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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c5to3B_

Fold library idPDB HeaderMoleculeTitle
c5to3B_2.34PDB header: hydrolaseChain: B: PDB Molecule: prothrombin,thrombomodulin;


Added to library: Sat Apr 1 10:04:48 2017
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence IVEGSDAEIGMSPWQVMLFRKSPQELLCGASLISDRWVLTAAHCLLYPPWDKNFTENDLLVRIGKHSRTR
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Known secondary structure (DSSP)
BS


TTS
TTTTTT
SSS
GGGT

GGGS

BSS
 .........80.........90.........100.........110.........120.........130.........140
Sequence YERNIEKISMLEKIYIHPRYNWRENLDRDIALMKLKKPVAFSDYIHPVCLPDRETAASLLQAGYKGRVTG
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Known secondary structure (DSSP)

TTT


TT
BTTTT
BT

SS




SS



B




TT
 .........150.........160.........170.........180.........190.........200.........210
Sequence WGNLKETKGQPSVLQVVNLPIVERPVCKDSTRIRITDNMFCAGYKPDEGKRGDACEGDSGGPFVMKSPFN
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Known secondary structure (DSSP) S

SS





SB

T
SS


TT


GGG



B

TT
TT

TTT
 .........220.........230.........240.........250.........260.........270.........280
Sequence NRWYQMGIVSAGAGCDRDGKYGFYTHVFRLKKWIQKVIDQFGGGSEPVDPCFRANCEYQCQPLNQTSYLC
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Known secondary structure (DSSP)


SSSS
TT

TGGG





S
GGGT


SSSSSS
 .........290.........300.........310.........320.........330.........340.........350
Sequence VCAEGFAPIPHEPHRCQMFCNQTACPADCDPNTQASCECPEGYILDDGFICTDIDECENGGFCSGVCHNL
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Known secondary structure (DSSP)

TTTT

SSS
GGGT

TTTTT


SS
SS
 .........360.......
Sequence PGTFECICGARHIGTDC
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Known secondary structure (DSSP) TT


S



Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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