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  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: c3ngoA_

Fold library idPDB HeaderMoleculeTitle
c3ngoA_PDB header: hydrolase/dnaChain: A: PDB Molecule: ccr4-not transcription complex subunit 6-like;PDBTitle: crystal structure of the human cnot6l nuclease domain in complex with2 poly(a) dna


Added to library: Sat Aug 28 21:45:03 2010
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence LPPRPWITLKERDILPSASFTVMCYNVLCDKYATRQLYGYCPSWALNWEYRKKGIMEEIVNCDADIISLQ
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Known secondary structure (DSSP)




SS









GGG

TTTTTTS
S

S
 .........80.........90.........100.........110.........120.........130.........140
Sequence EVETEQYFTLFLPALKERGYDGFFSPKSRAKIMSEQERKHVDGCAIFFKTEKFTLVQKHTVEFNQVAMAN
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Known secondary structure (DSSP) TTTTS
TTS



TTTT
 .........150.........160.........170.........180.........190.........200.........210
Sequence SDGSEAMLNRVMTKDNIGVAVVLEVHKELFKQLLIVANAHMHWDPEYSDVKLIQTMMFVSEVKNILEKAS
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Known secondary structure (DSSP)
SS
TTT



GGG





GGG

 .........220.........230.........240.........250.........260.........270.........280
Sequence IPLVLCADLNSLPDSGVVEYLSNGGVADNHKDFKELYNECLMNFSRITHGFQLKSAYENNLMPYTNYTFD
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Known secondary structure (DSSP)





TTSSS
TT
GGGTT

TT



S

TTTTTSSS
S
SS
 .........290.........300.........310.........320.........330.......
Sequence FKGVIDYIFYSKTHMNVLGVLGPLDPQWLVENNITGCPHPHIPSDHFSLLTQLELHP
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Known secondary structure (DSSP)


TTT



TT

SS
BTTB
SSB




Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction
Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960
 
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Michael Sternberg  
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