Secondary structure and disorder prediction

		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60
Sequence		M	E	N	K	Y	S	R	L	Q	I	S	I	H	W	L	V	F	L	L	V	I	A	A	Y	C	A	M	E	F	R	G	F	F	P	R	S	D	R	P	L	I	N	M	I	H	V	S	C	G	I	S	I	L	V	L	M	V	V	R	L
Secondary structure
SS confidence
Disorder		?	?	?	?	?	?
Disorder confidence
		.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120
Sequence		L	L	R	L	K	Y	P	T	P	P	I	I	P	K	P	K	P	M	M	T	G	L	A	H	L	G	H	L	V	I	Y	L	L	F	I	A	L	P	V	I	G	L	V	M	M	Y	N	R	G	N	P	W	F	A	F	G	L	T	M	P
Secondary structure
SS confidence
Disorder										?	?	?	?	?	?	?	?
Disorder confidence
		.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.
Sequence		Y	A	S	E	A	N	F	E	R	V	D	S	L	K	S	W	H	E	T	L	A	N	L	G	Y	F	V	I	G	L	H	A	A	A	A	L	A	H	H	Y	F	W	K	D	N	T	L	L	R	M	M	P	R	K	R	S
Secondary structure
SS confidence
Disorder		?			?	?																																													?	?	?	?	?	?	?
Disorder confidence

Confidence Key
High(9)											Low (0)

