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 Protein Homology/analogY Recognition Engine V 2.0


 

New fold library entries added 2019 Nov 16

Fold library idPDB HeaderMoleculeTitle
c6pi5D_ 1.67 transport protein Chain: D: atrazine periplasmic binding protein;
c6i0aA_ 1.30 cell cycle Chain: A: endolytic peptidoglycan transglycosylase rlpa;
c6pfjT_ 2.08 transcription Chain: T: amfc protein;
c6k15D_ 3.40 dna binding protein Chain: D: chromatin structure-remodeling complex protein rsc8;
c6kw4H_ 7.55 dna binding protein/dna Chain: H: chromatin structure-remodeling complex protein rsc8;
c6kw3I_ 7.13 dna binding protein/dna Chain: I: chromatin structure-remodeling complex protein rsc6;
c6h8lB_ 1.54 hydrolase Chain: B: peptidoglycan-n-acetylmuramic acid deacetylase pdac;
c6rqfP_ 3.58 photosynthesis Chain: P: cytochrome b6-f complex subunit 8;
c6s3tA_ 3.50 protein binding Chain: A: 46 kda surface antigen;
c6kniB_ 1.97 biosynthetic protein Chain: B: probable diaminopimelate decarboxylase protein;
c6q0vA_ 2.90 ligase Chain: A: dna damage-binding protein 1;
c6t34I_ 5.20 virus Chain: I: coat protein;
c6kw4A_ 7.55 dna binding protein/dna Chain: A: chromatin structure-remodeling complex protein rsc58;
c6kz6C_ 2.19 hydrolase Chain: C: e165r;
c6rqfC_ 3.58 photosynthesis Chain: C: cytochrome f;
c6qazA_ 1.02 unknown function Chain: A: cyanophage-like gp41-1 intein;
c6kw4X_ 7.55 dna binding protein/dna Chain: X: chromatin structure-remodeling complex subunit rsc4;
c6kw4M_ 7.55 dna binding protein/dna Chain: M: chromatin structure-remodeling complex subunit rsc9;
c6pw7B_ 1.89 signaling protein Chain: B: stromal interaction molecule 1;
c6sofE_ 4.30 membrane protein Chain: E: insulin;
c6kw4F_ 7.55 dna binding protein/dna Chain: F: chromatin structure-remodeling complex subunit rsc7;
c6pfvA_ 3.00 transcription Chain: A: rna polymerase sigma factor;
c6kw3C_ 7.13 dna binding protein/dna Chain: C: chromatin structure-remodeling complex protein rsc30;
c6rqfE_ 3.58 photosynthesis Chain: E: cytochrome b6-f complex subunit 6;
c6kw3L_ 7.13 dna binding protein/dna Chain: L: chromatin structure-remodeling complex subunit rsc2;
c6ryxA_ 2.65 oxidoreductase Chain: A: kelch domain-containing protein;
c6mq4A_ 1.40 hydrolase Chain: A: cellulase;
c6ir5B_ 2.60 viral protein Chain: B: vp1;
c6ibiB_ 2.08 metal binding protein Chain: B: auxiliary activity cazyme;
c6jt6A_ 2.00 oxidoreductase Chain: A: extracellular pqq-dependent sugar dehydrogenase;
c6u7hB_ 3.10 viral protein Chain: B: spike glycoprotein;
c6jflB_ 2.81 membrane protein Chain: B: mitofusin-2,cdna flj57997, highly similar to transmembrane
c6iqtD_ 1.92 protein binding Chain: D: cag pathogenicity island protein (cag10);
c6pdqA_ 1.83 apoptosis Chain: A: ancestral effector caspase-3/6/7;
c6tyhK_ 1.60 hormone Chain: K: insulin a chain;
c6mfiA_ 1.84 hydrolase Chain: A: metallo-beta-lactamase;
c6r7wA_ 1.50 hydrolase Chain: A: mirolysin;
c6n1gA_ 4.00 structural protein Chain: A: aquaporin-7;
c6s54A_ 2.21 transferase Chain: A: aspartate aminotransferase family protein;
c6rqfL_ 3.58 photosynthesis Chain: L: cytochrome b6-f complex iron-sulfur subunit, chloroplastic;
c6tyhA_ 1.60 hormone Chain: A: insulin a chain;
c6oxcB_ 1.90 isomerase Chain: B: methylmalonyl-coa mutase small subunit muta;
c6kvcA_ 1.66 biosynthetic protein Chain: A: moee5;
c6rqfH_ 3.58 photosynthesis Chain: H: cytochrome b6-f complex subunit 8;
c6l3wA_ 2.60 oxidoreductase Chain: A: extra-diol dioxygenase bphc;
c6j02A_ 1.80 endocytosis Chain: A: macrophage scavenger receptor types i and ii;
c6s1zA_ 2.50 hydrolase Chain: A: angiotensin-converting enzyme;
c6k15K_ 3.40 dna binding protein Chain: K: chromatin structure-remodeling complex protein rsc3;
c6n0sA_ 1.92 dna binding protein Chain: A: atpase associated with various cellular activities, aaa_5;
c6rqfN_ 3.58 photosynthesis Chain: N: cytochrome b6-f complex subunit 7;
c6kw3W_ 7.13 dna binding protein/dna Chain: W: nuclear protein sth1/nps1;
c6k15E_ 3.40 dna binding protein Chain: E: high temperature lethal protein 1;
c6pdqE_ 1.83 apoptosis Chain: E: ancestral effector caspase-3/6/7;
c6kw3G_ 7.13 dna binding protein/dna Chain: G: chromatin structure-remodeling complex subunit sfh1;
c6sofI_ 4.30 membrane protein Chain: I: insulin;
c6rqfO_ 3.58 photosynthesis Chain: O: cytochrome b6-f complex subunit 5;
c6sofG_ 4.30 membrane protein Chain: G: insulin;
c6ryvA_ 2.30 oxidoreductase Chain: A: kelch domain-containing protein;
c6r7vA_ 1.40 hydrolase Chain: A: mirolysin;
c6tyhC_ 1.60 hormone Chain: C: insulin a chain;
c6q68D_ 3.16 viral protein Chain: D: genome polyprotein;
c6sofK_ 4.30 membrane protein Chain: K: insulin;
c6o6wA_ UNK unknown function Chain: A: myeloid-derived growth factor;
c6n04B_ 2.00 biosynthetic protein Chain: B: absh3;
c6rqfF_ 3.58 photosynthesis Chain: F: cytochrome b6-f complex subunit 7;
c6kw3J_ 7.13 dna binding protein/dna Chain: J: nuclear protein sth1/nps1;
c6kksA_ 2.15 dna binding protein/dna Chain: A: transcription factor wer;
c6q67B_ 2.25 viral protein Chain: B: 3a;
c6tyhI_ 1.60 hormone Chain: I: insulin a chain;
c6tyhG_ 1.60 hormone Chain: G: insulin a chain;
c6rqfM_ 3.58 photosynthesis Chain: M: cytochrome b6-f complex subunit 6;
c6kw4V_ 7.55 dna binding protein/dna Chain: V: nuclear protein sth1/nps1;
c6tyhE_ 1.60 hormone Chain: E: insulin a chain;


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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Lawrence Kelley, Michael Sternberg 
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