Email l.a.kelley@imperial.ac.uk Description P77528 Date Thu Jan 5 12:30:18 GMT 2012 Unique Job ID 0050b119bee98158

Detailed template information

# Template Alignment Coverage 3D Model Confidence % i.d. Template Information

1 d1c52a_ 69.9 24 Fold:Cytochrome c Superfamily:Cytochrome c Family:monodomain cytochrome c 2 c3nufB_ 58.9 19 PDB header:transcription regulator Chain: B: PDB Molecule:prd-containing transcription regulator; PDBTitle: crystal structure of a prd-containing transcription regulator2 (lsei_2718) from lactobacillus casei atcc 334 at 1.38 a resolution 3 c2yumA_ 35.1 8 PDB header:transcription Chain: A: PDB Molecule:zinc finger zz-type-containing protein 3; PDBTitle: solution structure of the myb-like dna-binding domain of2 human zzz3 protein 4 d1vz0a1 30.3 17 Fold:DNA/RNA-binding 3-helical bundle Superfamily:KorB DNA-binding domain-like Family:KorB DNA-binding domain-like 5 d2es9a1 25.3 9 Fold:YoaC-like Superfamily:YoaC-like Family:YoaC-like 6 c2cjjA_ 25.3 20 PDB header:dna-binding protein Chain: A: PDB Molecule:radialis; PDBTitle: crystal structure of the myb domain of the rad2 transcription factor from antirrhinum majus 7 d2cjja1 25.3 20 Fold:DNA/RNA-binding 3-helical bundle Superfamily:Homeodomain-like Family:Myb/SANT domain 8 d1m98a1 18.6 20 Fold:Orange carotenoid protein, N-terminal domain Superfamily:Orange carotenoid protein, N-terminal domain Family:Orange carotenoid protein, N-terminal domain 9 d1h99a1 17.2 14 Fold:PTS-regulatory domain, PRD Superfamily:PTS-regulatory domain, PRD Family:PTS-regulatory domain, PRD 10 c2l66B_ 15.5 40 PDB header:transcription regulator Chain: B: PDB Molecule:transcriptional regulator, abrb family; PDBTitle: the dna-recognition fold of sso7c4 suggests a new member of spovt-abrb2 superfamily from archaea. 11 c3nzlA_ 14.0 16 PDB header:transcription Chain: A: PDB Molecule:dna-binding protein satb1; PDBTitle: crystal structure of the n-terminal domain of dna-binding protein2 satb1 from homo sapiens, northeast structural genomics consortium3 target hr4435b 12 c1zx4B_ 13.8 13 PDB header:translation Chain: B: PDB Molecule:plasmid partition par b protein; PDBTitle: structure of parb bound to dna 13 c1m98A_ 12.9 20 PDB header:unknown function Chain: A: PDB Molecule:orange carotenoid protein; PDBTitle: crystal structure of orange carotenoid protein 14 d1h99a2 11.4 8 Fold:PTS-regulatory domain, PRD Superfamily:PTS-regulatory domain, PRD Family:PTS-regulatory domain, PRD 15 d1up8a_ 11.0 23 Fold:Acid phosphatase/Vanadium-dependent haloperoxidase Superfamily:Acid phosphatase/Vanadium-dependent haloperoxidase Family:Haloperoxidase (bromoperoxidase) 16 d2dsya1 10.7 26 Fold:TTHA1013/TTHA0281-like Superfamily:TTHA1013/TTHA0281-like Family:TTHA0281-like 17 d2b7ma1 10.2 17 Fold:alpha-alpha superhelix Superfamily:Cullin repeat-like Family:Exocyst complex component 18 c3gwhB_ 9.5 21 PDB header:transcription Chain: B: PDB Molecule:transcriptional antiterminator (bglg family); PDBTitle: crystallographic ab initio protein solution far below atomic2 resolution 19 d1hwxa2 9.2 19 Fold:Aminoacid