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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c5h5mA_

Fold library idPDB HeaderMoleculeTitle
c5h5mA_2.40PDB header: cell adhesionChain: A: PDB Molecule: alpha-catenin-like protein hmp-1;


Added to library: Sat Apr 1 09:08:26 2017
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence GDLINEIDTFQNRIEIDPAHYRRGTDRPDLEGHCERIVSGSASIADAESTRENRKQKIVAECNNLRQALQ
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Known secondary structure (DSSP)
T


TTT

T
TTS
 .........80.........90.........100.........110.........120.........130.........140
Sequence ELLTEYEKSTGRRDDIPLGIAEVHKRTKDLRRHLRRAIVDHISDAFLDTRTPLILLIEAAKEGHEENTRY
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Known secondary structure (DSSP) TT

TT

TS
SSTTT
 .........150.........160.........170.........180.........190.........200.........210
Sequence RSKMFQEHANEIVSVARLSCQLSSDVESVSVIQHTAAQLEKLAPQVAQAAILLCHQPTSKTAQENMETYK
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Known secondary structure (DSSP) GGG


STT
 .........220.........230.........240.........250.........260.........270.........280
Sequence NAWFDKVRLLTTALDNITTLDDFLAVSEAHIVEDCERGIKGITACETVDCAAGSIRGRALRVCDVVDAEM
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Known secondary structure (DSSP) TS




 .........290.........300.........310.........320.........330.........340.........350
Sequence DFLQNSEYTETVKQAVRILKTQRVDQFAERASALANRQEAHGLTWDPKTKEEEMNEFINACTLVHDAVKD
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Known secondary structure (DSSP) S


TGGG

 ........
Sequence IRHALLMN
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Known secondary structure (DSSP)


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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