Fold library entry viewer: d1up8a_

Added to library: Tue Mar 16 13:04:50 2010
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	G	I	P	A	D	N	L	Q	S	R	A	K	A	S	F	D	T	R	V	A	A	A	E	L	A	L	N	R	G	V	V	P	S	F	A	N	G	E	E	L	L	Y	R	N	P	D	P	D	N	T	D	P	S	F	I	A	S	F	T	K	G	L	P	H	D	D	N	G	A	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																												T									S					S	B			S	T	T				B			T	T	B			T	T	S		B		T	T	S		B
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	I	D	P	D	D	F	L	A	F	V	R	A	I	N	S	G	D	E	K	E	I	A	D	L	T	L	G	P	A	R	D	P	E	T	G	L	P	I	W	R	S	D	L	A	N	S	L	E	L	E	V	R	G	W	E	N	S	S	A	G	L	T	F	D	L	E	G	P	D	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S																						T	S			S	S		B		T	T	T			B			S	S							T			B				S		T	T	G	G	G				S	S	S	S		T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	Q	S	I	A	M	P	P	A	P	V	L	T	S	P	E	L	V	A	E	I	A	E	L	Y	L	M	A	L	G	R	E	I	E	F	S	E	F	D	S	P	K	N	A	E	Y	I	Q	F	A	I	D	Q	L	N	G	L	E	W	F	N	T	P	A	K	L	G	D	P	P	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	S	S								T	T	S																T	T	T		B	G	G	G	T	T		G	G	G													T	S					S				T	T	S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	E	I	R	R	R	R	G	E	V	T	V	G	N	L	F	R	G	I	L	P	G	S	E	V	G	P	Y	L	S	Q	Y	I	I	V	G	S	K	Q	I	G	S	A	T	V	G	N	K	T	L	V	S	P	N	A	A	D	E	F	D	G	E	I	A	Y	G	S	I	T	I	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)											T	T	T	T	T				S	T	T	T	T	S	S		S	S		G	G	G	T						T	T					T	T						T	T	G	G	G	G	G	G	T					T	T
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	Q	R	V	R	I	A	T	P	G	R	D	F	M	T	D	L	K	V	F	L	D	V	Q	D	A	A	D	F	R	G	F	E	S	Y	E	P	G	A	R	L	I	R	T	I	R	D	L	A	T	W	V	H	F	D	A	L	Y	E	A	Y	L	N	A	C	L	I	L	L	A	N
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)								T	T			B			S									T	T	B			T	T										S			B													T	T													T
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	G	V	P	F	D	P	N	L	P	F	Q	Q	E	D	K	L	D	N	Q	D	V	F	V	N	F	G	S	A	H	V	L	S	L	V	T	E	V	A	T	R	A	L	K	A	V	R	Y	Q	K	F	N	I	H	R	R	L	R	P	E	A	T	G	G	L	I	S	V	N	K	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T			B		T	T	S	T	T		S						S				B	T	T	B	S																									T	T	T		B
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	A	A	Q	K	G	E	S	I	F	P	E	V	D	L	A	V	E	E	L	G	D	I	L	E	K	A	E	I	S	N	R	K	Q	N	I	A	D	G	D	P	D	P	D	P	S	F	L	L	P	M	A	F	A	E	G	S	P	F	H	P	S	Y	G	S	G	H	A	V	V	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				T	T					G	G	G																									T	T		S	S									B	S	S	T	T		S		S	S		S	S	S
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	G	A	C	V	T	I	L	K	A	F	F	D	S	G	I	E	I	D	Q	V	F	E	V	D	K	D	E	D	K	L	V	K	S	S	F	K	G	T	L	T	V	A	G	E	L	N	K	L	A	D	N	I	A	I	G	R	N	M	A	G	V	H	Y	F	S	D	Q	F	E	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)											B	T	T	T		B		S							S	S	S	S	S								S			B																				T	S
	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.
Sequence	L	L	L	G	E	Q	V	A	I	G	I	L	E	E	Q	S	L	T	Y	G	E	N	F	F	F	N	L	P	K	F	D	G	T	T	I	Q	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																G	G	G			S									T	T	S

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PDB structure

FASTA sequence

Hidden Markov model

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