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 Protein Homology/analogY Recognition Engine V 2.0


 

New fold library entries added 2023 Feb 18

Fold library idPDB HeaderMoleculeTitle
c7r3aC_ 2.53 hydrolase Chain: C: s-inosyl-l-homocysteine hydrolase;
c8adcA_ 1.70 hydrolase Chain: A: viral deubiquitinating enzyme;
c8h70A_ 1.88 membrane protein Chain: A: phosphate regulon sensor protein phor;
c7uil5_ 4.30 transcription Chain: 5: mediator of rna polymerase ii transcription subunit 15;
c7yhlB_ 2.70 hydrolase Chain: B: crispr system ring nuclease sso2081;
c7uk7A_ 1.95 ligase Chain: A: putative acid--amine ligase yjfc;
c7uyyB_ 2.70 oxidoreductase Chain: B: aldehyde dehydrogenase;
c8dolC_ 2.80 transport protein Chain: C: cag pathogenicity island protein (cag5);
c8auwB_ UNK Blank PDB header PDB COMPND:
c7yojA_ 3.36 rna binding protein/dna/rna Chain: A: caspi;
c7txyC_ 1.75 oxidoreductase Chain: C: 2-amino-5-chlorophenol 1,6-dioxygenase subunit alpha;
c7qzjA_ 1.55 biosynthetic protein Chain: A: aspartate aminotransferase family protein;
c8aj7B_ 1.60 toxin Chain: B: kunitz domain of amblyomin-x;
c7xreC_ 2.76 oxidoreductase Chain: C: dgpa;
c7t7uA_ 1.80 photosynthesis Chain: A: phycoerythrin alpha subunit l1;
c7ui9M_ UNK Blank PDB header PDB COMPND:
c8a6tC_ 3.10 electron transport Chain: C: electron bifurcating hydrogenase subunit hydc;
c7yovB_ 3.25 virus Chain: B: ndv p protein;
c5sbjC_ 1.28 de novo protein Chain: C: metp, miniaturized rubredoxin;
c8cuyB_ 2.40 biosynthetic protein Chain: B: polyketide synthase pks13;
c7uile_ 4.30 transcription Chain: E:
c7youA_ 3.41 virus Chain: A: rna-directed rna polymerase l;
c7v3nA_ 1.85 oxidoreductase Chain: A: dioxygenase;
c8e2kA_ UNK Blank PDB header PDB COMPND:
c7vsrM_ 4.50 dna binding protein Chain: M: protein mcrc;
c7uo6A_ UNK signaling protein Chain: A: pheromone binding protein 2;
c7r2xA_ 3.35 lyase Chain: A: mannuronic acid specific lyase;
c7uc8J_ 2.90 cell invasion Chain: J: 230as-73;
c8fhnC_ 3.00 membrane protein Chain: C: solute carrier family 12 member 2,solute carrier family 12
c8e2eB_ UNK Blank PDB header PDB COMPND:
c8hpjA_ 3.30 transport protein/immune system Chain: A: oxalate:formate antiporter;
c7uilc_ 4.30 transcription Chain: C:
c7vs3A_ 2.60 exocytosis Chain: A: calcium-dependent secretion activator 1;
c7r1mB_ 1.64 structural protein Chain: B: exosporium protein;
c7r38A_ 2.05 hydrolase Chain: A: adenosylhomocysteinase;
c7ydwC_ 2.47 dna binding protein Chain: C: mpn domain-containing protein;
c8g1yA_ 1.43 lyase Chain: A: threonine synthase;
c8g0uC_ 1.90 ligase Chain: C: acetyl-coenzyme a synthetase;
c7r39B_ 2.50 hydrolase Chain: B: adenosylhomocysteinase;
c7uk8A_ 1.85 ligase Chain: A: putative acid--amine ligase ygic;
c7t8sD_ 2.00 photosynthesis Chain: D: phycoerythrin alpha-2 subunit;
c5sbiC_ 1.80 de novo protein Chain: C: metp, miniaturized rubredoxin;
c8bewA_ 3.49 electron transport Chain: A: electron bifurcating hydrogenase subunit hyda1;
c7q4wB_ 3.78 electron transport Chain: B: iron hydrogenase hydb;
c8as5A_ 2.50 chaperone Chain: A: nucleophosmin;
c8a6tB_ 3.10 electron transport Chain: B: electron bifurcating hydrogenase subunit hydb;
c7tymB_ 3.40 signaling protein Chain: B: insulin receptor-related protein;
c7yqaD_ 1.85 lyase Chain: D: d-threonine aldolase;
