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  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: c3bg1F_

Fold library idPDB HeaderMoleculeTitle
c3bg1F_PDB header: protein transport, hydrolaseChain: F: PDB Molecule: nucleoporin nup145;PDBTitle: architecture of a coat for the nuclear pore membrane


Added to library: Tue Mar 16 13:58:43 2010
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence DEIDNAKLIMKERRFTASYTFAKFSTGSMLLTKDIVGKSGVSIKRLPTELQRKFLFDDVYLDKEIEKVTI
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TTT

TT




B
TTS
B
B

S
STTS
B









GGGGST
 .........80.........90.........100.........110.........120.........130.........140
Sequence EARKSNPYPQISESSLLFKDALDYMEKTSSDYNLWKLSSILFDPVSYPYKTDNDQVKMALLKKERHCRLT
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 .........150.........160.........170.........180.........190.........200.........210
Sequence SWIVSQIGPEIEEKIRNSSNEIEQIFLYLLLNDVVRASKLAIESKNGHLSVLISYLGSNDPRIRDLAELQ
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Known secondary structure (DSSP) ST
S
TTT
TT
TS

 .........220.........230.........240.........250.........260.........270.........280
Sequence LQKWSTGGCSIDKNISKIYKLLSGSPFEGLFSLKELESEFSWLCLLNLTLCYGQIDEYSLESLVQSHLDK
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Known secondary structure (DSSP) TTSS

S

S
STTSTT
SGGGGGTS
T


SS

 .........290.........300.........310.........320.........330.........340.........350
Sequence FSLPYDDPIGVIFQLYAANENTEKLYKEVRQRTNALDVQFCWYLIQTLRFNGTRVFSKETSDEATFAFAA
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Known secondary structure (DSSP) S


TT
S
TTTT
S
S
TTS
S


 .........360.........370.........380.........390.........400.........410.........420
Sequence QLEFAQLHGHSLFVSCFLNDDKAAEDTIKRLVMREITLLRASTNDHILNRLKIPSQLIFNAQALKDRYEG
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Known secondary structure (DSSP) T

TT


STGGGSTTTTS
TT

 ...
Sequence NYL
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Known secondary structure (DSSP)


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction
Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960
 
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Michael Sternberg  
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