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  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: c2voaB_

Fold library idPDB HeaderMoleculeTitle
c2voaB_PDB header: lyaseChain: B: PDB Molecule: exodeoxyribonuclease iii;PDBTitle: structure of an ap endonuclease from archaeoglobus fulgidus


Added to library: Tue Mar 16 12:23:01 2010
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence MLKIATFNVNSIRSRLHIVIPWLKENKPDILCMQETKVENRKFPEADFHRIGYHVVFSGSKGRNGVAIAS
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Known secondary structure (DSSP)

S
GGGT

S




GGG

TTT
TT
 .........80.........90.........100.........110.........120.........130.........140
Sequence LEEPEDVSFGLDSEPKDEDRLIRAKIAGIDVINTYVPQGFKIDSEKYQYKLQWLERLYHYLQKTVDFRSF
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Known secondary structure (DSSP) SS

S
SSSS

GGGTT



S
TTS

TTS
 .........150.........160.........170.........180.........190.........200.........210
Sequence AVWCGDMNVAPEPIDVHSPDKLKNHVFHEDARRAYKKILELGFVDVLRKIHPNERIYTFYDYRVKGAIER
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Known secondary structure (DSSP)
S


SGGGBS
TTTTTT



TTT

TT



SB

TTSTTTTTT
 .........220.........230.........240.........250......
Sequence GLGWRGDAILATPPLAERCVDCYADIKPRLAEKPSDHLPLVAVFDV
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Known secondary structure (DSSP) T

B


TT

SSS

SB




Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction
Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960
 
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