dehydrogenase-like, N-terminal domain Superfamily:Aminoacid dehydrogenase-like, N-terminal domain Family:Aminoacid dehydrogenases 20 c2wj8N_ 8.8 19 PDB header:rna binding protein/rna Chain: N: PDB Molecule:nucleoprotein; PDBTitle: respiratory syncitial virus ribonucleoprotein 21 d1ufza_ not modelled 8.8 15 Fold:RuvA C-terminal domain-like Superfamily:HBS1-like domain Family:HBS1-like domain 22 d1ddba_ not modelled 8.7 19 Fold:Toxins' membrane translocation domains Superfamily:Bcl-2 inhibitors of programmed cell death Family:Bcl-2 inhibitors of programmed cell death 23 d2gmya1 not modelled 8.7 23 Fold:AhpD-like Superfamily:AhpD-like Family:Atu0492-like 24 d1b5qa2 not modelled 8.0 18 Fold:FAD-linked reductases, C-terminal domain Superfamily:FAD-linked reductases, C-terminal domain Family:L-aminoacid/polyamine oxidase 25 c2wvmA_ not modelled 7.8 32 PDB header:transferase Chain: A: PDB Molecule:mannosyl-3-phosphoglycerate synthase; PDBTitle: h309a mutant of mannosyl-3-phosphoglycerate synthase from2 thermus thermophilus hb27 in complex with3 gdp-alpha-d-mannose and mg(ii) 26 d1toha_ not modelled 7.6 21 Fold:Aromatic aminoacid monoxygenases, catalytic and oligomerization domains Superfamily:Aromatic aminoacid monoxygenases, catalytic and oligomerization domains Family:Aromatic aminoacid monoxygenases, catalytic and oligomerization domains 27 c3gocB_ not modelled 7.5 21 PDB header:hydrolase Chain: B: PDB Molecule:endonuclease v; PDBTitle: crystal structure of the endonuclease v (sav1684) from streptomyces2 avermitilis. northeast structural genomics consortium target svr196 28 c2zu8A_ not modelled 7.2 23 PDB header:transferase Chain: A: PDB Molecule:mannosyl-3-phosphoglycerate synthase; PDBTitle: crystal structure of mannosyl-3-phosphoglycerate synthase2 from pyrococcus horikoshii 29 d2v5za2 not modelled 7.2 18 Fold:FAD-linked reductases, C-terminal domain Superfamily:FAD-linked reductases, C-terminal domain Family:L-aminoacid/polyamine oxidase 30 d1j8ua_ not modelled 7.1 18 Fold:Aromatic aminoacid monoxygenases, catalytic and oligomerization domains Superfamily:Aromatic aminoacid monoxygenases, catalytic and oligomerization domains Family:Aromatic aminoacid monoxygenases, catalytic and oligomerization domains 31 d1phza2 not modelled 6.9 18 Fold:Aromatic aminoacid monoxygenases, catalytic and oligomerization domains Superfamily:Aromatic aminoacid monoxygenases, catalytic and oligomerization domains Family:Aromatic aminoacid monoxygenases, catalytic and oligomerization domains 32 d1l1fa2 not modelled 6.8 22 Fold:Aminoacid dehydrogenase-like, N-terminal domain Superfamily:Aminoacid dehydrogenase-like, N-terminal domain Family:Aminoacid dehydrogenases 33 d2fhzb1 not modelled 6.7 5 Fold:Colicin D/E5 nuclease domain Superfamily:Colicin D/E5 nuclease domain Family:Colicin E5 nuclease domain 34 d1mlwa_ not modelled 6.6 18 Fold:Aromatic aminoacid monoxygenases, catalytic and oligomerization domains Superfamily:Aromatic aminoacid monoxygenases, catalytic and oligomerization domains Family:Aromatic aminoacid monoxygenases, catalytic and oligomerization domains 35 