Email l.a.kelley@imperial.ac.uk Description P69805 Date Thu Jan 5 12:12:01 GMT 2012 Unique Job ID faecc54ca0d9980c

Detailed template information

# Template Alignment Coverage 3D Model Confidence % i.d. Template Information

1 c2dmwA_ 37.4 20 PDB header:membrane protein Chain: A: PDB Molecule:synaptobrevin-like 1 variant; PDBTitle: solution structure of the longin domain of synaptobrevin-2 like protein 1 2 c3aqpB_ 23.9 11 PDB header:membrane protein Chain: B: PDB Molecule:probable secdf protein-export membrane protein; PDBTitle: crystal structure of secdf, a translocon-associated membrane protein,2 from thermus thrmophilus 3 d1ljra1 21.6 13 Fold:GST C-terminal domain-like Superfamily:GST C-terminal domain-like Family:Glutathione S-transferase (GST), C-terminal domain 4 d1iyxa2 19.2 24 Fold:Enolase N-terminal domain-like Superfamily:Enolase N-terminal domain-like Family:Enolase N-terminal domain-like 5 c2jttD_ 17.2 13 PDB header:calcium binding protein/antitumor protei Chain: D: PDB Molecule:calcyclin-binding protein; PDBTitle: solution structure of calcium loaded s100a6 bound to c-2 terminal siah-1 interacting protein 6 c1zroB_ 16.6 12 PDB header:cell invasion Chain: B: PDB Molecule:erythrocyte binding antigen region ii; PDBTitle: crystal structure of eba-175 region ii (rii) crystallized2 in the presence of (alpha)2,3-sialyllactose 7 c3htkB_ 15.8 13 PDB header:recombination/replication/ligase Chain: B: PDB Molecule:structural maintenance of chromosomes protein 5; PDBTitle: crystal structure of mms21 and smc5 complex 8 d1v97a1 14.8 20 Fold:CO dehydrogenase ISP C-domain like Superfamily:CO dehydrogenase ISP C-domain like Family:CO dehydrogenase ISP C-domain like 9 d1oaia_ 13.9 16 Fold:RuvA C-terminal domain-like Superfamily:UBA-like Family:TAP-C domain-like 10 d1axda1 13.2 16 Fold:GST C-terminal domain-like Superfamily:GST C-terminal domain-like Family:Glutathione S-transferase (GST), C-terminal domain 11 d1hh4e_ 13.1 26 Fold:Immunoglobulin-like beta-sandwich Superfamily:E set domains Family:RhoGDI-like 12 c1yx5A_ 12.6 29 PDB header:hydrolase Chain: A: PDB Molecule:26s proteasome non-atpase regulatory subunit 4; PDBTitle: solution structure of s5a uim-1/ubiquitin complex 13 c1yhuW_ 11.2 8 PDB header:oxygen storage/transport Chain: W: PDB Molecule:hemoglobin b1a chain; PDBTitle: crystal structure of riftia pachyptila c1 hemoglobin reveals novel2 assembly of 24 subunits. 14 d2i4ra1 10.9 35 Fold:AtpF-like Superfamily:AtpF-like Family:AtpF-like 15 d1ds6b_ 10.9 29 Fold:Immunoglobulin-like beta-sandwich Superfamily:E set domains Family:RhoGDI-like 16 c3bd0D_ 10.8 11 PDB header:peptide binding protein Chain: D: PDB Molecule:protein memo1; PDBTitle: crystal structure of memo, form ii 17 d3cx5d2 10.3 17 Fold:Single transmembrane helix Superfamily:Cytochrome c1 subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase), transmembrane anchor Family:Cytochrome c1 subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase), transmembrane anchor 18 d1ppjd2 10.2 28 Fold:Single transmembrane helix Superfamily:Cytochrome c1 subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase), transmembrane anchor Family:Cytochrome c1 subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase), transmembrane anchor 19 c2j96B_ 10.0 22 PDB header:photosynthesis