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 Protein Homology/analogY Recognition Engine V 2.0


 

New fold library entries added 2017 Sep 02

Fold library idPDB HeaderMoleculeTitle
c5xyiJ_ 3.35 ribosome Chain: J: uncharacterized protein;
c5xtdb_ 3.70 oxidoreductase/electron transport Chain: B: nadh dehydrogenase [ubiquinone] iron-sulfur protein 8,
c5gyiA_ 1.97 hydrolase Chain: A: endo-1,4-beta-xylanase;
c5odqF_ 2.15 oxidoreductase Chain: F: methyl-viologen reducing hydrogenase, subunit a;
c5xyib_ 3.35 ribosome Chain: B: ribosomal protein s3ae, putative;
c5x2eA_ 1.30 cell adhesion Chain: A: tegumental protein 20.8 kda;
c6aqyD_ 2.55 oxidoreductase Chain: D: gdp-l-fucose synthetase;
c5xfsA_ 2.90 protein transport Chain: A: pe family protein pe8;
c5v51B_ 2.92 lipid binding protein Chain: B: pr-1 protein;
c5x5lM_ 2.75 dna binding protein/dna Chain: M: ader;
c5odcC_ 2.30 oxidoreductase Chain: C: heterodisulfide reductase, subunit c;
c5xyiL_ 3.35 ribosome Chain: L: uncharacterized protein;
c5vb0E_ 2.69 transferase Chain: E: fosfomycin resistance protein fosa3;
c5guqC_ 1.70 hydrolase Chain: C: helix-turn-helix domain-containing protein;
c5xxuW_ 3.35 ribosome Chain: W: ribosomal protein us8;
c5gukA_ 2.00 biosynthetic protein Chain: A: cyclolavandulyl diphosphate synthase;
c5xxuI_ 3.35 ribosome Chain: I: ribosomal protein es8;
c5vxjH_ 2.50 immune system Chain: H: single-domain antibody jmk-e3;
c5odhG_ 2.20 oxidoreductase Chain: G: heterodisulfide reductase, subunit a;
c5o5oD_ 3.40 chaperone Chain: D: rnase adapter protein rapz;
c5v2cY_ 1.90 electron transport, photosynthesis Chain: Y: photosystem ii reaction center protein ycf12;
c5xxud_ 3.35 ribosome Chain: D: ribosomal protein us3;
c5m2iH_ 2.15 cytokine Chain: H: vhh1;
c5odiE_ 2.40 oxidoreductase Chain: E: methyl-viologen reducing hydrogenase, subunit g;
c5x9yC_ 3.44 dna binding protein Chain: C: dna mismatch repair protein mutl;
c5nccB_ 3.12 oxidoreductase Chain: B: fatty acid photodecarboxylase;
c5xyiM_ 3.35 ribosome Chain: M: ribosomal protein l7ae, putative;
c6aq3C_ 2.40 transport protein Chain: C: trafficking protein particle complex subunit 3;
c5odhH_ 2.20 oxidoreductase Chain: H: heterodisulfide reductase, subunit b;
c5xxuR_ 3.35 ribosome Chain: R: ribosomal protein es17;
c6ao8A_ 1.70 ligase Chain: A: arginine--trna ligase;
c5m2mH_ 2.30 cytokine Chain: H: llama nanobody vhh3;
c6ao7A_ 1.85 transferase Chain: A: acetyltransferase;
c5xtdo_ 3.70 oxidoreductase/electron transport Chain: O: nadh dehydrogenase [ubiquinone] flavoprotein 2,
c5xtbW_ 3.40 oxidoreductase/electron transport Chain: W: nadh dehydrogenase [ubiquinone] 1 alpha subcomplex subunit
c5okzJ_ 3.20 rna binding protein Chain: J: m-phase phosphoprotein 6 homolog;
c5xxuf_ 3.35 ribosome Chain: F: ribosomal protein us7;
c5v2cT_ 1.90 electron transport, photosynthesis Chain: T: photosystem ii reaction center protein t;
c5lqlD_ 1.50 hydrolase Chain: D: 4-hydroxybenzoyl-coa thioesterase;
c5odcD_ 2.30 oxidoreductase Chain: D: methyl-viologen reducing hydrogenase subunit d;
c5xyiC_ 3.35 ribosome Chain: C: uncharacterized protein;
c5xyiN_ 3.35 ribosome Chain: N: 40s ribosomal protein s13, putative;
c5xtdm_ 3.70 oxidoreductase/electron transport Chain: M: nadh-ubiquinone oxidoreductase 75 kda subunit,
c5vjjA_ 2.52 metal binding protein Chain: A: avirulence protein avrp123;
c5tp1Q_ 2.31 protein transport Chain: Q: inclusion membrane protein e;
c5gneA_ 2.50 hydrolase Chain: A: leucine aminopeptidase;
c5vxkB_ 2.55 immune system Chain: B: single-domain antibody jmk-h2;
c5xyiU_ 3.35 ribosome Chain: U: ribosomal protein s10p/s20e, putative;
c5xyiP_ 3.35 ribosome Chain: P: ribosomal protein s19, putative;
c5x5jA_ 1.40 dna binding protein Chain: A: ader;
c5o9eB_ 1.88 ribosome Chain: B: putative u3 small nucleolar ribonucleoprotein protein;
c2ncxA_ UNK antimicrobial protein Chain: A: pseudin-2;
