 4-2 phosphate Phyre2 PDB 3l1w chain E Region: 1 - 267 Aligned: 227 Modelled: 239 Confidence: 99.9% Identity: 16% PDB header:structural genomics, unknown function Chain: E: PDB Molecule:uncharacterized protein; PDBTitle: the crystal structure of a functionally unknown conserved2 protein from enterococcus faecalis v583 Phyre2 PDB 2ddr chain A domain 1 Region: 1 - 267 Aligned: 242 Modelled: 247 Confidence: 99.9% Identity: 20% Fold: DNase I-like Superfamily: DNase I-like Family: Sphingomyelin phosphodiesterase-like Phyre2 PDB 3nr8 chain A Region: 1 - 267 Aligned: 257 Modelled: 262 Confidence: 99.9% Identity: 16% PDB header:hydrolase Chain: A: PDB Molecule:phosphatidylinositol-3,4,5-trisphosphate 5-phosphatase 2; PDBTitle: crystal structure of human ship2 Phyre2 1 d1akoa_ 2 c2voaB_ 3 c2jc4A_ 4 c2j63B_ 5 c3g0rA_ 6 c2jc5A_ 7 c1e9nB_ 8 c3tebA_ 9 d1vyba_ 10 d1hd7a_ 11 c3g6sA_ 12 c3ngoA_ 13 c3mprB_ 14 d2imqx1 15 d1zwxa1 16 c3i46B_ 17 c3mtcA_ 18 c3l1wE_ 19 d2ddra1 20 c3nr8A_ 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76 77

