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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c8auwA_

Fold library idPDB HeaderMoleculeTitle
c8auwA_UNKPDB header: Blank PDB headerPDB COMPND:


Added to library: Sat Feb 18 09:04:44 2023 c8auwA_
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence EWLVLRDGCMHCDADGLHSLSYHPALNAILAVTSRGTIKVIDGTSGATLQASALSAKPGGQVKCQYISAV
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Known secondary structure (DSSP)




SS


TTTTTTS
TTT


TT

TT


TTT
 .........80.........90.........100.........110.........120.........130.........140
Sequence DKVIFVDDYAVGCRKDLNGILLLDTALQTPVSKQDDVVQLELPVTEAQQLLSACLEKVDISSTEGYDLFI
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Known secondary structure (DSSP) T
SS

TT

TTTT



SSTTS
T


TTSTT
 .........150.........160.........170.........180.........190.........200.........210
Sequence TQLKDGLKNTSHETAANHKVAKWATVTFHLPHHVLKSIASAIVNELKKINQNVAALPVASSVMDRLSYLL
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Known secondary structure (DSSP)


TT


T
 .........220.........230.........240.........250.........260.........270.........280
Sequence PSARPELGVGPGRSVDRSLMYSEANRRETFTSWPHVGYRWAQPDPMAQAGFYHQPASSGDDRAMCFTCSV
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Known secondary structure (DSSP) TTS





STT



TSGGGG
TTTTSSS

TT

SSTT


SSS

 .........290.........300.........310.........320.........330.........340.........350
Sequence CLVCWEPTDEPWSEHERHSPNCPFVKGEHTQNVPLSVTLATSPAQFPCTDGTDRISCFGSGSCPHFLAAA
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Known secondary structure (DSSP)
S

TT


TT
T


S


T


B
SSSSS
S


S
TTS
 .........360.........370.........380.........390.........400.........410.........420
Sequence TKRGKICIWDVSKLMKVHLKFEINAYDPAIVQQLILSGAMEVSLDITALSILQQPFPCLLAGGLLTYKSP
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Known secondary structure (DSSP) TTS
TTSSS


TT
T






B

 .........430.........440.........450.........460.........470.........480.........490
Sequence ATPLVRRTLPVLLLYSIKESDVFPKPGTLVQCLRLPKFAEEENLCIDSITPCADGIHLLVGLRTCPVERN
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Known secondary structure (DSSP)




S






BTS

TT
TTSS





 .........500.........510.........520.........530.........540.........550.........560
Sequence VSGGYLVLYKMNYATRIVTLEEEPIKIQHIKDPQDTITSLILLPPDILDNISTLGHLVITTQGGYVKILD
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Known secondary structure (DSSP)




SSSB

SS
S


GGG



GGGGG






TTS
 .........570.........580.........590.........600.........610.........620.........630
Sequence LSNFEILAKVEPPKKEGTEEQDTFVSVIYCSGTDRLCACTKGGELHFLQIGGISGVDLLVDQPFTLEILT
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Known secondary structure (DSSP) TTT




B
TTS

B

TTTTTTS



S


SSSS


 .........640.........650.........660.........670.........680.........690.........700
Sequence SLVELTRFETLTPRFSATVPPCWVETRTWKLQTDSNSWDEHVFELVLPKACMVGHVDFKFVLNSNITNIP
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Known secondary structure (DSSP)


S



TT





TTSS
SS



TT

S

 .........710.........720.........730.........740.........750.........760.........770
Sequence QIQVTLLKNKAPGLLRLCPFLEDHKEDILCGPVWLASGLDLSGHAGMLTLTSPKLVKGMAGGKYRSFLIH
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Known secondary structure (DSSP)










TGGGB
S

GGGS

SSSSB



TTS


 .........780.........790.........800.........810.........820.........830.........840
Sequence VKAVNESENLRGCDLLQEVSVTIRRFKKTSISKERVQRCAMLQFSEFHEKLVNTLCRKTDDGQITEHAQS
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Known secondary structure (DSSP)







GGGG


SSS

TT


SS


 .........850.........860.........870.........880.........890.........900.........910
Sequence LVLDTLCWLAGVHSNGPGSSKEGNENLLSKTRKFLSDIVRVCFFEAGRSIAHKCARFLALCISNGKCDPC
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Known secondary structure (DSSP) TS
SS

TSTSS
T



TT
 .........920.........930.........940.........950.........960.........970.........980
Sequence QPAFGPVLLKALLDNMSFLPAATTGGSVYWYFVLLNYVKDEDLAGCSTACASLLTAVSRQLQDTPMEALL
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Known secondary structure (DSSP) S