Chain: B: PDB Molecule:phycoerythrocyanin alpha chain; PDBTitle: the e-configuration of alfa-phycoerythrocyanin 20 c3c9pA_ 9.9 24 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:uncharacterized protein sp1917; PDBTitle: crystal structure of uncharacterized protein sp1917 21 c1l2aD_ not modelled 9.7 16 PDB header:hydrolase Chain: D: PDB Molecule:cellobiohydrolase; PDBTitle: the crystal structure and catalytic mechanism of2 cellobiohydrolase cels, the major enzymatic component of3 the clostridium thermocellum cellulosome 22 d1l1ya_ not modelled 9.7 16 Fold:alpha/alpha toroid Superfamily:Six-hairpin glycosidases Family:Cellulases catalytic domain 23 d1go5a_ not modelled 9.7 20 Fold:RuvA C-terminal domain-like Superfamily:UBA-like Family:TAP-C domain-like 24 d1vmja_ not modelled 9.4 23 Fold:YjbQ-like Superfamily:YjbQ-like Family:YjbQ-like 25 d1k3ra2 not modelled 9.3 19 Fold:alpha/beta knot Superfamily:alpha/beta knot Family:Hypothetical protein MTH1 (MT0001), dimerisation domain 26 c2kdtA_ not modelled 9.3 50 PDB header:protein transport Chain: A: PDB Molecule:neuroendocrine convertase 1; PDBTitle: pc1/3 dcsg sorting domain structure in dpc 27 d1t3qa1 not modelled 9.1 11 Fold:CO dehydrogenase ISP C-domain like Superfamily:CO dehydrogenase ISP C-domain like Family:CO dehydrogenase ISP C-domain like 28 d2ebfx1 not modelled 8.9 18 Fold:PMT central region-like Superfamily:PMT central region-like Family:PMT central region-like 29 d1xeqa1 not modelled 8.7 50 Fold:S15/NS1 RNA-binding domain Superfamily:S15/NS1 RNA-binding domain Family:N-terminal, RNA-binding domain of nonstructural protein NS1 30 c2vh3B_ not modelled 8.6 29 PDB header:unknown function Chain: B: PDB Molecule:ranasmurfin; PDBTitle: ranasmurfin 31 c3r66A_ not modelled 8.5 50 PDB header:viral protein/antiviral protein Chain: A: PDB Molecule:non-structural protein 1; PDBTitle: crystal structure of human isg15 in complex with ns1 n-terminal region2 from influenza virus b, northeast structural genomics consortium3 target ids hx6481, hr2873, and or2 32 d1t33a1 not modelled 8.3 14 Fold:DNA/RNA-binding 3-helical bundle Superfamily:Homeodomain-like Family:Tetracyclin repressor-like, N-terminal domain 33 c3cloC_ not modelled 8.3 14 PDB header:transcription regulator Chain: C: PDB Molecule:transcriptional regulator; PDBTitle: crystal structure of putative transcriptional regulator containing a2 luxr dna binding domain (np_811094.1) from bacteroides3 thetaiotaomicron vpi-5482 at 2.04 a resolution 34 c2qr4B_ not modelled 8.2 8 PDB header:hydrolase Chain: B: PDB Molecule:peptidase m3b, oligoendopeptidase f; PDBTitle: crystal structure of oligoendopeptidase-f from enterococcus faecium 35 c2jp7A_ not modelled 8.2 21 PDB header:translation Chain: A: PDB Molecule:mrna export factor mex67; PDBTitle: nmr structure of the mex67 uba domain 36 d1f1sa1 not modelled 8.1 21 Fold:alpha/alpha toroid Superfamily:Chondroitin AC/alginate lyase Family:Hyaluronate lyase-like catalytic, N-terminal domain 37 d1s29a_ not modelled 8.1 27 Fold:DNA/RNA-binding 3-helical bundle Superfamily:"Winged helix" DNA-binding domain Family:La domain 38 d1doab_ not modelled 8.0 26 Fold:Immunoglobulin-like beta-sandwich Superfamily:E set domains Family:RhoGDI-like 39 d1r2za1 not modelled 7.9 36 Fold:S13-like H2TH