PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c1t33B_

Fold library id	PDB Header	Molecule	Title
c1t33B_	PDB header: transcription	Chain: B: PDB Molecule: putative transcriptional repressor (tetr/acrr	PDBTitle: structural genomics, the crystal structure of a putative2 transcriptional repressor (tetr/acrr family) from3 salmonella typhimurim lt2

Links to external resources
Added to library: Tue Mar 16 12:18:31 2010

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence T T K G E Q A K S Q L I A A A L A Q F G E Y G L H A T T R D I A A L A G Q N I A A I T Y Y F G S K E D L Y L A C A Q W I A D F L G E K F R P

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
G G G S
T S
T T
S

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence H A E K A E R L F S Q P A P D R D A I R E L I L L A C K N M I M L L T Q E D T V N L S K F I S R E Q L S P T S A Y Q L V H E Q V I D P L H T

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T S S S
T T
G G G S
T

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence H L T R L V A A Y T G C D A N D T R M I L H T H A L L G E V L A F R L G K E T I L L R T G W P Q F D E E K A E L I Y Q T V T C H I D L I L H

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T
T T S T T
S S

. . . .

Sequence G L T Q

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

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Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	T	T	K	G	E	Q	A	K	S	Q	L	I	A	A	A	L	A	Q	F	G	E	Y	G	L	H	A	T	T	R	D	I	A	A	L	A	G	Q	N	I	A	A	I	T	Y	Y	F	G	S	K	E	D	L	Y	L	A	C	A	Q	W	I	A	D	F	L	G	E	K	F	R	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																							G	G	G	S										T	S		T							T		S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	H	A	E	K	A	E	R	L	F	S	Q	P	A	P	D	R	D	A	I	R	E	L	I	L	L	A	C	K	N	M	I	M	L	L	T	Q	E	D	T	V	N	L	S	K	F	I	S	R	E	Q	L	S	P	T	S	A	Y	Q	L	V	H	E	Q	V	I	D	P	L	H	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)									T	T	S	S	S																					T	T		G	G	G													S												T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	H	L	T	R	L	V	A	A	Y	T	G	C	D	A	N	D	T	R	M	I	L	H	T	H	A	L	L	G	E	V	L	A	F	R	L	G	K	E	T	I	L	L	R	T	G	W	P	Q	F	D	E	E	K	A	E	L	I	Y	Q	T	V	T	C	H	I	D	L	I	L	H
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)											T			T	T	S																				T									T		S	S
	.	.	.	.
Sequence	G	L	T	Q
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)