?	Disordered
	Alpha helix
	Beta strand

Domain analysis

Hover over an aligned region to see model and summary info

Please note, only up to the top 20 hits are modelled to reduce computer load

Rank Aligned region

PDB 1kqf chain C Region: 3 - 176 Aligned: 157 Modelled: 174 Confidence: 99.9% Identity: 16% Fold: Heme-binding four-helical bundle Superfamily: Transmembrane di-heme cytochromes Family: Formate dehydrogenase N, cytochrome (gamma) subunit Phyre2 PDB 2qjk chain M Region: 15 - 158 Aligned: 137 Modelled: 144 Confidence: 95.5% Identity: 15% PDB header:electron transport Chain: M: PDB Molecule:cytochrome b; PDBTitle: crystal structure analysis of mutant rhodobacter2 sphaeroides bc1 with stigmatellin and antimycin Phyre2 PDB 3cx5 chain C domain 2 Region: 15 - 158 Aligned: 137 Modelled: 144 Confidence: 95.1% Identity: 16% Fold: Heme-binding four-helical bundle Superfamily: Transmembrane di-heme cytochromes Family: Cytochrome b of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) Phyre2 PDB 3cx5 chain N Region: 15 - 158 Aligned: 137 Modelled: 144 Confidence: 94.5% Identity: 16% PDB header:oxidoreductase Chain: N: PDB Molecule:cytochrome b; PDBTitle: structure of complex iii with bound cytochrome c in reduced2 state and definition of a minimal core interface for3 electron transfer. Phyre2 PDB 3cwb chain C Region: 15 - 158 Aligned: 135 Modelled: 144 Confidence: 94.0% Identity: 16% PDB header:oxidoreductase Chain: C: PDB Molecule:cytochrome b; PDBTitle: chicken cytochrome bc1 complex inhibited by an iodinated analogue of2 the polyketide crocacin-d Phyre2 PDB 2e74 chain A domain 1 Region: 15 - 158 Aligned: 137 Modelled: 144 Confidence: 92.7% Identity: 15% Fold: Heme-binding four-helical bundle Superfamily: Transmembrane di-heme cytochromes Family: Cytochrome b of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) Phyre2 PDB 1ppj chain C domain 2 Region: 15 - 158 Aligned: 135 Modelled: 144 Confidence: 91.8% Identity: 16% Fold: Heme-binding four-helical bundle Superfamily: Transmembrane di-heme cytochromes Family: Cytochrome b of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) Phyre2 PDB 1q90 chain B Region: 15 - 158 Aligned: 137 Modelled: 144 Confidence: 91.1% Identity: 15% Fold: Heme-binding four-helical bundle Superfamily: Transmembrane di-heme cytochromes Family: Cytochrome b of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) Phyre2 PDB 1bcc chain C domain 3 Region: 15 - 158 Aligned: 135 Modelled: 144 Confidence: 90.0% Identity: 16% Fold: Heme-binding four-helical bundle Superfamily: Transmembrane di-heme cytochromes Family: Cytochrome b of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) Phyre2 PDB 1y5i chain C domain 1 Region: 2 - 148 Aligned: 135 Modelled: 147 Confidence: 81.3% Identity: 11% Fold: Heme-binding four-helical bundle Superfamily: Respiratory nitrate reductase 1 gamma chain Family: Respiratory nitrate reductase 1 gamma chain Phyre2 PDB 2ftc chain Q Region: 166 - 176 Aligned: 11 Modelled: 11 Confidence: 23.0% Identity: 36% PDB header:ribosome Chain: Q: PDB Molecule:39s ribosomal protein l34, mitochondrial; PDBTitle: structural model for the large subunit of the mammalian mitochondrial2 ribosome Phyre2 PDB 1t33 chain A domain 1 Region: 154 - 171 Aligned: 18 Modelled: 18 Confidence: 15.8% Identity: 22% Fold: DNA/RNA-binding 3-helical bundle Superfamily: Homeodomain-like Family: Tetracyclin repressor-like, N-terminal domain Phyre2 PDB 2iec chain A domain 1 Region: 153 - 162 Aligned: 10 Modelled: 10 Confidence: 12.6% Identity: 20% Fold: MK0786-like Superfamily: MK0786-like Family: MK0786-like Phyre2 PDB 1m56 chain D Region: 2 - 29 Aligned: 28 Modelled: 28 Confidence: 10.5% Identity: 14% Fold: Single transmembrane helix Superfamily: Bacterial aa3 type cytochrome c oxidase subunit IV Family: Bacterial aa3 type cytochrome c oxidase subunit IV Phyre2 PDB 3nnr chain A Region: 154 - 171 Aligned: 18 Modelled: 18 Confidence: 10.4% Identity: 17% PDB header:transcription Chain: A: PDB Molecule:transcriptional regulator, tetr family; PDBTitle: crystal structure of a tetr-family transcriptional regulator2 (maqu_3571) from marinobacter aquaeolei vt8 at 2.49 a resolution Phyre2 PDB 2ogf chain D Region: 153 - 162 Aligned: 10 Modelled: 10 Confidence: 10.3% Identity: 30% PDB header:structural genomics, unknown function Chain: D: PDB Molecule:hypothetical protein mj0408; PDBTitle: crystal structure of protein mj0408 from methanococcus jannaschii,2 pfam duf372 Phyre2 PDB 2id6 chain A domain 1 Region: 154 - 171 Aligned: 18 Modelled: 18 Confidence: 10.2% Identity: 11% Fold: DNA/RNA-binding 3-helical bundle Superfamily: Homeodomain-like Family: Tetracyclin repressor-like, N-terminal domain Phyre2 PDB 2yvh chain A Region: 154 - 171 Aligned: 18 Modelled: 16 Confidence: 10.1% Identity: 22% PDB header:transcription/dna Chain: A: PDB Molecule:transcriptional regulator; PDBTitle: crystal structure of the operator-binding form of the multi-drug2 binding transcriptional repressor cgmr Phyre2 PDB 2rae chain A Region: 154 - 171 Aligned: 18 Modelled: 18 Confidence: 9.8% Identity: 11% PDB header:transcription Chain: A: PDB Molecule:transcriptional regulator, acrr family protein; PDBTitle: crystal structure of a tetr/acrr family transcriptional regulator from2 rhodococcus sp. rha1 Phyre2 PDB 2i52 chain A domain 1 Region: 153 - 162 Aligned: 10 Modelled: 10 Confidence: 9.7% Identity: 30% Fold: MK0786-like Superfamily: MK0786-like Family: MK0786-like Phyre2 1 d1kqfc_ 2 c2qjkM_ 3 d3cx5c2 4 c3cx5N_ 5 c3cwbC_ 6 d2e74a1 7 d1ppjc2 8 d1q90b_ 9 d1bccc3 10 d1y5ic1 11 c2ftcQ_ 12 d1t33a1 13 d2ieca1 14 d1m56d_ 15 c3nnrA_ 16 c2ogfD_ 17 d2id6a1 18 c2yvhA_ 19 c2raeA_ 20 d2i52a1 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67