GGGGGG
S
TTS



 .........990.........1000.........1010.........1020.........1030.........1040.........1050
Sequence QTRYGLYSSPFDPVLFDLEMSGSEIDLSDVLEGSFTSLTGLLEVEPLHFTCVSTSDGTRIERDDGLALAI
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Known secondary structure (DSSP) S

S
SS















TTT

GGGGGS

GGGS




TT



 .........1060.........1070.........1080.........1090.........1100.........1110.........1120
Sequence SHASHFLQPPPHQSIIIERMHSGARRFVTLDFGRPILLTDVLIPTCGDLASLSIDIWTLGEEVDGRRLVV
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Known secondary structure (DSSP) TS




S


TT





TTSS

 .........1130.........1140.........1150.........1160.........1170.........1180.........1190
Sequence ATDISTHSLILHDLIPPPVCRFMKITVIGRYGSTNARAKIPLGFYYGHTYILPWESELKNQPEIDQHLAM
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Known secondary structure (DSSP) S
TTTS


SS


TT

S






SS






 .........1200.........1210.........1220.........1230.........1240.........1250.........1260
Sequence MVALQEDIQCRYNLACHRLETLLQSIDLPPLNSANNAQYFLVEEDSRVFSAYQDCIQLQLQLNLAHNAVQ
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Known secondary structure (DSSP) TTS


S

TT

 .........1270.........1280.........1290.........1300.........1310.........1320.........1330
Sequence RLKVALGASRKMLSETSNPEDLIQTSSTEQLRTIIRYLLDTLLSLLHASNGHSVPAVLQSTFHAQACEEL
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Known secondary structure (DSSP) TT






TT

TS
TTTS


S
 .........1340.........1350.........1360.........1370.........1380.........1390.........1400
Sequence FKHLCISGTPKIRLHTGLLLVQLCGGERWWGQFLSNVLQELYNSEQLLIFPQDRVFMLLSCIGQRSLSNS
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Known secondary structure (DSSP) TTTS
TT
TTS
TT





TTSS
 .........1410.........1420.........1430.........1440.........1450.........1460.........1470
Sequence GVLESLLNLLDNLLSPLQVLDIPMISWVVMLVSRLLDYVATVEDEANQWSFINNSRKIRKQLVHHKQQLN
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Known secondary structure (DSSP) TGGG





TTTTTT

 .........1480.........1490.........1500.........1510.........1520.........1530.........1540
Sequence LLKAKQKALVEQMEKEKIQSNKGSSYKLLVEQAKLKQATSKHFKDLIRLRRTFTLAHERCISVVQKLVLF
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Known secondary structure (DSSP) TT
T




 .........1550.........1560.........1570.........1580.........1590.........1600.........1610
Sequence LLSMDFTCHADLLLFVCKVLARIANATRPTIHLCEIVNEPQLERLLLLLVGTDFNRGDISWGGAWAQYSL
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Known secondary structure (DSSP) T

TTS
SSS


STTT

STTT

GGG
TT
 .........1620.........1630.........1640.........1650.........1660.........1670.........1680
Sequence TCMLQDILAGELLSVSQALDARLEVGLEQQAELMLKMMSTLEADSILQALTNTSPLSSVPMLNVCFNKLF
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Known secondary structure (DSSP) T







GGGGGSS
S





 .........1690.........1700.........1710.........1720.........1730.........1740.........1750
Sequence SMLQVHHVQLESLLQLWLTLSLNSLYNANRIPVISLNQASITSFLTVLAWYPNTLLRTWCLVLHSLTLMT
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Known secondary structure (DSSP) TTTT
S
TT



TT


SS







 .........1760.........1770.........1780.........1790.........1800.........1810.........1820
Sequence NMQLNQESTAHLLVSDPNLIHVLVKFLSGTSPHGTNQHSPQVGPTATQAMQEFLTRLQVHLSSTCPQIFS
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Known secondary structure (DSSP)






ST


TT
TTTT




TTT
 .........1830.........1840.........1850.........1860.........1870.........1880.........1890
Sequence EFLLKLIHILSTERGAFQTGQGPLDAQVKLLEFTLEQNFEVVSVSTISAVIESVTFLVHHYITCSDKVMS
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Known secondary structure (DSSP) TSTT


S
TS

TT

T

S
 .........1900.........1910.........1920.........1930.........1940.........1950.........1960
Sequence RSEMTRDQLMFDLLKLVNILVQLPLSGPAYVADLVLANQQIMSQILSALGLCNSSISVGDGLFTILTTLS
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Known secondary structure (DSSP)




