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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c5odqF_

Fold library idPDB HeaderMoleculeTitle
c5odqF_2.15PDB header: oxidoreductaseChain: F: PDB Molecule: methyl-viologen reducing hydrogenase, subunit a;


Added to library: Sat Sep 2 08:28:37 2017
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence VKLSVEPVTRVEGHGKISVSFDDSGNLDKVRFHVVEVRGFEKFLEGRYVEDAPIYTPRICGICQVAHHLA
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Known secondary structure (DSSP)

S

SSBS

TTS





TTTSBGGGGGGG
SSS
 .........80.........90.........100.........110.........120.........130.........140
Sequence SAKAVDNVFGVKIPETAELLRNLMHQGATVHSHALHFYMLAAPDLMFPTTDDVLKRNLMGIAKEHPEIIK
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Known secondary structure (DSSP) TT



TT
TT
S
GGGSS
 .........150.........160.........170.........180.........190.........200.........210
Sequence DAIELRKAGQNVVRVVGGRAIHPVTAVVGGQSKSLKEEERDELLKLSERTIELSEKSIEVGKKLLENIKD
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Known secondary structure (DSSP) SSSSS


TTSS


 .........220.........230.........240.........250.........260.........270.........280
Sequence EDLLDIGYFESAHMGMVNNGVHDLYDGKLRVVNSEGKVEYEFDPSEYMNYIAEGVKPYSYLKFPYLKDKG
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Known secondary structure (DSSP) TT
TTTT



TT
SSSS
TTS

GGGGGGT

TT
SS
TTT
 .........290.........300.........310.........320.........330.........340.........350
Sequence EEDGIYRVNTLSRLNVSDKMATPLAQKYYDEFVKEFGKPCHHPMLFHYARLIELLSSAEMVKELLENDKI
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Known secondary structure (DSSP)

ST
SB
SS
SS


GGGSGGG
 .........360.........370.........380.........390.........400.........410.........420
Sequence VGEDIRAEPEEVVGDGVGCVEAPRGTLIHHFKTDDDGIITDTNLVVATVQNNPAMDIGVRKVAEKYIKAP
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Known secondary structure (DSSP) G
S

B



S

STT
TT
BGGGGG
SSG
 .........430.........440.......
Sequence EDATPQVLNYMEMLIRAYDPCLSCATH
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Known secondary structure (DSSP) GG

T

B


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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