c5xyia_ 3.35 ribosome Chain: A: 40s ribosomal protein sa;
c5tp1P_ 2.31 protein transport Chain: P: inclusion membrane protein e;
c5vveA_ 1.70 isomerase Chain: A: phosphoglycerate mutase;
c5xyiK_ 3.35 ribosome Chain: K: plectin/s10 domain containing protein;
c5xyiV_ 3.35 ribosome Chain: V: 40s ribosomal protein s21;
c6anzA_ 1.60 unknown function Chain: A: uncharacterized protein;
c5xyiD_ 3.35 ribosome Chain: D: ribosomal protein s3, putative;
c5v1tA_ 2.10 metal binding protein Chain: A: radical sam;
c5xa5A_ 1.60 cell adhesion Chain: A: alpha-catenin-like protein hmp-1;
c5xxuK_ 3.35 ribosome Chain: K: ribosomal protein es10;
c5x2dA_ 2.60 cell adhesion Chain: A: tegumental protein 20.8 kda;
c5xyiQ_ 3.35 ribosome Chain: Q: 40s ribosomal protein s16, putative;
c5xxuZ_ 3.35 ribosome Chain: Z: ribosomal protein es25;
c5xyiF_ 3.35 ribosome Chain: F: 40s ribosomal protein s5-b, putative;
c5wnnB_ 1.85 phosphate binding protein Chain: B: phosphate-binding protein psts;
c5xyiW_ 3.35 ribosome Chain: W: ribosomal protein s15a;
c5xtdi_ 3.70 oxidoreductase/electron transport Chain: I: nadh dehydrogenase [ubiquinone] 1 alpha subcomplex subunit
c5xyin_ 3.35 ribosome Chain: N: 40s ribosomal protein s13, putative;
c5v2ct_ 1.90 electron transport, photosynthesis Chain: T: photosystem ii reaction center protein t;
c5xxuT_ 3.35 ribosome Chain: T: ribosomal protein es19;
c5xxua_ 3.35 ribosome Chain: A: ribosomal protein us2;
c5vgbA_ 1.50 hydrolase/hydrolase inhibitor Chain: A: crispr-associated endonuclease cas9;
c5xxuG_ 3.35 ribosome Chain: G: ribosomal protein es6;
c5xyiE_ 3.35 ribosome Chain: E: 40s ribosomal protein s4;
c5vgbB_ 1.50 hydrolase/hydrolase inhibitor Chain: B: anti-crispr protein (acriic1);
c5xyiR_ 3.35 ribosome Chain: R: 40s ribosomal protein s17-b, putative;
c5tp1R_ 2.31 protein transport Chain: R: inclusion membrane protein e;
c5xxuY_ 3.35 ribosome Chain: Y: ribosomal protein es24;
c5xa5B_ 1.60 cell adhesion Chain: B: beta-catenin-like protein hmp-2;
c6ansD_ 2.20 unknown function Chain: D: uncharacterized protein;
c5xyig_ 3.35 ribosome Chain: G: 40s ribosomal protein s6;
c5v2cy_ 1.90 electron transport, photosynthesis Chain: Y: photosystem ii reaction center protein ycf12;
c5xxuE_ 3.35 ribosome Chain: E: ribosomal protein es4;
c5xyiX_ 3.35 ribosome Chain: X: 40s ribosomal protein s23, putative;
c5xyid_ 3.35 ribosome Chain: D: ribosomal protein s3, putative;
c5xxuM_ 3.35 ribosome Chain: M: ribosomal protein es12;
c5xxuH_ 3.35 ribosome Chain: H: ribosomal protein es7;
c5xyiS_ 3.35 ribosome Chain: S: ribosomal protein s13p/s18e, putative;
c5xtdK_ 3.70 oxidoreductase/electron transport Chain: K: nadh dehydrogenase [ubiquinone] flavoprotein 3,
c5xyiI_ 3.35 ribosome Chain: I: 40s ribosomal protein s8;
c5t42A_ UNK viral protein Chain: A: envelope glycoprotein;
c5xyiH_ 3.35 ribosome Chain: H: 40s ribosomal protein s7, putative;
c5xyiB_ 3.35 ribosome Chain: B: ribosomal protein s3ae, putative;
c6aphA_ 1.65 hydrolase Chain: A: adenosylhomocysteinase;
c5xyiZ_ 3.35 ribosome Chain: Z: uncharacterized protein;
c5xyiA_ 3.35 ribosome Chain: A: 40s ribosomal protein sa;
c5xxuP_ 3.35 ribosome Chain: P: ribosomal protein us19;
c5xfsB_ 2.90 protein transport Chain: B: ppe family protein ppe15;
c5xyiG_ 3.35 ribosome Chain: G: 40s ribosomal protein s6;
c5xyiT_ 3.35 ribosome Chain: T: ribosomal protein s19e, putative;
c5xyie_ 3.35 ribosome Chain: E: 40s ribosomal protein s4;
c5xyiY_ 3.35 ribosome Chain: Y: ribosomal protein s24e, putative;
c5xxum_ 3.35 ribosome Chain: M: ribosomal protein es12;
c5tp1S_ 2.31 protein transport Chain: S: inclusion membrane protein e;
c5tvdA_ 1.73 unknown function Chain: A: tm16;


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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Lawrence Kelley, Michael Sternberg 
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