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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c5gyiA_

Fold library idPDB HeaderMoleculeTitle
c5gyiA_1.97PDB header: hydrolaseChain: A: PDB Molecule: endo-1,4-beta-xylanase;


Added to library: Sat Sep 2 08:30:24 2017
 
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 1........10.........20.........30.........40.........50.........60.........70
Sequence QVVKPTDERIIDPSTANTQLTGGVTYNTTSGGNKPLAGSPYGYETWIDTGGGVCSLTWYGADQGGGAAFK
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Known secondary structure (DSSP)






TTS

GGG






S

S

SS

TTSS

TTS



SSSGGG

 .........80.........90.........100.........110.........120.........130.........140
Sequence ATWTNPHDFLGRLGYFWNENKPYSHYENIYCGFNYTRSGRKTAGDYSYIGIYGWSRNPSASNSNERLIEY
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Known secondary structure (DSSP) S
SS

SS

GGGG


TTSS
S

TT
SSGGGS
 .........150.........160.........170.........180.........190.........200.........210
Sequence YIVEDWFGNQWQADTSPMGINTTGGTVMGSFTCDGSSYQIIKNTRVNQPSIEGDKTFVQYFSIRQSPRKS
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Known secondary structure (DSSP)



SSS
TTS



STT

TTSSSS

S
 .........220.........230.........240.........250.........260.........270..
Sequence GTISITCHFKKWEKLGMKLGDNMYECKFLIEAGAGEGFFDARLIQFYRADNEGNILQITPHH
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Known secondary structure (DSSP) TT



S
SSS
TT






Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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