domain Superfamily:S13-like H2TH domain Family:Middle domain of MutM-like DNA repair proteins 40 d1q33a_ not modelled 7.9 12 Fold:Nudix Superfamily:Nudix Family:MutT-like 41 c1bm4A_ not modelled 7.8 38 PDB header:viral protein Chain: A: PDB Molecule:protein (moloney murine leukemia virus capsid); PDBTitle: momlv capsid protein major homology region peptide analog 42 d1vi0a2 not modelled 7.6 15 Fold:Tetracyclin repressor-like, C-terminal domain Superfamily:Tetracyclin repressor-like, C-terminal domain Family:Tetracyclin repressor-like, C-terminal domain 43 d1u7ka_ not modelled 7.4 20 Fold:Retrovirus capsid protein, N-terminal core domain Superfamily:Retrovirus capsid protein, N-terminal core domain Family:Retrovirus capsid protein, N-terminal core domain 44 d1ee8a1 not modelled 7.4 43 Fold:S13-like H2TH domain Superfamily:S13-like H2TH domain Family:Middle domain of MutM-like DNA repair proteins 45 d1j2za_ not modelled 7.3 19 Fold:Single-stranded left-handed beta-helix Superfamily:Trimeric LpxA-like enzymes Family:UDP N-acetylglucosamine acyltransferase 46 d1g9ga_ not modelled 7.2 16 Fold:alpha/alpha toroid Superfamily:Six-hairpin glycosidases Family:Cellulases catalytic domain 47 c2rrfA_ not modelled 7.2 35 PDB header:unknown function Chain: A: PDB Molecule:zinc finger fyve domain-containing protein 21; PDBTitle: the solution structure of the c-terminal region of zinc finger fyve2 domain-containing protein 21 48 c1wyoA_ not modelled 7.1 17 PDB header:structural protein Chain: A: PDB Molecule:microtubule-associated protein rp/eb family PDBTitle: solution structure of the ch domain of human microtubule-2 associated protein rp/eb family member 3 49 d1utga_ not modelled 7.1 18 Fold:Uteroglobin-like Superfamily:Uteroglobin-like Family:Uteroglobin-like 50 d1rm6c1 not modelled 7.0 15 Fold:CO dehydrogenase ISP C-domain like Superfamily:CO dehydrogenase ISP C-domain like Family:CO dehydrogenase ISP C-domain like 51 d2cqka1 not modelled 7.0 33 Fold:DNA/RNA-binding 3-helical bundle Superfamily:"Winged helix" DNA-binding domain Family:La domain 52 c2r8uA_ not modelled 6.9 20 PDB header:cell cycle Chain: A: PDB Molecule:microtubule-associated protein rp/eb family PDBTitle: structure of fragment of human end-binding protein 1 (eb1)2 containing the n-terminal domain at 1.35 a resolution 53 c2p6cB_ not modelled 6.8 19 PDB header:structural genomics, unknown function Chain: B: PDB Molecule:aq_2013 protein; PDBTitle: crystal structure of hypothetical protein aq_2013 from aquifex2 aeolicus vf5. 54 d1i3da_ not modelled 6.6 14 Fold:Globin-like Superfamily:Globin-like Family:Globins 55 d1cb8a1 not modelled 6.5 12 Fold:alpha/alpha toroid Superfamily:Chondroitin AC/alginate lyase Family:Hyaluronate lyase-like catalytic, N-terminal domain 56 c2veqA_ not modelled 6.4 40 PDB header:cell cycle Chain: A: PDB Molecule:centromere dna-binding protein complex cbf3 PDBTitle: insights into kinetochore-dna interactions from the2 structure of cep3p 57 c1x1jA_ not modelled 6.3 23 PDB header:lyase Chain: A: PDB Molecule:xanthan lyase; PDBTitle: crystal structure of xanthan lyase (n194a) with a substrate. 