Detailed template information

# Template Alignment Coverage 3D Model Confidence % i.d. Template Information

1 d1akoa_ 100.0 100 Fold:DNase I-like Superfamily:DNase I-like Family:DNase I-like 2 c2voaB_ 100.0 31 PDB header:lyase Chain: B: PDB Molecule:exodeoxyribonuclease iii; PDBTitle: structure of an ap endonuclease from archaeoglobus fulgidus 3 c2jc4A_ 100.0 36 PDB header:hydrolase Chain: A: PDB Molecule:exodeoxyribonuclease iii; PDBTitle: 3'-5' exonuclease (nexo) from neisseria meningitidis 4 c2j63B_ 100.0 23 PDB header:lyase Chain: B: PDB Molecule:ap-endonuclease; PDBTitle: crystal structure of ap endonuclease lmap from leishmania2 major 5 c3g0rA_ 100.0 28 PDB header:hydrolase/dna Chain: A: PDB Molecule:exodeoxyribonuclease; PDBTitle: complex of mth0212 and an 8bp dsdna with distorted ends 6 c2jc5A_ 100.0 23 PDB header:hydrolase Chain: A: PDB Molecule:exodeoxyribonuclease; PDBTitle: apurinic apyrimidinic (ap) endonuclease (nape) from2 neisseria meningitidis 7 c1e9nB_ 100.0 24 PDB header:dna repair Chain: B: PDB Molecule:dna-(apurinic or apyrimidinic site) lyase; PDBTitle: a second divalent metal ion in the active site of a new2 crystal form of human apurinic/apyrimidinic endonuclease,3 ape1, and its implications for the catalytic mechanism 8 c3tebA_ 100.0 18 PDB header:hydrolase Chain: A: PDB Molecule:endonuclease/exonuclease/phosphatase; PDBTitle: endonuclease/exonuclease/phosphatase family protein from leptotrichia2 buccalis c-1013-b 9 d1vyba_ 100.0 24 Fold:DNase I-like Superfamily:DNase I-like Family:DNase I-like 10 d1hd7a_ 100.0 25 Fold:DNase I-like Superfamily:DNase I-like Family:DNase I-like 11 c3g6sA_ 100.0 16 PDB header:hydrolase Chain: A: PDB Molecule:putative endonuclease/exonuclease/phosphatase PDBTitle: crystal structure of the2 endonuclease/exonuclease/phosphatase (bvu_0621) from3 bacteroides vulgatus. northeast structural genomics4 consortium target bvr56d 12 c3ngoA_ 100.0 16 PDB header:hydrolase/dna Chain: A: PDB Molecule:ccr4-not transcription complex subunit 6-like; PDBTitle: crystal structure of the human cnot6l nuclease domain in complex with2 poly(a) dna 13 c3mprB_ 100.0 17 PDB header:hydrolase Chain: B: PDB Molecule:putative endonuclease/exonuclease/phosphatase family PDBTitle: crystal structure of endonuclease/exonuclease/phosphatase family2 protein from bacteroides thetaiotaomicron, northeast structural3 genomics consortium target btr318a 14 d2imqx1 100.0 13 Fold:DNase I-like Superfamily:DNase I-like Family:Inositol polyphosphate 5-phosphatase (IPP5) 15 d1zwxa1 100.0 14 Fold:DNase I-like Superfamily:DNase I-like Family:Sphingomyelin phosphodiesterase-like 16 c3i46B_ 99.9 17 PDB header:toxin Chain: B: PDB Molecule:beta-hemolysin; PDBTitle: crystal structure of beta toxin from staphylococcus aureus f277a,2 p278a mutant with bound calcium ions 17 c3mtcA_ 99.9 14 PDB header:hydrolase/hydrolase inhibitor Chain: A: PDB Molecule:type ii inositol-1,4,5-trisphosphate 5-phosphatase; PDBTitle: crystal structure of inpp5b in complex with phosphatidylinositol 4-2 phosphate 18 c3l1wE_ 99.9 16 PDB header:structural genomics, unknown function Chain: E: PDB Molecule:uncharacterized protein; PDBTitle: the crystal structure of a functionally unknown conserved2 protein from enterococcus faecalis v583 19 d2ddra1 99.9 20 Fold:DNase I-like Superfamily:DNase I-like Family:Sphingomyelin phosphodiesterase-like 20 c3nr8A_ 99.9 16 PDB header:hydrolase Chain: A: PDB Molecule:phosphatidylinositol-3,4,5-trisphosphate 5-phosphatase 2; PDBTitle: crystal structure of human ship2 21 d1wdua_ not modelled 99.9 15 Fold:DNase I-like Superfamily:DNase I-like Family:DNase I-like 22 d1sr4b_ not modelled 99.9 16 Fold:DNase I-like Superfamily:DNase I-like Family:DNase I-like 23 d2f1na1 not modelled 99.9 20 Fold:DNase I-like Superfamily:DNase I-like Family:DNase I-like 24 c2ei9A_ not modelled 99.9 14 PDB header:gene regulation Chain: A: PDB Molecule:non-ltr retrotransposon r1bmks orf2 protein; PDBTitle: crystal structure of r1bm endonuclease domain 25 d2a40b1 not modelled 99.9 16 Fold:DNase I-like Superfamily:DNase I-like Family:DNase I-like 26 c2xswB_ not modelled 99.8 16 PDB header:hydrolase Chain: B: PDB Molecule:72 kda inositol polyphosphate 5-phosphatase; PDBTitle: crystal structure of human inpp5e 27 d1i9za_ not modelled 99.8 16 Fold:DNase I-like Superfamily:DNase I-like Family:Inositol polyphosphate 5-phosphatase (IPP5) 28 d3bula2 not modelled 46.3 22 Fold:Flavodoxin-like Superfamily:Cobalamin (vitamin B12)-binding domain Family:Cobalamin (vitamin B12)-binding domain 29 c2vhiG_ not modelled 43.2 8 PDB header:hydrolase Chain: G: PDB Molecule:cg3027-pa; PDBTitle: crystal structure of a pyrimidine degrading enzyme