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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c8auwB_

Fold library idPDB HeaderMoleculeTitle
c8auwB_UNKPDB header: Blank PDB headerPDB COMPND:


Added to library: Sat Feb 18 09:14:49 2023 c8auwB_
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence EWLVLRDGCMHCDADGLHSLSYHPALNAILAVTSRGTIKVIDGTSGATLQASALSAKPGGQVKCQYISAV
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Known secondary structure (DSSP)




SS


TTTTTTS
TTT


TT

TT


TTT
 .........80.........90.........100.........110.........120.........130.........140
Sequence DKVIFVDDYAVGCRKDLNGILLLDTALQTPVSKQDDVVQLELPVTEAQQLLSACLEKVDISSTEGYDLFI
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Known secondary structure (DSSP) T
SS

TT

TTTT



SSTTS
T


TTSTT
 .........150.........160.........170.........180.........190.........200.........210
Sequence TQLKDGLKNTSHETAANHKVAKWATVTFHLPHHVLKSIASAIVNELKKINQNVAALPVASSVMDRLSYLL
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Known secondary structure (DSSP)


TT


T
 .........220.........230.........240.........250.........260.........270.........280
Sequence PSARPELGVGPGRSVDRSLMYSEANRRETFTSWPHVGYRWAQPDPMAQAGFYHQPASSGDDRAMCFTCSV
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Known secondary structure (DSSP) GGG





STT



TBGGGG
TTTTSSS

TT

SSTT


SSS

 .........290.........300.........310.........320.........330.........340.........350
Sequence CLVCWEPTDEPWSEHERHSPNCPFVKGEHTQNVPLSVTLATSPAQFPCTDGTDRISCFGSGSCPHFLAAA
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Known secondary structure (DSSP)
S

TT


TT
T


S
B
T


B
SSSS

S


S
TTS
 .........360.........370.........380.........390.........400.........410.........420
Sequence TKRGKICIWDVSKLMKVHLKFEINAYDPAIVQQLILSGAMEVSLDITALSILQQPFPCLLAGGLLTYKSP
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Known secondary structure (DSSP) TTS
TTSSS


TT
T






B

 .........430.........440.........450.........460.........470.........480.........490
Sequence ATPLVRRTLPVLLLYSIKESDVFPKPGTLVQCLRLPKFAEEENLCIDSITPCADGIHLLVGLRTCPVERN
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Known secondary structure (DSSP)




S






TTS

TT
TTSS





 .........500.........510.........520.........530.........540.........550.........560
Sequence VSGGYLVLYKMNYATRIVTLEEEPIKIQHIKDPQDTITSLILLPPDILDNISTLGHLVITTQGGYVKILD
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Known secondary structure (DSSP)




SSSB

SS
S


GGG



GGGGG






TTS
 .........570.........580.........590.........600.........610.........620.........630
Sequence LSNFEILAKVEPPKKEGTEEQDTFVSVIYCSGTDRLCACTKGGELHFLQIGGISGVDLLVDQPFTLEILT
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Known secondary structure (DSSP) TTT




B
TTSS
B

TTTTTTS



S


SSSS


 .........640.........650.........660.........670.........680.........690.........700
Sequence SLVELTRFETLTPRFSATVPPCWVETRTWKLQTDSNSWDEHVFELVLPKACMVGHVDFKFVLNSNITNIP
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Known secondary structure (DSSP)


S



TT





SS
S
SS



TT

S

 .........710.........720.........730.........740.........750.........760.........770
Sequence QIQVTLLKNKAPGLLRLCPFLEDHKEDILCGPVWLASGLDLSGHAGMLTLTSPKLVKGMAGGKYRSFLIH
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Known secondary structure (DSSP)










TGGGB
S

GGGSB
SSSS

TTS


 .........780.........790.........800.........810.........820.........830.........840
Sequence VKAVNESENLRGCDLLQEVSVTIRRFKKTSISKERVQRCAMLQFSEFHEKLVNTLCRKTDDGQITEHAQS
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Known secondary structure (DSSP)







GGGG


S
S

TT


SS


 .........850.........860.........870.........880.........890.........900.........910
Sequence LVLDTLCWLAGVHSNGPGSSKEGNENLLSKTRKFLSDIVRVCFFEAGRSIAHKCARFLALCISNGKCDPC
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Known secondary structure (DSSP) TS
SS

TTSS
T



TT
 .........920.........930.........940.........950.........960.........970.........980
Sequence QPAFGPVLLKALLDNMSFLPAATTGGSVYWYFVLLNYVKDEDLAGCSTACASLLTAVSRQLQDTPMEALL
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Known secondary structure (DSSP) S