c8bw6A_ 1.95 structural protein Chain: A: titin;
c8dwkD_ 2.50 hydrolase Chain: D: e3 ubiquitin-protein ligase ppp1r11;
c8dfoI_ 3.10 rna binding protein/rna Chain: I: crispr-associated protein, ct1133 family;
c7ww0B_ 1.85 biosynthetic protein Chain: B: methyltransf_2 domain-containing protein;
c7uifC_ UNK Blank PDB header PDB COMPND:
c7uiln_ 4.30 transcription Chain: N:
c8amqA_ 1.60 oxidoreductase Chain: A: probable ferredoxin,putative cytochrome p450 143;
c7yotD_ 3.00 virus Chain: D: ndv p protein;
c8bxrA_ 2.70 structural protein Chain: A: titin;
c8a3vD_ 2.90 replication Chain: D: duf721 domain-containing protein;
c7t8sF_ 2.00 photosynthesis Chain: F: phycoerythrin alpha-1 subunit;
c7txyF_ 1.75 oxidoreductase Chain: F: 2-aminophenol 1,6-dioxygenase subunit beta;
c7uifQ_ UNK Blank PDB header PDB COMPND:
c7uil1_ 4.30 transcription Chain: 1: mediator of rna polymerase ii transcription subunit 2;
c8dajA_ 1.20 biosynthetic protein Chain: A: esterase, phb depolymerase family;
c8cv1A_ 2.60 biosynthetic protein Chain: A: polyketide synthase pks13;
c7uifA_ UNK Blank PDB header PDB COMPND:
c5sbgC_ 1.34 de novo protein Chain: C: metp, miniaturized rubredoxin;
c7xvrB_ 2.40 viral protein Chain: B: neuraminidase;
c8hd4A_ 2.68 biosynthetic protein Chain: A: long-chain-fatty-acid--amp ligase fadd23;
c7tpuA_ 2.19 hydrolase Chain: A: beta-lactamase domain-containing protein;
c7qzwA_ UNK antimicrobial protein Chain: A: hm-amp8;
c7uilp_ 4.30 transcription Chain: P:
c7q4wA_ 3.78 electron transport Chain: A: iron hydrogenase hyda;
c7r1lC_ 1.45 sugar binding protein Chain: C: spore coat assembly protein safa;
c8e2fA_ 2.47 ligase Chain: A: baculoviral iap repeat-containing protein 6;
c8b0qA_ 1.80 dna binding protein Chain: A: uvrabc system protein c;
c7wupB_ 2.30 biosynthetic protein Chain: B: apii;
c7xv3R_ 2.76 membrane protein Chain: R: probable g-protein coupled receptor 174;
c8dfoM_ 3.10 rna binding protein/rna Chain: M: acric4;
c7urvD_ 3.05 protein binding Chain: D: fmc63 single-chain variable fragment;
c7q4wC_ 3.78 electron transport Chain: C: iron hydrogenase hydc;
c7ww4A_ 2.23 hydrolase Chain: A: beta-1,3(4)-glucanase;
c8auwA_ UNK Blank PDB header PDB COMPND:
c8dd7B_ 3.30 circadian clock protein Chain: B: protein timeless,methylated-dna--protein-cysteine
c8dwlD_ 2.00 hydrolase Chain: D: e3 ubiquitin-protein ligase ppp1r11;
c8dwlB_ 2.00 hydrolase Chain: B: e3 ubiquitin-protein ligase ppp1r11;
c8ampA_ 2.00 electron transport Chain: A: possible ferredoxin;
c7yotE_ 3.00 virus Chain: E: ndv p protein;
c7y9pA_ 2.80 oxidoreductase Chain: A: xylitol dehydrogenase;
c7ui9C_ UNK Blank PDB header PDB COMPND:
c8fhoC_ 2.95 membrane protein Chain: C: solute carrier family 12 member 2,solute carrier family 12
c7yovE_ 3.25 virus Chain: E: ndv p protein;
c8dwkC_ 2.50 hydrolase Chain: C: e3 ubiquitin-protein ligase ppp1r11;
c7ug2A_ 2.05 ligase Chain: A: tripartite motif-containing protein 75;
c8addA_ 1.90 hydrolase Chain: A: atp-dependent dna helicase;
c7tmwR_ 3.20 membrane protein Chain: R: relaxin receptor 1, guanine nucleotide-binding protein g(s)
c7zh5A_ 3.30 viral protein Chain: A: spike glycoprotein,fibritin;


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Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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