TSB




B
T





 .........1970.........1980.........1990.........2000.........2010.........2020.........2030
Sequence KKASTVHMMLQPILTYMACGTCQLSEPLLWFILRVLDTSDALKAFHDMGGVQLICNNMVTSTRAIVNTAR
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Known secondary structure (DSSP)
S
S





T
STT



S
 .........2040.........2050.........2060.........2070.........2080.........2090.........2100
Sequence SMVSTIMKFLDGIHNFAPLGTITSSSPTAQPAEVLLQATPPHRRARSAAWSYIFLPEEAWCDLTIHLPAA
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Known secondary structure (DSSP)
TT



TTTSSS

SS
TSS



SS

S
SB

B

TT

 .........2110.........2120.........2130.........2140.........2150.........2160.........2170
Sequence VLLKEIHIQPHLASLATCPSSVSVEVSADGVNMLPLSTPVVTSGLTYIKIQLVKAEVASAVCLRLHRPRD
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Known secondary structure (DSSP)
SS
GGGS
SSSSS


SS

TT
SS

SS
 .........2180.........2190.........2200.........2210.........2220.........2230.........2240
Sequence ASTLGLSQIKLLGLTAFGEDQVSKTSIGWLRLLHHCLTHISDLEGMMASAAAPTANLLQTCAALLMSPYC
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Known secondary structure (DSSP)
SB


TT

TTTS
SSSTSSSTTSGGG
 .........2250.........2260.........2270.........2280.........2290.........2300.........2310
Sequence GMHSPNIEVVLVKIGLQSTRIGLKLIDILLRNSDSTIDILYQLGTTQDPGTKDRIQALLKWVSDSARVAA
Predicted secondary structure








SS confidence





































































Known secondary structure (DSSP) TTT
T

S
STT
 .........2320.........2330.........2340.........2350.........2360.........2370.........2380
Sequence MKTVEYGLLMPSPSHLHCVAAILWHSYELLVEYDLPALLDQELFELLFNWSMSLPCNMVLKKAVDSLLCS
Predicted secondary structure














SS confidence





































































Known secondary structure (DSSP)

TTS

S

SS
GGGG

TS
SSSS
 .........2390.........2400.........2410.........2420.........2430.........2440.........2450
Sequence MCHVHPNYFSLLMGWMGITPLALTESHLATLASSSQSPEAIKQLLDSGLPSLLVRSLASFCFSHISSSES
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Known secondary structure (DSSP)
TTTT






TTSSST
 .........2460.........2470.........2480.........2490.........2500.........2510.........2520
Sequence INKMPITADLVAPILRFLTEVGNSHIMKDWLGGSEVNPLWTALLFLLCHSGSTGLTTQQRTAIENATVAF
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Known secondary structure (DSSP)






TTTTTSTSTTTTS





 .........2530.........2540.........2550.........2560.........2570.........2580.........2590
Sequence FLQCISCHPNNQKLMAQVLCELFQTSPQGNISGFIRRLFLQLMLEDEKVTMFLQSPCPLYVIQHPMYGAG
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Known secondary structure (DSSP) STT
T






TTTS


SS






GGG
ST
 .........2600.........2610.........2620.........2630.........2640.........2650.........2660
Sequence HKFRTLHLPVSTTLSDVLDRVITVPVFHLFHKLLAGQPLPAEMTLAQLLTLLYDRKLPQGYRSIDLTVKL
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Known secondary structure (DSSP) TTTTSB


TTSSS

B
TT
BTS

TT

 .........2670.........2680.........2690.........2700.........2710.........2720.........2730
Sequence GSRVISLLETCPIQSPLQVFAGMGGLALIAERLIPAHSLAAFGLFLRLPGYAEVLLKERKHAQCLLRLVL
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Known secondary structure (DSSP)


TTS




TT


TTSTTTTS
 .........2740.........2750.........2760.........2770.........2780.........2790.........2800
Sequence GVLPTLPFHVLRSLFSTTPLTTDDGVLLRRMALEIGALHLILVCLSALSHHSPRVPRLEEEHVTCLLQVL
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Known secondary structure (DSSP)

TTTS
TTSTT






 .........2810.........2820.........2830.........2840.........2850.........2860.........2870
Sequence ASYINPVSSQNSNALPSVLLELLSQSCLIPAMSSYLRNPLYRALLELLRAIASCAAMVPLLLPLQTSVGT
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Known secondary structure (DSSP)
GGG


STTS
TTSST

SGGGGGGGS




 .........2880.........2890.........2900
Sequence LLAKMKTCVDLVPDIQKTAEIVYAATTSLR
Predicted secondary structure







SS confidence





























Known secondary structure (DSSP)



Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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