GGGGGGG


TTS
ST

 .........990.........1000.........1010.........1020.........1030.........1040.........1050
Sequence QTRYGLYSSPFDPVLFDLEMSGSEIDLSDVLEGSFTSLTGLLEVEPLHFTCVSTSDGTRIERDDGLALAI
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Known secondary structure (DSSP)


S
SS















TTT

GGGGGS


TTS




TT


 .........1060.........1070.........1080.........1090.........1100.........1110.........1120
Sequence SHASHFLQPPPHQSIIIERMHSGARRFVTLDFGRPILLTDVLIPTCGDLASLSIDIWTLGEEVDGRRLVV
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Known secondary structure (DSSP) TS



S


TT


B


TTSS
TTTS
 .........1130.........1140.........1150.........1160.........1170.........1180.........1190
Sequence ATDISTHSLILHDLIPPPVCRFMKITVIGRYGSTNARAKIPLGFYYGHTYILPWESELKNQPEIDQHLAM
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Known secondary structure (DSSP)

TTTS

S
SS


TT










SS

S





 .........1200.........1210.........1220.........1230.........1240.........1250.........1260
Sequence MVALQEDIQCRYNLACHRLETLLQSIDLPPLNSANNAQYFLVEEDSRVFSAYQDCIQLQLQLNLAHNAVQ
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Known secondary structure (DSSP) TS


S

TT

 .........1270.........1280.........1290.........1300.........1310.........1320.........1330
Sequence RLKVALGASRKMLSETSNPEDLIQTSSTEQLRTIIRYLLDTLLSLLHASNGHSVPAVLQSTFHAQACEEL
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Known secondary structure (DSSP) T






TT

TS
TTTS


S
 .........1340.........1350.........1360.........1370.........1380.........1390.........1400
Sequence FKHLCISGTPKIRLHTGLLLVQLCGGERWWGQFLSNVLQELYNSEQLLIFPQDRVFMLLSCIGQRSLSNS
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Known secondary structure (DSSP) S
TT
TT
TT





TTSS
 .........1410.........1420.........1430.........1440.........1450.........1460.........1470
Sequence GVLESLLNLLDNLLSPLQLDIPMISWVVMLVSRLLDYVATVEDEANQWSFINNFTLAHERCISVVQKLVL
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Known secondary structure (DSSP) TGGG




TTTTT





 .........1480.........1490.........1500.........1510.........1520.........1530.........1540
Sequence FLLSMDFTCHADLLLFVCKVLARIANATRPTIHLCEIVNEPQLERLLLLLVGTDFNRGDISWGGAWAQYS
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Known secondary structure (DSSP) TT

TTS
SSS


GGGT

BTTTS
GGG
TT
 .........1550.........1560.........1570.........1580.........1590.........1600.........1610
Sequence LTCMLQDILAGELLSVSQALDARLEVGLEQQAELMLKMMSTLEADSILQALTNTSPLSSVPMLNVCFNKL
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Known secondary structure (DSSP) T







GGGGGSS
S




S
 .........1620.........1630.........1640.........1650.........1660.........1670.........1680
Sequence FSMLQVHHVQLESLLQLWLTLSLNSLYNANRIPVISLNQASITSFLTVLAWYPNTLLRTWCLVLHSLTLM
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Known secondary structure (DSSP) TTTT
B





TT


S



S



 .........1690.........1700.........1710.........1720.........1730.........1740.........1750
Sequence TNMQLNQESTAHLLVSDPNLIHVLVKFLSGTSPHGTNQHSPQVGPTATQAMQEFLTRLQVHLSSTCPQIF
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Known secondary structure (DSSP)






S


TT
TT
S




TTT
 .........1760.........1770.........1780.........1790.........1800.........1810.........1820
Sequence SEFLLKLIHILSTERGAFQTGQGPLDAQVKLLEFTLEQNFEVVSVSTISAVIESVTFLVHHYITCSDKVM
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Known secondary structure (DSSP) TSTT
T
S
TS

TT

T

S
 .........1830.........1840.........1850.........1860.........1870.........1880.........1890
Sequence SRSEMTRDQLMFDLLKLVNILVQLPLSGPAYVADLVLANQQIMSQILSALGLCNSSISVGDGLFTILTTL
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Known secondary structure (DSSP)





TSB




BTST





 .........1900.........1910.........1920.........1930.........1940.........1950.........1960
Sequence SKKASTVHMMLQPILTYMACGTCQLSEPLLWFILRVLDTSDALKAFHDMGGVQLICNNMVTSTRAIVNTA
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Known secondary structure (DSSP)
S
S