Detailed template information

# Template Alignment Coverage 3D Model Confidence % i.d. Template Information

1 d1kqfc_ 99.9 16 Fold:Heme-binding four-helical bundle Superfamily:Transmembrane di-heme cytochromes Family:Formate dehydrogenase N, cytochrome (gamma) subunit 2 c2qjkM_ 95.5 15 PDB header:electron transport Chain: M: PDB Molecule:cytochrome b; PDBTitle: crystal structure analysis of mutant rhodobacter2 sphaeroides bc1 with stigmatellin and antimycin 3 d3cx5c2 95.1 16 Fold:Heme-binding four-helical bundle Superfamily:Transmembrane di-heme cytochromes Family:Cytochrome b of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) 4 c3cx5N_ 94.5 16 PDB header:oxidoreductase Chain: N: PDB Molecule:cytochrome b; PDBTitle: structure of complex iii with bound cytochrome c in reduced2 state and definition of a minimal core interface for3 electron transfer. 5 c3cwbC_ 94.0 16 PDB header:oxidoreductase Chain: C: PDB Molecule:cytochrome b; PDBTitle: chicken cytochrome bc1 complex inhibited by an iodinated analogue of2 the polyketide crocacin-d 6 d2e74a1 92.7 15 Fold:Heme-binding four-helical bundle Superfamily:Transmembrane di-heme cytochromes Family:Cytochrome b of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) 7 d1ppjc2 91.8 16 Fold:Heme-binding four-helical bundle Superfamily:Transmembrane di-heme cytochromes Family:Cytochrome b of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) 8 d1q90b_ 91.1 15 Fold:Heme-binding four-helical bundle Superfamily:Transmembrane di-heme cytochromes Family:Cytochrome b of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) 9 d1bccc3 90.0 16 Fold:Heme-binding four-helical bundle Superfamily:Transmembrane di-heme cytochromes Family:Cytochrome b of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) 10 d1y5ic1 81.3 11 Fold:Heme-binding four-helical bundle Superfamily:Respiratory nitrate reductase 1 gamma chain Family:Respiratory nitrate reductase 1 gamma chain 11 c2ftcQ_ 23.0 36 PDB header:ribosome Chain: Q: PDB Molecule:39s ribosomal protein l34, mitochondrial; PDBTitle: structural model for the large subunit of the mammalian mitochondrial2 ribosome 12 d1t33a1 15.8 22 Fold:DNA/RNA-binding 3-helical bundle Superfamily:Homeodomain-like Family:Tetracyclin repressor-like, N-terminal domain 13 d2ieca1 12.6 20 Fold:MK0786-like Superfamily:MK0786-like Family:MK0786-like 14 d1m56d_ 10.5 14 Fold:Single transmembrane helix Superfamily:Bacterial aa3 type cytochrome c oxidase subunit IV Family:Bacterial aa3 type cytochrome c oxidase subunit IV 15 c3nnrA_ 10.4 17 PDB header:transcription Chain: A: PDB Molecule:transcriptional regulator, tetr family; PDBTitle: crystal structure of a tetr-family transcriptional regulator2 (maqu_3571) from marinobacter aquaeolei vt8 at 2.49 a resolution 16 c2ogfD_ 10.3 30 PDB header:structural genomics, unknown function Chain: D: PDB Molecule:hypothetical protein mj0408; PDBTitle: crystal structure of protein mj0408 from methanococcus jannaschii,2 pfam duf372 17 d2id6a1 10.2 11 Fold:DNA/RNA-binding 3-helical bundle Superfamily:Homeodomain-like Family:Tetracyclin repressor-like, N-terminal domain 18 c2yvhA_ 10.1 22 PDB header:transcription/dna Chain: A: PDB Molecule:transcriptional regulator; PDBTitle: crystal structure of the operator-binding form of the multi-drug2 binding transcriptional repressor cgmr 19 c2raeA_ 9.8 11 PDB