Standard Mode | Switch to Expert Mode | Login to view past jobsRetrieve Phyre Job Id
 
Subscribe to Phyre at Google Groups
Email:
Visit Phyre at Google Groups
 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6pi5D_

Fold library idPDB HeaderMoleculeTitle
c6pi5D_1.67PDB header: transport proteinChain: D: PDB Molecule: atrazine periplasmic binding protein;


Added to library: Sat Nov 16 08:28:36 2019
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence QEPLKVAFVYAGPVSDAGYTYAHDQGRLAMEKNLGAKVKSSYVENVPEGADAERVIRKLAADGNKLIFTT
Predicted secondary structure






















SS confidence





































































Known secondary structure (DSSP)



SS
GGGSSGGG
S

STTT
S
 .........80.........90.........100.........110.........120.........130.........140
Sequence SFGFMNPTERVAKAFPNVVFEHATGVKLAKNLGVYESRQYEGTYLQGVLAAKMTKTGVIGFVGSFPVPEV
Predicted secondary structure

























SS confidence





































































Known secondary structure (DSSP) SGGG
TTST



BTT
T
SSSS

S
 .........150.........160.........170.........180.........190.........200.........210
Sequence IRNINAYTLGAQSVNPKIKTKVIWVSTWYDPAKERQAAETLIAQGADVLTQNTNSPATLQVAQEKGKYAF
Predicted secondary structure




















SS confidence





































































Known secondary structure (DSSP) TT
TT

SSS

TT

SSSSST
 .........220.........230.........240.........250.........260.........270.........280
Sequence GCDADMSKFAPKAHLTASISNWGDFYTKTAQAVMAGTWKSEEVHWGMAEGMVKMAPLNAAVPPDAAKLFE
Predicted secondary structure


























SS confidence





































































Known secondary structure (DSSP) S

GGG
TTT

T





TTTTS



TTS
 .........290.........300.........310.........320.........330..
Sequence EKKAAMVSGKIKPFQGPLKDQSGAVKVAAGSDLPLASLKGMNWYVQGVEGTI
Predicted secondary structure





















SS confidence



















































Known secondary structure (DSSP) TSS
TTBS
BTT


TT
B

T



BTT



Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


Phyre is now FREE for commercial users!

All images and data generated by Phyre2 are free to use in any publication with acknowledgement

Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
© Structural Bioinformatics Group, Imperial College, London
Michael Sternberg 
Disclaimer
Terms and Conditions
Structural Biology Group logo Imperial logo
BBSRC logo
Phyre2 is part of Genome3D