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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6kniB_

Fold library idPDB HeaderMoleculeTitle
c6kniB_1.97PDB header: biosynthetic proteinChain: B: PDB Molecule: probable diaminopimelate decarboxylase protein;


Added to library: Sat Nov 16 08:32:35 2019
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence MRIVQPVIEQLKAQSHPVCHYIYDLVGLEHHLQHITSSLPSNCQMYYAMKANSERTILDTISQYVEGFEV
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Known secondary structure (DSSP)
TTTTT


S
TTGGG


TTSS
 .........80.........90.........100.........110.........120.........130.........140
Sequence ASQGEIAKGLAFKPANHIIFGGPGKTDEELRYAVSEGVQRIHVESMHELQRLNAILEDEDKTQHILLRVN
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Known secondary structure (DSSP) SSTTS
GGG

TT

T
S

T

 .........150.........160.........170.........180.........190.........200.........210
Sequence LAPTQFGISEDEVDDVIEAALVMPNIHLDGFHFHSISNNLDSNLHVDVVKLYFKKAKSWSEKHRFPLKHI
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Known secondary structure (DSSP)



SSSGGG
TT



SSB

T



 .........220.........230.........240.........250.........260.........270.........280
Sequence NLGGGIGVNYADLTSQFEWDNFVENFKTLIVEQEMEDVTLNFECGRFIVAHIGYYVTEVLDIKKVHGAWY
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Known secondary structure (DSSP)



B


SS
TT



TT
TTSSGGGTT
 .........290.........300.........310.........320.........330.........340.........350
Sequence AILRGGTQQFRLPVSWQHNHPFEIYRYKDNPYSFEKVSISRQDTTLVGQLCTPKDVFAREVQIDAISTGD
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Known secondary structure (DSSP) SS
TTT

TS








SSS



S
S
SSTT
S
TT
 .........360.........370.........380.
Sequence VIVFKYAGAYGWSISHHDFLSHPHPEFIYLT
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Known secondary structure (DSSP)
S
SSSSGGGS
TTGGG





Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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