header:transcription Chain: A: PDB Molecule:transcriptional regulator, acrr family protein; PDBTitle: crystal structure of a tetr/acrr family transcriptional regulator from2 rhodococcus sp. rha1 20 d2i52a1 9.7 30 Fold:MK0786-like Superfamily:MK0786-like Family:MK0786-like 21 c1z0xA_ not modelled 9.6 17 PDB header:transcription Chain: A: PDB Molecule:transcriptional regulator, tetr family; PDBTitle: crystal structure of transcriptional regulator, tetr family from2 enterococcus faecalis v583 22 c2guhA_ not modelled 9.4 6 PDB header:transcription Chain: A: PDB Molecule:putative tetr-family transcriptional regulator; PDBTitle: crystal structure of the putative tetr-family transcriptional2 regulator from rhodococcus sp. rha1 23 d2d6ya1 not modelled 9.2 11 Fold:DNA/RNA-binding 3-helical bundle Superfamily:Homeodomain-like Family:Tetracyclin repressor-like, N-terminal domain 24 c2qibA_ not modelled 8.7 11 PDB header:transcription Chain: A: PDB Molecule:tetr-family transcriptional regulator; PDBTitle: crystal structure of tetr-family transcriptional regulator from2 streptomyces coelicolor 25 d2gfna1 not modelled 8.5 22 Fold:DNA/RNA-binding 3-helical bundle Superfamily:Homeodomain-like Family:Tetracyclin repressor-like, N-terminal domain 26 c2dg8D_ not modelled 8.4 11 PDB header:gene regulation Chain: D: PDB Molecule:putative tetr-family transcriptional regulatory protein; PDBTitle: crystal structure of the putative trasncriptional regulator sco75182 from streptomyces coelicolor a3(2) 27 d1z0xa1 not modelled 8.3 17 Fold:DNA/RNA-binding 3-helical bundle Superfamily:Homeodomain-like Family:Tetracyclin repressor-like, N-terminal domain 28 c2wgbB_ not modelled 7.7 11 PDB header:transcription Chain: B: PDB Molecule:tetr family transcriptional repressor lfrr; PDBTitle: crystal structure of the tetr-like transcriptional2 regulator lfrr from mycobacterium smegmatis 29 d1uf2c2 not modelled 7.6 33 Fold:Viral protein domain Superfamily:Viral protein domain Family:Top domain of virus capsid protein 30 d2g3ba1 not modelled 7.5 17 Fold:DNA/RNA-binding 3-helical bundle Superfamily:Homeodomain-like Family:Tetracyclin repressor-like, N-terminal domain 31 c2hxiA_ not modelled 7.5 22 PDB header:transcription Chain: A: PDB Molecule:putative transcriptional regulator; PDBTitle: structural genomics, the crystal structure of a putative2 transcriptional regulator from streptomyces coelicolor a3(2) 32 d2fx0a1 not modelled 7.5 17 Fold:DNA/RNA-binding 3-helical bundle Superfamily:Homeodomain-like Family:Tetracyclin repressor-like, N-terminal domain 33 d2vkea1 not modelled 7.3 22 Fold:DNA/RNA-binding 3-helical bundle Superfamily:Homeodomain-like Family:Tetracyclin repressor-like, N-terminal domain 34 c2fbqA_ not modelled 7.2 22 PDB header:transcription Chain: A: PDB Molecule:probable transcriptional regulator; PDBTitle: the crystal structure of transcriptional regulator pa3006 35 d2j7ja2 not modelled 7.1 10 Fold:beta-beta-alpha zinc fingers Superfamily:beta-beta-alpha zinc fingers Family:Classic zinc finger, C2H2 36 d2o7ta1 not modelled 7.1 11 Fold:DNA/RNA-binding 3-helical bundle Superfamily:Homeodomain-like Family:Tetracyclin repressor-like, N-terminal domain 37 d2hkua1 not modelled 6.7 14 Fold:DNA/RNA-binding 3-helical bundle Superfamily:Homeodomain-like Family:Tetracyclin repressor-like, N-terminal domain 38 d2id3a1 not