T
STT



S
 .........1970.........1980.........1990.........2000.........2010.........2020.........2030
Sequence RSMVSTIMKFLDGIHNFAPLGTITSSSPTAQPAEVLLQATPPHRRARSAAWSYIFLPEEAWCDLTIHLPA
Predicted secondary structure





































SS confidence





































































Known secondary structure (DSSP)

T



TTTSSS

SS
GGGGSSSS


SS
SS
S

TT

 .........2040.........2050.........2060.........2070.........2080.........2090.........2100
Sequence AVLLKEIHIQPHLASLATCPSSVSVEVSADGVNMLPLSTPVVTSGLTYIKIQLVKAEVASAVCLRLHRPR
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Known secondary structure (DSSP)
STTGGGS
SSSSSS

SS

TT
SS

T
 .........2110.........2120.........2130.........2140.........2150.........2160.........2170
Sequence DASTLGLSQIKLLGLTAFGEDQVSKTSIGWLRLLHHCLTHISDLEGMMASAAAPTANLLQTCAALLMSPY
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Known secondary structure (DSSP) T
S
TT

TT
SSSTSSSTTSGG
 .........2180.........2190.........2200.........2210.........2220.........2230.........2240
Sequence CGMHSPNIEVVLVKIGLQSTRIGLKLIDILLRNSDSTIDILYQLGTTQDPGTKDRIQALLKWVSDSARVA
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Known secondary structure (DSSP) GTTS
T

S
STT
 .........2250.........2260.........2270.........2280.........2290.........2300.........2310
Sequence AMKTVEYGLLMPSPSHLHCVAAILWHSYELLVEYDLPALLDQELFELLFNWSMSLPCNMVLKKAVDSLLC
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Known secondary structure (DSSP)

TTS

S

SS
GGGG

S
SSS
 .........2320.........2330.........2340.........2350.........2360.........2370.........2380
Sequence SMCHVHPNYFSLLMGWMGITPLALTESHLATLASSSQSPEAIKQLLDSGLPSLLVRSLASFCFSHISSSE
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Known secondary structure (DSSP)
TTTT






T
SSS
 .........2390.........2400.........2410.........2420.........2430.........2440.........2450
Sequence SNKMPITADLVAPILRFLTEVGNSHIMKDWLGGSEVNPLWTALLFLLCHSGSTGLTTQQRTAIENATVAF
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Known secondary structure (DSSP)






TTTTTSTSTTTTS





 .........2460.........2470.........2480.........2490.........2500.........2510.........2520
Sequence FLQCISCHPNNQKLMAQVLCELFQTSPQGNISGFIRRLFLQLMLEDEKVTMFLQSPCPLYVIQHPMYGAG
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Known secondary structure (DSSP) TTT
T






TTTS


SS






GGG
SS
 .........2530.........2540.........2550.........2560.........2570.........2580.........2590
Sequence HKFRTLHLPVSTTLSDVLDRVITVPVFHLFHKLLAGQPLPAEMTLAQLLTLLYDRKLPQGYRSIDLTVKL
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Known secondary structure (DSSP) TTTTSB


TTSSS



TT
BTS

TT

 .........2600.........2610.........2620.........2630.........2640.........2650.........2660
Sequence GSRVISLLETCPIQSPLQVFAGMGGLALIAERLIPAHSLAAFGLFLRLPGYAEVLLKERKHAQCLLRLVL
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Known secondary structure (DSSP)


TTS



TT


STTTTS
 .........2670.........2680.........2690.........2700.........2710.........2720.........2730
Sequence GVLPTLPFHVLRSLFSTTPLTTDDGVLLRRMALEIGALHLILVCLSALSHHSPRVPRLEEEHVTCLLQVL
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Known secondary structure (DSSP)

TTTS
TTSTT






 .........2740.........2750.........2760.........2770.........2780.........2790.........2800
Sequence ASYINPVSSQNSNALPSVLLELLSQSCLIPAMSSYLRNPLYRALLELLRAIASCAAMVPLLLPLQTSVGT
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Known secondary structure (DSSP)
GGG


SSSS
TTSSS

SSTTSGGGS




 .........2810.........2820.........2830
Sequence LLAKMKTCVDLVPDIQKTAEIVYAATTSLR
Predicted secondary structure







SS confidence





























Known secondary structure (DSSP)



Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
© Structural Bioinformatics Group, Imperial College, London
Michael Sternberg 
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