PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c2d6yA_

Fold library id	PDB Header	Molecule	Title
c2d6yA_	PDB header: gene regulation	Chain: A: PDB Molecule: putative tetr family regulatory protein;	PDBTitle: crystal structure of transcriptional factor sco4008 from2 streptomyces coelicolor a3(2)

Links to external resources
Added to library: Tue Mar 16 12:13:16 2010

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence E A T K A R I F E A A V A E F A R H G I A G A R I D R I A A E A R A N K Q L I Y A Y Y G N K G E L F A S V L E K K X L D L A I S V P V D P D

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T T S
T
S S S
G G

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence D I E G W I D R L L D Y H A A H P E L L R L L F W E G X E Y G T A E L P H E A E R Q E H Y A R K V A A V R D G Q E R G V I T D A I P A P D L

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) G
T T T S
T T T T S S
S S

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . .

Sequence L F L L V A X A N W A V V V P Q X K R I L V G G G D A G T D G L R D S I K K A A R R I V D R

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

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Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	E	A	T	K	A	R	I	F	E	A	A	V	A	E	F	A	R	H	G	I	A	G	A	R	I	D	R	I	A	A	E	A	R	A	N	K	Q	L	I	Y	A	Y	Y	G	N	K	G	E	L	F	A	S	V	L	E	K	K	X	L	D	L	A	I	S	V	P	V	D	P	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																			T	T	T	S											T											S	S																				S				G	G
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	D	I	E	G	W	I	D	R	L	L	D	Y	H	A	A	H	P	E	L	L	R	L	L	F	W	E	G	X	E	Y	G	T	A	E	L	P	H	E	A	E	R	Q	E	H	Y	A	R	K	V	A	A	V	R	D	G	Q	E	R	G	V	I	T	D	A	I	P	A	P	D	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	G																T														T	T	S			T	T																					T	T	S	S			S	S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.
Sequence	L	F	L	L	V	A	X	A	N	W	A	V	V	V	P	Q	X	K	R	I	L	V	G	G	G	D	A	G	T	D	G	L	R	D	S	I	K	K	A	A	R	R	I	V	D	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																								S