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  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: c2wj8N_

Fold library idPDB HeaderMoleculeTitle
c2wj8N_PDB header: rna binding protein/rnaChain: N: PDB Molecule: nucleoprotein;PDBTitle: respiratory syncitial virus ribonucleoprotein


Added to library: Sat Aug 28 16:25:17 2010
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence ALSKVKLNDTLNKDQLLSSSKYTIQRSTGDSIDTPNYDVQKHINKLCGMLLITEDANHKFTGLIGMLYAM
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Known secondary structure (DSSP)
TTS



T
S





S


GGGSTT

TTS
 .........80.........90.........100.........110.........120.........130.........140
Sequence SRLGREDTIKILRDAGYHVKANGVDVTTHRQDINGKEMKFEVLTLASLTTEIQINIEIESRKSYKKMLKE
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Known secondary structure (DSSP)
T



TT

SSS
 .........150.........160.........170.........180.........190.........200.........210
Sequence MGEVAPEYRHDSPDCGMIILCIAALVITKLAAGDRSGLTAVIRRANNVLKNEMKRYKGLLPKDIANSFYE
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Known secondary structure (DSSP) SS

TTTSTT
TTGGG
SSTTTT
TT

 .........220.........230.........240.........250.........260.........270.........280
Sequence VFEKHPHFIDVFVHFGIAQSSTRGGSRVEGIFAGLFMNAYGAGQVMLRWGVLAKSVKNIMLGHASVQAEM
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Known secondary structure (DSSP)
TTSS


TTTTTT
TT
GGGGS
 .........290.........300.........310.........320.........330.........340.........350
Sequence EQVVEVYEYAQKLGGEAGFYHILNNPKASLLSLTQFPHFSSVVLGNAAGLGIMGEYRGTPRNQDLYDAAK
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Known secondary structure (DSSP) GGGGGGTTTTT
GGGGGG
STT
TT

SS




S
 .........360.........370........
Sequence AYAEQLKENGVINYSVLDLTAEELEAIK
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Known secondary structure (DSSP) TT




TTSS


S



Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction
Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960
 
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Michael Sternberg  
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