PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c3nnrA_

Fold library id	PDB Header	Molecule	Title
c3nnrA_	PDB header: transcription	Chain: A: PDB Molecule: transcriptional regulator, tetr family;	PDBTitle: crystal structure of a tetr-family transcriptional regulator2 (maqu_3571) from marinobacter aquaeolei vt8 at 2.49 a resolution

Links to external resources
Added to library: Sat Aug 28 17:54:40 2010

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence X K T R D K I L L S S L E L F N D K G E R N I T T N H I A A H L A I S P G N L Y Y H F R N K S D I I Y E I F Q E Y E K L V D Y Y L D I P E D

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
G G G
T
S S T
S S

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence R P I T L E D X T F Y L E S V F D G L W S Y R F F H R D L E Y L L D S D P R L R Q D Y R E F T N R C L A A I N R I F A K L A D A G I I Q P Q

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S
T S
T T S B

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . .

Sequence P E D L R S A X S L N V W L V I T N W X A F L K T A H L T E L K Q G I Y Q V L T L E V P Y L T P E Y R E R V L A L R E K Y R P

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T
S G G G G G G B
T T

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

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Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	X	K	T	R	D	K	I	L	L	S	S	L	E	L	F	N	D	K	G	E	R	N	I	T	T	N	H	I	A	A	H	L	A	I	S	P	G	N	L	Y	Y	H	F	R	N	K	S	D	I	I	Y	E	I	F	Q	E	Y	E	K	L	V	D	Y	Y	L	D	I	P	E	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																				G	G	G											T											S	S																				T				S	S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	R	P	I	T	L	E	D	X	T	F	Y	L	E	S	V	F	D	G	L	W	S	Y	R	F	F	H	R	D	L	E	Y	L	L	D	S	D	P	R	L	R	Q	D	Y	R	E	F	T	N	R	C	L	A	A	I	N	R	I	F	A	K	L	A	D	A	G	I	I	Q	P	Q
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S																					T						S																																				T	T	S	B
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.
Sequence	P	E	D	L	R	S	A	X	S	L	N	V	W	L	V	I	T	N	W	X	A	F	L	K	T	A	H	L	T	E	L	K	Q	G	I	Y	Q	V	L	T	L	E	V	P	Y	L	T	P	E	Y	R	E	R	V	L	A	L	R	E	K	Y	R	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																		T												S	G	G	G										G	G	G	B														T	T