58 d1w6ta2 not modelled 6.1 24 Fold:Enolase N-terminal domain-like Superfamily:Enolase N-terminal domain-like Family:Enolase N-terminal domain-like 59 c3n8bB_ not modelled 6.0 13 PDB header:nucleic acid binding protein Chain: B: PDB Molecule:uncharacterized protein; PDBTitle: crystal structure of borrelia burgdorferi pur-alpha 60 c1rm6F_ not modelled 6.0 16 PDB header:oxidoreductase Chain: F: PDB Molecule:4-hydroxybenzoyl-coa reductase gamma subunit; PDBTitle: structure of 4-hydroxybenzoyl-coa reductase from thauera2 aromatica 61 d1l2la_ not modelled 5.9 36 Fold:Ribokinase-like Superfamily:Ribokinase-like Family:ADP-specific Phosphofructokinase/Glucokinase 62 d1jroa1 not modelled 5.9 16 Fold:CO dehydrogenase ISP C-domain like Superfamily:CO dehydrogenase ISP C-domain like Family:CO dehydrogenase ISP C-domain like 63 d2h8aa1 not modelled 5.8 15 Fold:MAPEG domain-like Superfamily:MAPEG domain-like Family:MAPEG domain 64 c3zvrA_ not modelled 5.8 17 PDB header:hydrolase Chain: A: PDB Molecule:dynamin-1; PDBTitle: crystal structure of dynamin 65 d1m22a_ not modelled 5.8 25 Fold:Amidase signature (AS) enzymes Superfamily:Amidase signature (AS) enzymes Family:Amidase signature (AS) enzymes 66 d1alla_ not modelled 5.7 18 Fold:Globin-like Superfamily:Globin-like Family:Phycocyanin-like phycobilisome proteins 67 d1tw9a1 not modelled 5.7 12 Fold:GST C-terminal domain-like Superfamily:GST C-terminal domain-like Family:Glutathione S-transferase (GST), C-terminal domain 68 c1cb8A_ not modelled 5.6 5 PDB header:lyase Chain: A: PDB Molecule:protein (chondroitinase ac); PDBTitle: chondroitinase ac lyase from flavobacterium heparinum 69 c3nm7D_ not modelled 5.6 13 PDB header:nucleic acid binding protein Chain: D: PDB Molecule:uncharacterized protein; PDBTitle: crystal structure of borrelia burgdorferi pur-alpha 70 c2rddB_ not modelled 5.5 11 PDB header:membrane protein/transport protein Chain: B: PDB Molecule:upf0092 membrane protein yajc; PDBTitle: x-ray crystal structure of acrb in complex with a novel2 transmembrane helix. 71 c1q0wA_ not modelled 5.5 40 PDB header:transport protein Chain: A: PDB Molecule:vacuolar protein sorting-associated protein PDBTitle: solution structure of vps27 amino-terminal uim-ubiquitin2 complex 72 d1n9wa2 not modelled 5.4 21 Fold:Class II aaRS and biotin synthetases Superfamily:Class II aaRS and biotin synthetases Family:Class II aminoacyl-tRNA synthetase (aaRS)-like, catalytic domain 73 d1ccda_ not modelled 5.4 15 Fold:Uteroglobin-like Superfamily:Uteroglobin-like Family:Uteroglobin-like 74 c3snhA_ not modelled 5.3 17 PDB header:endocytosis Chain: A: PDB Molecule:dynamin-1; PDBTitle: crystal structure of nucleotide-free human dynamin1 75 c1k3rA_ not modelled 5.3 19 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:conserved protein mt0001; PDBTitle: crystal structure of the methyltransferase with a knot from2 methanobacterium thermoautotrophicum 76 d1ffva1 not modelled 5.2 9 Fold:CO dehydrogenase ISP C-domain like Superfamily:CO dehydrogenase ISP C-domain like Family:CO dehydrogenase ISP C-domain like 77 d1k1xa1 not modelled 5.1 26 Fold:immunoglobulin/albumin-binding domain-like Superfamily:Families 57/38 glycoside transferase middle domain Family:4-alpha-glucanotransferase, domain 2 78 c3b9yA_ not modelled 5.1 10 PDB header:transport protein Chain: A: PDB Molecule:ammonium transporter family rh-like protein; PDBTitle: crystal structure of the nitrosomonas europaea rh protein