modelled 6.6 0 Fold:DNA/RNA-binding 3-helical bundle Superfamily:Homeodomain-like Family:Tetracyclin repressor-like, N-terminal domain 39 c3fiwB_ not modelled 6.5 17 PDB header:transcription regulator Chain: B: PDB Molecule:putative tetr-family transcriptional regulator; PDBTitle: structure of sco0253, a tetr-family transcriptional regulator from2 streptomyces coelicolor 40 d1vi0a1 not modelled 6.3 11 Fold:DNA/RNA-binding 3-helical bundle Superfamily:Homeodomain-like Family:Tetracyclin repressor-like, N-terminal domain 41 d2g7ga1 not modelled 6.3 11 Fold:DNA/RNA-binding 3-helical bundle Superfamily:Homeodomain-like Family:Tetracyclin repressor-like, N-terminal domain 42 d2vkva1 not modelled 6.2 22 Fold:DNA/RNA-binding 3-helical bundle Superfamily:Homeodomain-like Family:Tetracyclin repressor-like, N-terminal domain 43 c2g7sA_ not modelled 6.2 22 PDB header:transcription Chain: A: PDB Molecule:transcriptional regulator, tetr family; PDBTitle: the crystal structure of transcriptional regulator, tetr family, from2 agrobacterium tumefaciens 44 d1v7ba1 not modelled 6.1 28 Fold:DNA/RNA-binding 3-helical bundle Superfamily:Homeodomain-like Family:Tetracyclin repressor-like, N-terminal domain 45 c3efdK_ not modelled 6.1 33 PDB header:immune system Chain: K: PDB Molecule:kcsa; PDBTitle: the crystal structure of the cytoplasmic domain of kcsa 46 c2id3A_ not modelled 6.1 0 PDB header:transcription Chain: A: PDB Molecule:putative transcriptional regulator; PDBTitle: crystal structure of transcriptional regulator sco5951 from2 streptomyces coelicolor a3(2) 47 d2i10a1 not modelled 6.1 11 Fold:DNA/RNA-binding 3-helical bundle Superfamily:Homeodomain-like Family:Tetracyclin repressor-like, N-terminal domain 48 d1qled_ not modelled 6.1 7 Fold:Single transmembrane helix Superfamily:Bacterial aa3 type cytochrome c oxidase subunit IV Family:Bacterial aa3 type cytochrome c oxidase subunit IV 49 c3c2bA_ not modelled 6.0 17 PDB header:transcription regulator Chain: A: PDB Molecule:transcriptional regulator, tetr family; PDBTitle: crystal structure of tetr transcriptional regulator from agrobacterium2 tumefaciens 50 d2axti1 not modelled 6.0 14 Fold:Single transmembrane helix Superfamily:Photosystem II reaction center protein I, PsbI Family:PsbI-like 51 c3rh2A_ not modelled 6.0 17 PDB header:dna binding protein Chain: A: PDB Molecule:hypothetical tetr-like transcriptional regulator; PDBTitle: crystal structure of a hypothetical tetr-like transcriptional2 regulator (sama_0099) from shewanella amazonensis sb2b at 2.42 a3 resolution 52 c2g3bB_ not modelled 5.9 17 PDB header:transcription Chain: B: PDB Molecule:putative tetr-family transcriptional regulator; PDBTitle: crystal structure of putative tetr-family transcriptional regulator2 from rhodococcus sp. 53 c3cwrA_ not modelled 5.9 6 PDB header:transcription regulator Chain: A: PDB Molecule:transcriptional regulator, tetr family; PDBTitle: crystal structure of transcriptional regulator of tetr2 family (yp_425770.1) from rhodospirillum rubrum atcc 111703 at 1.50 a resolution 54 c3bniA_ not modelled 5.9 6 PDB header:transcription regulator Chain: A: PDB Molecule:putative tetr-family transcriptional regulator; PDBTitle: crystal structure of tetr-family transcriptional regulator from2 streptomyces coelicolor 55 d2axtb1 not modelled 5.8 22 Fold:Photosystem II antenna