from2 drosophila melanogaster 30 c2i2xD_ not modelled 24.3 22 PDB header:transferase Chain: D: PDB Molecule:methyltransferase 1; PDBTitle: crystal structure of methanol:cobalamin methyltransferase complex2 mtabc from methanosarcina barkeri 31 d1xrsb1 not modelled 23.4 13 Fold:Flavodoxin-like Superfamily:Cobalamin (vitamin B12)-binding domain Family:Cobalamin (vitamin B12)-binding domain 32 d1f89a_ not modelled 19.9 15 Fold:Carbon-nitrogen hydrolase Superfamily:Carbon-nitrogen hydrolase Family:Nitrilase 33 d1emsa2 not modelled 19.5 6 Fold:Carbon-nitrogen hydrolase Superfamily:Carbon-nitrogen hydrolase Family:Nitrilase 34 c1xrsB_ not modelled 17.3 13 PDB header:isomerase Chain: B: PDB Molecule:d-lysine 5,6-aminomutase beta subunit; PDBTitle: crystal structure of lysine 5,6-aminomutase in complex with plp,2 cobalamin, and 5'-deoxyadenosine 35 c2yxbA_ not modelled 16.9 37 PDB header:isomerase Chain: A: PDB Molecule:coenzyme b12-dependent mutase; PDBTitle: crystal structure of the methylmalonyl-coa mutase alpha-subunit from2 aeropyrum pernix 36 c1y80A_ not modelled 16.6 35 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:predicted cobalamin binding protein; PDBTitle: structure of a corrinoid (factor iiim)-binding protein from2 moorella thermoacetica 37 d1ccwa_ not modelled 16.1 13 Fold:Flavodoxin-like Superfamily:Cobalamin (vitamin B12)-binding domain Family:Cobalamin (vitamin B12)-binding domain 38 c1bmtB_ not modelled 15.7 22 PDB header:methyltransferase Chain: B: PDB Molecule:methionine synthase; PDBTitle: how a protein binds b12: a 3.o angstrom x-ray structure of2 the b12-binding domains of methionine synthase 39 c2gm2A_ not modelled 14.0 23 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:conserved hypothetical protein; PDBTitle: nmr structure of xanthomonas campestris xcc1710: northeast2 structural genomics consortium target xcr35 40 c1k98A_ not modelled 13.8 22 PDB header:transferase Chain: A: PDB Molecule:methionine synthase; PDBTitle: adomet complex of meth c-terminal fragment 41 c3jvvA_ not modelled 12.5 15 PDB header:atp binding protein Chain: A: PDB Molecule:twitching mobility protein; PDBTitle: crystal structure of p. aeruginosa pilt with bound amp-pcp 42 d1g6oa_ not modelled 11.5 14 Fold:P-loop containing nucleoside triphosphate hydrolases Superfamily:P-loop containing nucleoside triphosphate hydrolases Family:RecA protein-like (ATPase-domain) 43 c2w1vA_ not modelled 10.8 22 PDB header:hydrolase Chain: A: PDB Molecule:nitrilase homolog 2; PDBTitle: crystal structure of mouse nitrilase-2 at 1.4a resolution 44 d1uf5a_ not modelled 10.2 14 Fold:Carbon-nitrogen hydrolase Superfamily:Carbon-nitrogen hydrolase Family:Carbamilase 45 c3ezxA_ not modelled 9.8 17 PDB header:transferase Chain: A: PDB Molecule:monomethylamine corrinoid protein 1; PDBTitle: structure of methanosarcina barkeri monomethylamine2 corrinoid protein 46 c3hkxA_ not modelled 9.6 9 PDB header:hydrolase Chain: A: PDB Molecule:amidase; PDBTitle: crystal structure analysis of an amidase from nesterenkonia sp. 47 c3nrbD_ not modelled 9.4 41 PDB header:hydrolase Chain: D: PDB Molecule:formyltetrahydrofolate deformylase; PDBTitle: crystal structure of a formyltetrahydrofolate deformylase (puru,2 pp_1943) from pseudomonas putida kt2440 at 2.05 a resolution 48 c3n0vD_ not modelled 9.3 12 PDB header:hydrolase Chain: D: PDB Molecule:formyltetrahydrofolate deformylase; PDBTitle: crystal structure of a formyltetrahydrofolate deformylase (pp_0327)2 from pseudomonas putida kt2440 at 2.25 a resolution 49 c2eyuA_ not modelled 8.9 16 PDB header:protein transport Chain: A: PDB Molecule:twitching motility protein pilt; PDBTitle: the crystal structure of the c-terminal domain of aquifex2 aeolicus pilt 50 c3n05B_ not modelled 8.7 6 PDB header:ligase Chain: B: PDB Molecule:nh(3)-dependent nad(+) synthetase; PDBTitle: crystal structure of nh3-dependent nad+ synthetase from streptomyces2 avermitilis 51 c2p10D_ not modelled 8.5 15 PDB header:hydrolase Chain: D: PDB Molecule:mll9387 protein; PDBTitle: crystal structure of a putative phosphonopyruvate hydrolase (mll9387)2 from mesorhizobium loti maff303099 at 2.15 a resolution 52 c3o1lB_ not modelled 8.1 35 PDB header:hydrolase Chain: B: PDB Molecule:formyltetrahydrofolate deformylase; PDBTitle: crystal structure of a formyltetrahydrofolate deformylase (pspto_4314)2 from pseudomonas syringae pv. tomato str. dc3000 at 2.20 a resolution 53 c3obiC_ not modelled 8.1 18 PDB header:hydrolase Chain: C: PDB Molecule:formyltetrahydrofolate deformylase; PDBTitle: crystal structure of a formyltetrahydrofolate deformylase (np_949368)2 from rhodopseudomonas palustris cga009 at 1.95 a resolution 54 c2gzaB_ not modelled 