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Protein Homology/analogY Recognition Engine V 2.2 |
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Fold library id | Fold | Superfamily | Family |
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d1uf2c2 | Viral protein domain | Viral protein domain | Top domain of virus capsid protein |
Added to library: Tue Mar 16 14:08:47 2010 | |
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Links to external resources | |
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  | 1 | . | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 |
Sequence | S | E | P | I | E | P | C | K | L | F | R | S | V | A | G | Q | T | G | N | I | P | M | M | G | I | L | A | T | P | P | A | A | Q | Q | Q | P | F | F | V | A | E | R | R | R | I | L | F | G | I | R | S | N | A | A | I | P | A | G | A | Y | Q | F | V | V | P | A | W | A | S | V |
Predicted secondary structure | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | |||||||||||||||||||||||||||||||||||||||
SS confidence | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Known secondary structure (DSSP) | B | ![]() | ![]() | ![]() | ![]() | S | S | S | S | S | T | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | S | S | S | ![]() | ![]() | ![]() | ![]() | S | S | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | S | S | B | S | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | T | T | T | T | T |   | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 |
Sequence | L | S | V | T | G | A | Y | V | Y | F | T | N | S | F | F | G | T | I | I | A | G | V | T | A | T | A | T | A | A | D | A | A | T | T | F | T | V | P | T | D | A | N | N | L | P | V | Q | T | D | S | R | L | S | F | S | L | G | G | G | N | I | N | L | E | L | G | V | A | K | T |
Predicted secondary structure | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ||||||||||||||||||||||||||||||
SS confidence | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Known secondary structure (DSSP) | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | B | S | S | S | B | S | S | T | T | S | ![]() | ![]() | ![]() | ![]() | T | T | S | S | ![]() | ![]() | ![]() | S | S | S | ![]() | ![]() | ![]() | ![]() | G | G | G | S | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | S | S | B | S |   | . | . | . | . | . | . | . | . | . | 150 | . | . | . | ||||
Sequence | G | F | C | V | A | I | E | G | E | F | T | I | L | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Predicted secondary structure | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
SS confidence | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Known secondary structure (DSSP) | S | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() |
Download: | PDB structure | FASTA sequence |
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