protein-like Superfamily:Photosystem II antenna protein-like Family:Photosystem II antenna protein-like 56 d2axtc1 not modelled 5.8 22 Fold:Photosystem II antenna protein-like Superfamily:Photosystem II antenna protein-like Family:Photosystem II antenna protein-like 57 c2axtc_ not modelled 5.8 22 PDB header:electron transport Chain: C: PDB Molecule:photosystem ii cp43 protein; PDBTitle: crystal structure of photosystem ii from thermosynechococcus elongatus 58 c2d6yA_ not modelled 5.8 11 PDB header:gene regulation Chain: A: PDB Molecule:putative tetr family regulatory protein; PDBTitle: crystal structure of transcriptional factor sco4008 from streptomyces2 coelicolor a3(2) 59 c2zcxA_ not modelled 5.7 17 PDB header:transcription Chain: A: PDB Molecule:tetr-family transcriptional regulator; PDBTitle: crystal structure of tetr family transcriptional regulator2 sco7815 60 c2dg7A_ not modelled 5.5 11 PDB header:gene regulation Chain: A: PDB Molecule:putative transcriptional regulator; PDBTitle: crystal structure of the putative transcriptional regulator sco03372 from streptomyces coelicolor a3(2) 61 c2o7tA_ not modelled 5.4 11 PDB header:transcription Chain: A: PDB Molecule:transcriptional regulator; PDBTitle: crystal structure of a tetr family transcriptional regulator2 (ncgl1578, cgl1640) from corynebacterium glutamicum at 2.10 a3 resolution 62 d2g7sa1 not modelled 5.4 22 Fold:DNA/RNA-binding 3-helical bundle Superfamily:Homeodomain-like Family:Tetracyclin repressor-like, N-terminal domain 63 c1t33B_ not modelled 5.4 22 PDB header:transcription Chain: B: PDB Molecule:putative transcriptional repressor (tetr/acrr family); PDBTitle: structural genomics, the crystal structure of a putative2 transcriptional repressor (tetr/acrr family) from salmonella3 typhimurim lt2 64 d1pb6a1 not modelled 5.3 11 Fold:DNA/RNA-binding 3-helical bundle Superfamily:Homeodomain-like Family:Tetracyclin repressor-like, N-terminal domain 65 c3o60A_ not modelled 5.2 11 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:lin0861 protein; PDBTitle: the crystal structure of lin0861 from listeria innocua to 2.8a 66 c3egqB_ not modelled 5.2 17 PDB header:transcription Chain: B: PDB Molecule:tetr family transcriptional regulator; PDBTitle: crystal structure of a tetr-family transcriptional regulator (af_1817)2 from archaeoglobus fulgidus at 2.55 a resolution 67 d1jt6a1 not modelled 5.2 28 Fold:DNA/RNA-binding 3-helical bundle Superfamily:Homeodomain-like Family:Tetracyclin repressor-like, N-terminal domain

Binding site prediction

Due to computational demand, binding site predictions are not run for batch jobs

If you want to predict binding sites, please manually submit your model of choice to 3DLigandSite

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
If you use the binding site predictions from 3DLigandSite, please also cite:
3DLigandSite: predicting ligand-binding sites using similar structures.
Wass MN, Kelley LA and Sternberg MJ Nucleic Acids Research 38, W469-73 (2010) [PubMed]
© Structural Bioinformatics Group Imperial College London Lawrence Kelley, Benjamin Jefferys Disclaimer Terms and Conditions	Component software Template detection: HHpred 1.51 Secondary structure prediction: Psi-pred 2.5 Disorder prediction: Disopred 2.4 Transmembrane prediction: Memsat_SVM Multi-template modelling and ab initio: Poing 1.0