8.1 16 PDB header:hydrolase Chain: B: PDB Molecule:type iv secretion system protein virb11; PDBTitle: crystal structure of the virb11 atpase from the brucella suis type iv2 secretion system in complex with sulphate 55 c3louB_ not modelled 7.9 18 PDB header:hydrolase Chain: B: PDB Molecule:formyltetrahydrofolate deformylase; PDBTitle: crystal structure of formyltetrahydrofolate deformylase (yp_105254.1)2 from burkholderia mallei atcc 23344 at 1.90 a resolution 56 d1p9ra_ not modelled 7.5 14 Fold:P-loop containing nucleoside triphosphate hydrolases Superfamily:P-loop containing nucleoside triphosphate hydrolases Family:RecA protein-like (ATPase-domain) 57 c1emsB_ not modelled 7.3 9 PDB header:antitumor protein Chain: B: PDB Molecule:nit-fragile histidine triad fusion protein; PDBTitle: crystal structure of the c. elegans nitfhit protein 58 c2dclB_ not modelled 7.1 15 PDB header:structural genomics, unknown function Chain: B: PDB Molecule:hypothetical upf0166 protein ph1503; PDBTitle: structure of ph1503 protein from pyrococcus horikoshii ot3 59 d1j31a_ not modelled 6.9 18 Fold:Carbon-nitrogen hydrolase Superfamily:Carbon-nitrogen hydrolase Family:Carbamilase 60 c3p9xB_ not modelled 6.9 18 PDB header:transferase Chain: B: PDB Molecule:phosphoribosylglycinamide formyltransferase; PDBTitle: crystal structure of phosphoribosylglycinamide formyltransferase from2 bacillus halodurans 61 c3q9cF_ not modelled 6.8 7 PDB header:hydrolase Chain: F: PDB Molecule:acetylpolyamine amidohydrolase; PDBTitle: crystal structure of h159a apah complexed with n8-acetylspermidine 62 d2odka1 not modelled 6.6 12 Fold:YefM-like Superfamily:YefM-like Family:YefM-like 63 d3bzka5 not modelled 6.4 33 Fold:Ribonuclease H-like motif Superfamily:Ribonuclease H-like Family:Tex RuvX-like domain-like 64 c3kxyB_ not modelled 6.4 13 PDB header:chaperone/transcription inhibitor Chain: B: PDB Molecule:exoenzyme s synthesis protein c; PDBTitle: crystal structure of the exsc-exse complex 65 d1fmfa_ not modelled 6.3 13 Fold:Flavodoxin-like Superfamily:Cobalamin (vitamin B12)-binding domain Family:Cobalamin (vitamin B12)-binding domain 66 d2fvta1 not modelled 6.3 6 Fold:MTH938-like Superfamily:MTH938-like Family:MTH938-like 67 d2eg6a1 not modelled 6.2 50 Fold:TIM beta/alpha-barrel Superfamily:Metallo-dependent hydrolases Family:Dihydroorotase 68 d1zgha2 not modelled 6.0 15 Fold:Formyltransferase Superfamily:Formyltransferase Family:Formyltransferase 69 c2odkD_ not modelled 5.9 11 PDB header:structural genomics, unknown function Chain: D: PDB Molecule:hypothetical protein; PDBTitle: putative prevent-host-death protein from nitrosomonas europaea 70 d1noya_ not modelled 5.9 12 Fold:Ribonuclease H-like motif Superfamily:Ribonuclease H-like Family:DnaQ-like 3'-5' exonuclease 71 d1ih7a1 not modelled 5.9 6 Fold:Ribonuclease H-like motif Superfamily:Ribonuclease H-like Family:DnaQ-like 3'-5' exonuclease 72 d1o51a_ not modelled 5.7 8 Fold:Ferredoxin-like Superfamily:GlnB-like Family:DUF190/COG1993 73 c3jzeC_ not modelled 5.6 50 PDB header:hydrolase Chain: C: PDB Molecule:dihydroorotase; PDBTitle: 1.8 angstrom resolution crystal structure of dihydroorotase (pyrc)2 from salmonella enterica subsp. enterica serovar typhimurium str. lt2 74 c2gszE_ not modelled 5.5 21 PDB header:protein transport Chain: E: PDB Molecule:twitching motility protein pilt; PDBTitle: structure of a. aeolicus pilt with 6 monomers per2 asymmetric unit 75 c3pnuA_ not modelled 5.4 67 PDB header:hydrolase Chain: A: PDB Molecule:dihydroorotase; PDBTitle: 2.4 angstrom crystal structure of dihydroorotase (pyrc) from2 campylobacter jejuni. 76 d1jkxa_ not modelled 5.2 29 Fold:Formyltransferase Superfamily:Formyltransferase Family:Formyltransferase 77 d1uf3a_ not modelled 5.2 17 Fold:Metallo-dependent phosphatases Superfamily:Metallo-dependent phosphatases Family:TT1561-like

Binding site prediction

Due to computational demand, binding site predictions are not run for batch jobs

If you want to predict binding sites, please manually submit your model of choice to 3DLigandSite

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
If you use the binding site predictions from 3DLigandSite, please also cite:
3DLigandSite: predicting ligand-binding sites using similar structures.
Wass MN, Kelley LA and Sternberg MJ Nucleic Acids Research 38, W469-73 (2010) [PubMed]
© Structural Bioinformatics Group Imperial College London Lawrence Kelley, Benjamin Jefferys Disclaimer Terms and Conditions	Component software Template detection: HHpred 1.51 Secondary structure prediction: Psi-pred 2.5 Disorder prediction: Disopred 2.4 Transmembrane prediction: Memsat_SVM Multi-template modelling and ab initio: Poing 1.0