d1ppjb2 not modelled 6.6 11 Fold:LuxS/MPP-like metallohydrolase Superfamily:LuxS/MPP-like metallohydrolase Family:MPP-like 36 d1dgsa2 not modelled 6.4 50 Fold:OB-fold Superfamily:Nucleic acid-binding proteins Family:DNA ligase/mRNA capping enzyme postcatalytic domain 37 c1uixA_ not modelled 6.4 67 PDB header:transferase Chain: A: PDB Molecule:rho-associated kinase; PDBTitle: coiled-coil structure of the rhoa-binding domain in rho-2 kinase 38 c3bboW_ not modelled 6.4 33 PDB header:ribosome Chain: W: PDB Molecule:ribosomal protein l24; PDBTitle: homology model for the spinach chloroplast 50s subunit2 fitted to 9.4a cryo-em map of the 70s chlororibosome 39 d1szaa_ not modelled 6.3 13 Fold:alpha-alpha superhelix Superfamily:ENTH/VHS domain Family:RPR domain (SMART 00582 ) 40 d1tjla2 not modelled 6.2 16 Fold:Glucocorticoid receptor-like (DNA-binding domain) Superfamily:Glucocorticoid receptor-like (DNA-binding domain) Family:Prokaryotic DksA/TraR C4-type zinc finger 41 c3jroA_ not modelled 6.1 20 PDB header:transport protein, structural protein Chain: A: PDB Molecule:fusion protein of protein transport protein sec13 PDBTitle: nup84-nup145c-sec13 edge element of the npc lattice 42 c1s1cY_ not modelled 6.1 67 PDB header:signaling protein Chain: Y: PDB Molecule:rho-associated, coiled-coil containing protein PDBTitle: crystal structure of the complex between the human rhoa and2 rho-binding domain of human rocki 43 c2d3jA_ not modelled 6.0 19 PDB header:signaling protein inhibitor Chain: A: PDB Molecule:wnt inhibitory factor-1; PDBTitle: nmr structure of the wif domain from human wif-1 44 c2vo4A_ not modelled 5.9 13 PDB header:transferase Chain: A: PDB Molecule:2,4-d inducible glutathione s-transferase; PDBTitle: glutathione transferase from glycine max 45 c2phmA_ not modelled 5.8 18 PDB header:oxidoreductase Chain: A: PDB Molecule:protein (phenylalanine-4-hydroxylase); PDBTitle: structure of phenylalanine hydroxylase dephosphorylated 46 d2fzva1 not modelled 5.7 17 Fold:Flavodoxin-like Superfamily:Flavoproteins Family:NADPH-dependent FMN reductase 47 d1b8za_ not modelled 5.6 13 Fold:IHF-like DNA-binding proteins Superfamily:IHF-like DNA-binding proteins Family:Prokaryotic DNA-bending protein 48 c3hahA_ not modelled 5.5 18 PDB header:endocytosis Chain: A: PDB Molecule:human pacsin1 f-bar; PDBTitle: crystal structure of human pacsin1 f-bar domain (c2 lattice) 49 c3bg1F_ not modelled 5.4 20 PDB header:protein transport, hydrolase Chain: F: PDB Molecule:nucleoporin nup145; PDBTitle: architecture of a coat for the nuclear pore membrane 50 c2p1iA_ not modelled 5.3 25 PDB header:oxidoreductase Chain: A: PDB Molecule:ribonucleotide reductase, small chain; PDBTitle: plasmodium yoelii ribonucleotide reductase subunit r2 (py03671) 51 d1bgva2 not modelled 5.3 22 Fold:Aminoacid dehydrogenase-like, N-terminal domain Superfamily:Aminoacid dehydrogenase-like, N-terminal domain Family:Aminoacid dehydrogenases 52 d1oyja1 not modelled 5.3 15 Fold:GST C-terminal domain-like Superfamily:GST C-terminal domain-like Family:Glutathione S-transferase (GST), C-terminal domain