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 Protein Homology/analogY Recognition Engine V 2.0


New fold library entries added 2017 Apr 01

Fold library idPDB HeaderMoleculeTitle
c5mj1A_ 1.80 immune system Chain: A: cd83 antigen;
c5gz8A_ 2.50 transferase Chain: A: protein o-mannose kinase;
c5il5A_ 2.91 lyase Chain: A: mlnd;
c5loiA_ 3.15 signaling protein Chain: A: rad26;
c5iwyD_ 1.99 lyase Chain: D: 2-c-methyl-d-erythritol 2,4-cyclodiphosphate synthase;
c5h0iB_ 2.56 hydrolase Chain: B: asparaginyl endopeptidase;
c5jwrE_ 2.61 transcription regulator Chain: E: circadian clock protein kaia;
c5ihbB_ 2.24 immune system Chain: B: myeloid cell surface antigen cd33;
c5ua7A_ UNK antimicrobial protein Chain: A: ocellatin-lb2;
c5j1jA_ 1.55 transcription Chain: A: site-determining protein;
c5mb8L_ 10.00 chaperone Chain: L: 25.3 kda heat shock protein, chloroplastic;
c5wurB_ 2.60 metal binding protein Chain: B: ecf rna polymerase sigma factor sigw;
c5uasA_ 1.60 lyase Chain: A: ulvanlyase-pl25;
c5irpA_ 2.10 isomerase Chain: A: alanine racemase 2;
c5mb8J_ 10.00 chaperone Chain: J: 25.3 kda heat shock protein, chloroplastic;
c5u9sA_ UNK antimicrobial protein Chain: A: ocellatin-f1;
c5fsbB_ 1.65 sugar binding protein Chain: B: tectonin 2;
c5up6N_ 3.74 transcription/dna/rna Chain: N: transcription termination factor nun;
c5jwqA_ 3.87 transcription regulator Chain: A: circadian clock protein kinase kaic;
c5x7fA_ 2.00 transferase Chain: A: putative o-methyltransferase rv1220c;
c5k39A_ 1.98 structural protein Chain: A: cellulosome anchoring protein cohesin region;
c5izwA_ 1.74 rna binding protein Chain: A: pls9-ppr;
c5mmdF_ 1.75 hydrolase Chain: F: metallo-beta-lactamase 1;
c5iwzA_ 2.10 cell cycle Chain: A: synaptonemal complex protein 2;
c5il6A_ 1.90 hydrolase Chain: A: polyketide synthase/nonribosomal peptide synthetase hybrid
c5ivuA_ 2.42 actin-binding protein Chain: A: cofilin;
c5in2A_ 1.55 oxidoreductase Chain: A: extracellular superoxide dismutase [cu-zn];
c5g4yA_ 2.00 signaling protein Chain: A: chemotaxis protein;
c5h5mA_ 2.40 cell adhesion Chain: A: alpha-catenin-like protein hmp-1;
c5iysA_ 1.93 transferase/transferase inhibitor Chain: A: phytoene synthase;
c5v68A_ 3.46 cell cycle Chain: A: cell division protein ftsz;
c5gk9A_ 2.40 transferase/metal binding protein Chain: A: histone acetyltransferase kat7;
c5ua8A_ UNK antimicrobial protein Chain: A: ocellatin-f1;
c5h7vA_ 3.82 hydrolase inhibitor Chain: A: kunitz-type protease inhibitor 1;
c5iwwD_ 2.65 rna binding protein Chain: D: pls9-ppr;
c5jyuA_ UNK sigaling protein Chain: A: two-component sensor histidine kinase;
c5l6nI_ 1.63 hydrolase Chain: I: thrombin inhibitor madanin 1;
c5wuqD_ 2.80 metal binding protein Chain: D: anti-sigma-w factor rsiw;
c5um2A_ 1.14 transport protein Chain: A: abc transporter sulfate binding protein;
c5ix5A_ UNK antibiotic Chain: A: antibacterial factor-related peptide 2;
c5x2hA_ 2.30 hydrolase/rna/dna Chain: A: crispr-associated endonuclease cas9;
c5gk9B_ 2.40 transferase/metal binding protein Chain: B: brd1 protein;
c5k39B_ 1.98 structural protein Chain: B: dockerin module from a protein of unknown function;
c5to3B_ 2.34 hydrolase Chain: B: prothrombin,thrombomodulin;
c5l0pA_ 2.30 de novo protein Chain: A: transcription factor etv6, transcription factor etv6,
c5u9vA_ UNK antimicrobial protein Chain: A: ocellatin-lb1;
c5ua6A_ UNK antimicrobial protein Chain: A: ocellatin-lb1;
c5u9rA_ UNK antimicrobial protein Chain: A: ocellatin-lb2;
c5uznA_ 1.99 rna binding protein Chain: A: at27789p;
c5v0rA_ 1.55 ligase Chain: A: ubiquitin-conjugating enzyme;

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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
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Michael Sternberg 
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